Patents by Inventor Ali Kamen

Ali Kamen has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20190371450
    Abstract: For decision support in a medical therapy, machine learning provides a machine-learned generator for generating a prediction of outcome for therapy personalized to a patient. Deep learning may result in features more predictive of outcome than handcrafted features. More comprehensive learning may be provided by using multi-task learning where one of the tasks (e.g., segmentation, non-image data, and/or feature extraction) is unsupervised and/or draws on a greater number of training samples than available for outcome prediction alone.
    Type: Application
    Filed: February 8, 2019
    Publication date: December 5, 2019
    Inventors: Bin Lou, Ali Kamen
  • Patent number: 10496729
    Abstract: A method and system for estimating tissue parameters of a computational model of organ function and their uncertainty due to model assumptions, data noise and optimization limitations is disclosed. As applied to a cardiac use-case, a patient-specific anatomical heart model is generated from medical image data of a patient. A patient-specific computational heart model is generated based on the patient-specific anatomical heart model. Patient-specific parameters and corresponding uncertainty values are estimated for at least a subset of parameters of the patient-specific computational heart model. A surrogate model is estimated for a forward model of cardiac function, and the surrogate model is applied within Bayesian inference to estimate the posterior probability density function of the parameter space of the forward model. Cardiac function for the patient is simulated using the patient-specific computational heart model.
    Type: Grant
    Filed: February 24, 2015
    Date of Patent: December 3, 2019
    Inventors: Dominik Neumann, Tommaso Mansi, Bogdan Georgescu, Ali Kamen, Dorin Comaniciu
  • Patent number: 10485510
    Abstract: A processor acquires image data from a medical imaging system. The processor generates a first model from the image data. The processor generates a computational model which includes cardiac electrophysiology and cardiac mechanics estimated from the first model. The processor performs tests on the computational model to determine outcomes for therapies. The processor overlays the outcome on an interventional image. Using interventional imaging, the first heart model may be updated/overlaid during the therapy to visualize its effect on a patient's heart.
    Type: Grant
    Filed: September 4, 2015
    Date of Patent: November 26, 2019
    Assignee: Siemens Healthcare GmbH
    Inventors: Tommaso Mansi, Tiziano Passerini, Bogdan Georgescu, Ali Kamen, Helene C. Houle, Alexander Brost, Dorin Comaniciu
  • Patent number: 10489908
    Abstract: A method and apparatus for automated prostate tumor detection and classification in multi-parametric magnetic resonance imaging (MRI) is disclosed. A multi-parametric MRI image set of a patient, including a plurality of different types of MRI images, is received. Simultaneous detection and classification of prostate tumors in the multi-parametric MRI image set of the patient are performed using a trained multi-channel image-to-image convolutional encoder-decoder that inputs multiple MRI images of the multi-parametric MRI image set of the patient and includes a plurality of output channels corresponding to a plurality of different tumor classes. For each output channel, the trained image-to image convolutional encoder-decoder generates a respective response map that provides detected locations of prostate tumors of the corresponding tumor class in the multi-parametric MRI image set of the patient.
    Type: Grant
    Filed: December 5, 2017
    Date of Patent: November 26, 2019
    Assignee: Siemens Healthcare GmbH
    Inventors: Atilla Peter Kiraly, Clement Jad Abi Nader, Robert Grimm, Berthold Kiefer, Ali Kamen
  • Patent number: 10483005
    Abstract: Methods and systems for estimating patient-specific cardiac electrical properties from medical image data and non-invasive electrocardiography measurements of a patient are disclosed. A patient-specific anatomical heart model is generated from medical image data of a patient. Patient-specific cardiac electrical properties are estimated by simulating cardiac electrophysiology over time in the patient-specific anatomical heart model using a computational cardiac electrophysiology model and adjusting cardiac electrical parameters based on the simulation results and the non-invasive electrocardiography measurements. A patient-specific cardiac electrophysiology model with the patient-specific cardiac electrical parameters can then be used to perform virtual cardiac electrophysiology interventions for planning and guidance of cardiac electrophysiology interventions.
