Patents by Inventor ALEX GRAUDENZI

ALEX GRAUDENZI has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11205519
    Abstract: An exemplary embodiment of system, method and computer-accessible medium can be provided to reconstruct models based on the probabilistic notion of causation, which can differ fundamentally from that can be based on correlation. A general reconstruction setting can be complicated by the presence of noise in the data, owing to the intrinsic variability of biological processes as well as experimental or measurement errors. To gain immunity to noise in the reconstruction performance, it is possible to use a shrinkage estimator. On synthetic data, the exemplary procedure can outperform currently known procedures and, for some real cancer datasets, there are biologically significant differences revealed by the exemplary reconstructed progressions. The exemplary system, method and computer accessible medium can be efficient even with a relatively low number of samples and its performance quickly converges to its asymptote as the number of samples increases.
    Type: Grant
    Filed: November 15, 2018
    Date of Patent: December 21, 2021
    Assignees: NEW YORK UNIVERSITY, UNIVERSITA DEGLI STUDI DI MILANO—BICOCCA
    Inventors: Daniele Ramazzotti, Giulio Caravagna, Loes Olde Loohuis, Alex Graudenzi, Ilya Korsuncky, Giancarlo Mauri, Marco Antoniotti, Bhubaneswar Mishra
  • Publication number: 20190326019
    Abstract: An exemplary embodiment of system, method and computer-accessible medium can be provided to reconstruct models based on the probabilistic notion of causation, which can differ fundamentally from that can be based on correlation. A general reconstruction setting can be complicated by the presence of noise in the data, owing to the intrinsic variability of biological processes as well as experimental or measurement errors. To gain immunity to noise in the reconstruction performance, it is possible to use a shrinkage estimator. On synthetic data, the exemplary procedure can outperform currently known procedures and, for some real cancer datasets, there are biologically significant differences revealed by the exemplary reconstructed progressions. The exemplary system, method and computer accessible medium can be efficient even with a relatively low number of samples and its performance quickly converges to its asymptote as the number of samples increases.
    Type: Application
    Filed: November 15, 2018
    Publication date: October 24, 2019
    Inventors: Daniele Ramazzotti, Giulio Caravagna, Loes Olde Loohuis, Alex Graudenzi, IIya Korsuncky, Giancarlo Mauri, Marco Antoniotti, Bhubaneswar Mishra
  • Publication number: 20160300036
    Abstract: An exemplary embodiment of system, method and computer-accessible medium can be provided to reconstruct models based on the probabilistic notion of causation, which can differ fundamentally from that can be based on correlation. A general reconstruction setting can be complicated by the presence of noise in the data, owing to the intrinsic variability of biological processes as well as experimental or measurement errors. To gain immunity to noise in the reconstruction performance, it is possible to use a shrinkage estimator. On synthetic data, the exemplary procedure can outperform currently known procedures and, for some real cancer datasets, there are biologically significant differences revealed by the exemplary reconstructed progressions. The exemplary system, method and computer accessible medium can be efficient even with a relatively low number of samples and its performance quickly converges to its asymptote as the number of samples increases.
    Type: Application
    Filed: October 28, 2014
    Publication date: October 13, 2016
    Inventors: DANIELE RAMAZZOTTI, GIULIO CARAVAGNA, LOES OLDE LOOHUIS, ALEX GRAUDENZI, IIYA KORSUNCKY, GIANCARLO MAURI, MARCO CH, BHUBANESWAR MISHRA