    Type: Grant
    Filed: October 17, 2018
    Date of Patent: November 19, 2019
    Assignee: Siemens Healthcare GmbH
    Inventors: Philipp Seegerer, Tommaso Mansi, Marie-Pierre Jolly, Bogdan Georgescu, Ali Kamen, Dorin Comaniciu, Roch Mollero, Tiziano Passerini
  • Patent number: 10482313
    Abstract: A method and system for classification of endoscopic images is disclosed. An initial trained deep network classifier is used to classify endoscopic images and determine confidence scores for the endoscopic images. The confidence score for each endoscopic image classified by the initial trained deep network classifier is compared to a learned confidence threshold. For endoscopic images with confidence scores higher than the learned threshold value, the classification result from the initial trained deep network classifier is output. Endoscopic images with confidence scores lower than the learned confidence threshold are classified using a first specialized network classifier built on a feature space of the initial trained deep network classifier.
    Type: Grant
    Filed: September 29, 2016
    Date of Patent: November 19, 2019
    Assignee: Siemens Healthcare GmbH
    Inventors: Venkatesh N. Murthy, Vivek Kumar Singh, Shanhui Sun, Subhabrata Bhattacharya, Kai Ma, Ali Kamen, Bogdan Georgescu, Terrence Chen, Dorin Comaniciu
  • Patent number: 10402535
    Abstract: A method and system for personalized computation of tissue ablation extent based on medical images of a patient is disclosed. A patient-specific anatomical model of the liver and liver vessels is estimated from medical image data of a patient. Blood flow in the liver and liver vessels is simulated. An ablation simulation is performed that uses a bio-heat model to simulate heat diffusion due to an ablation based on the simulated blood flow and a cellular necrosis model to simulate cellular necrosis in the liver based on the simulated heat diffusion. Personalized tissue parameters of the bio-heat model and the cellular necrosis model are estimated based on observed results of a preliminary ablation procedure. Planning of the ablation procedure is then performed using the personalized bio-heat equation and the cellular necrosis model. The model can be subsequently refined as more ablation observations are obtained.
    Type: Grant
    Filed: February 13, 2015
    Date of Patent: September 3, 2019
    Assignees: Siemens Healthcare GmbH, Institut National de Recherche en Informatique et en Automatique
    Inventors: Chloe Audigier, Tommaso Mansi, Saikiran Rapaka, Ali Kamen, Viorel Mihalef, Herve Delingette, Nicholas Ayache, Dorin Comaniciu
  • Patent number: 10373700
    Abstract: A method and system for non-invasive assessment of coronary artery stenosis is disclosed. Patient-specific anatomical measurements of the coronary arteries are extracted from medical image data of a patient acquired during rest state. Patient-specific rest state boundary conditions of a model of coronary circulation representing the coronary arteries are calculated based on the patient-specific anatomical measurements and non-invasive clinical measurements of the patient at rest. Patient-specific rest state boundary conditions of the model of coronary circulation representing the coronary arteries are calculated based on the patient-specific anatomical measurements and non-invasive clinical measurements of the patient at rest. Hyperemic blood flow and pressure across at least one stenosis region of the coronary arteries are simulated using the model of coronary circulation and the patient-specific hyperemic boundary conditions.
    Type: Grant
    Filed: March 11, 2013
    Date of Patent: August 6, 2019
    Assignee: Siemens Healthcare GmbH
    Inventors: Puneet Sharma, Lucian Mihai Itu, Ali Kamen, Bogdan Georgescu, Xudong Zheng, Huseyin Tek, Dorin Comaniciu, Dominik Bernhardt, Fernando Vega-Higuera, Michael Scheuering
  • Patent number: 10368850
    Abstract: Systems and methods are provided for utilizing an MRI image and real-time an ultrasound images to guide and/or restrict the movement of an ultrasound probe in position for collecting a biopsy core. A real-time ultrasound image is acquired and fused with pre-operative imaging modalities, such as an MRI image, to provide a three-dimensional model of the prostate. A multi-link robotic arm is provided with an end-effector and an ultrasound probe mounted thereto. Sensor information is used to track the ultrasound probe position with respect to the 3D model. The robotic arm allows for the implementation of a virtual remote center of motion (VRCM) about the transrectal probe tip, an adjustable compliant mode for the physician triggered movement of probe, a restrictive trajectory of joints of the robotic arm and active locking for stationary imaging of the prostate.
    Type: Grant
    Filed: June 18, 2015
    Date of Patent: August 6, 2019
    Assignee: Siemens Medical Solutions USA, Inc.
    Inventors: Ali Kamen, John Benson, Richard Chiao, Dorin Comaniciu, Ankur Kapoor, Yuehaw Khoo, Andrzej Milkowski
  • Patent number: 10354744
    Abstract: A method and system for non-invasive assessment of coronary artery stenosis is disclosed. Patient-specific anatomical measurements of the coronary arteries are extracted from medical image data of a patient acquired during rest state. Patient-specific rest state boundary conditions of a model of coronary circulation representing the coronary arteries are calculated based on the patient-specific anatomical measurements and non-invasive clinical measurements of the patient at rest. Patient-specific rest state boundary conditions of the model of coronary circulation representing the coronary arteries are calculated based on the patient-specific anatomical measurements and non-invasive clinical measurements of the patient at rest. Hyperemic blood flow and pressure across at least one stenosis region of the coronary arteries are simulated using the model of coronary circulation and the patient-specific hyperemic boundary conditions.
    Type: Grant
    Filed: November 4, 2013
    Date of Patent: July 16, 2019
    Assignee: Siemens Healthcare GmbH
    Inventors: Puneet Sharma, Michael Scheuering, Lucian Mihai Itu, Ali Kamen, Bogdan Georgescu, Xudong Zheng, Huseyin Tek, Dorin Comaniciu, Dominik Bernhardt, Fernando Vega-Higuera
  • Patent number: 10342620
    Abstract: A method for guiding electrophysiology (EP) intervention using a patient-specific electrophysiology model includes acquiring a medical image of a patient subject (S201). Sparse EP signals are acquired over an anatomy using the medical image for guidance (S202). The sparse EP signals are interpolated using a patient specific computational electrophysiology model and a three-dimensional model of EP dynamics is generated therefrom (S203). A rendering of the three-dimensional model is displayed. Candidate intervention sites are received, effects on the EP dynamics resulting from intervention at the candidate intervention sites is simulated using the model, and a rendering of the model showing the simulated effects is displayed (S205).
    Type: Grant
    Filed: April 9, 2015
    Date of Patent: July 9, 2019
    Assignee: Siemens Healthcare GmbH
    Inventors: Atilla Peter Kiraly, Tommaso Mansi, Ali Kamen
  • Publication number: 20190200880
    Abstract: A method and system for determining fractional flow reserve (FFR) for a coronary artery stenosis of a patient is disclosed. In one embodiment, medical image data of the patient including the stenosis is received, a set of features for the stenosis is extracted from the medical image data of the patient, and an FFR value for the stenosis is determined based on the extracted set of features using a trained machine-learning based mapping. In another embodiment, a medical image of the patient including the stenosis of interest is received, image patches corresponding to the stenosis of interest and a coronary tree of the patient are detected, an FFR value for the stenosis of interest is determined using a trained deep neural network regressor applied directly to the detected image patches.
    Type: Application
    Filed: March 4, 2019
    Publication date: July 4, 2019
    Inventors: Puneet Sharma, Ali Kamen, Bogdan Georgescu, Frank Sauer, Dorin Comaniciu, Yefeng Zheng, Hien Nguyen, Vivek Kumar Singh
  • Patent number: 10335238
    Abstract: A method and system for patient-specific simulation of cardiac electrophysiology is disclosed. A patient-specific anatomical heart model is generated from medical image data of a patient. A patient-specific cardiac electrophysiology model is generated based on simulated torso potentials and body surface potential measurements of the patient. Cardiac electrophysiology of the patient is simulated over time for the patient-specific anatomical heart model using the patient-specific electrophysiology model. One or more electrophysiology maps are generated based on the cardiac electrophysiology simulated using the patient-specific cardiac electrophysiology model.
    Type: Grant
    Filed: March 27, 2015
    Date of Patent: July 2, 2019
    Assignee: Siemens Healthcare GmbH
    Inventors: Ali Kamen, Tommaso Mansi, Tiziano Passerini, Bogdan Georgescu, Saikiran Rapaka, Dorin Comaniciu, Gabriel Haras
  • Publication number: 20190195774
    Abstract: The present invention relates to an improved method for marker-free detection of a cell type of at least one cell in a medium using microfluidics and digital holographic microscopy, as well as a device, particular for carrying out the method.
    Type: Application
    Filed: January 26, 2017
    Publication date: June 27, 2019
    Inventors: Noha Youssry El-Zehiry, Oliver Hayden, Ali Kamen, Lukas Richter, Manfred Stanzel, Matthias Ugele, Daniela Seidel, Gaby Marquardt, Oliver Schmidt
  • Publication number: 20190197199
    Abstract: A method and system for patient-specific planning of cardiac therapy, such as cardiac resynchronization therapy (CRT), based on preoperative clinical data and medical images, such as ECG data, magnetic resonance imaging (MRI) data, and ultrasound data, is disclosed. A patient-specific anatomical model of the left and right ventricles is generated from medical image data of a patient. A patient-specific computational heart model, which comprises cardiac electrophysiology, biomechanics and hemodynamics, is generated based on the patient-specific anatomical model of the left and right ventricles and clinical data. Simulations of cardiac therapies, such as CRT at one or more anatomical locations are performed using the patient-specific computational heart model. Changes in clinical cardiac parameters are then computed from the patient-specific model, constituting predictors of therapy outcome useful for therapy planning and optimization.
    Type: Application
    Filed: January 30, 2013
    Publication date: June 27, 2019
    Applicants: Siemens Aktiengesellschaft, Siemens Corporation
    Inventors: Tommaso Mansi, Bogdan Georgescu, Xudong Zheng, Ali Kamen, Dorin Comaniciu
  • Patent number: 10325686
    Abstract: A system operating in a plurality of modes to provide an integrated analysis of molecular data, imaging data, and clinical data associated with a patient includes a multi-scale model, a molecular model, and a linking component. The multi-scale model is configured to generate one or more estimated multi-scale parameters based on the clinical data and the imaging data when the system operates in a first mode, and generate a model of organ functionality based on one or more inferred multi-scale parameters when the system operates in a second mode. The molecular model is configured to generate one or more first molecular findings based on a molecular network analysis of the molecular data, wherein the molecular model is constrained by the estimated parameters when the system operates in the first mode.
    Type: Grant
    Filed: June 27, 2013
    Date of Patent: June 18, 2019
    Assignees: Siemens Healthcare GmbH, SIEMENS AG OSTERREICH
    Inventors: Tommaso Mansi, Wei Keat Lim, Vanessa King, Andreas Kremer, Bogdan Georgescu, Xudong Zheng, Ali Kamen, Andreas Keller, Cord Friedrich Staehler, Emil Wirsz, Dorin Comaniciu
  • Patent number: 10311978
    Abstract: A method and system for patient-specific planning of cardiac therapy, such as cardiac resynchronization therapy (CRT), based on preoperative clinical data and medical images, such as ECG data, magnetic resonance imaging (MRI) data, and ultrasound data, is disclosed. A patient-specific anatomical model of the left and right ventricles is generated from medical image data of a patient. A patient-specific computational heart model, which comprises cardiac electrophysiology, biomechanics and hemodynamics, is generated based on the patient-specific anatomical model of the left and right ventricles and clinical data. Simulations of cardiac therapies, such as CRT at one or more anatomical locations are performed using the patient-specific computational heart model. Changes in clinical cardiac parameters are then computed from the patient-specific model, constituting predictors of therapy outcome useful for therapy planning and optimization.
    Type: Grant
    Filed: January 30, 2013
    Date of Patent: June 4, 2019
    Assignee: Siemens Healthcare GmbH
    Inventors: Tommaso Mansi, Bogdan Georgescu, Xudong Zheng, Ali Kamen, Dorin Comaniciu
  • Patent number: 10299862
    Abstract: A medical system is provided for three-dimensional hemodynamic quantification. Comprehensive three-dimensional (3D) plus time (3D+t) assessment of flow patterns inside the heart are provided by a combination of lumped-parameter modeling and computational flow dynamic modeling. Using medical scanning, the lumped parameter model is personalized to a given patient. The personalized lumped-parameter model provides pressure curves (i.e., pressure as a function of time) for one or more locations. Using geometry of the patients heart segmented from the medical scanning and the pressure curves as boundary conditions, the computational flow dynamics model calculates the absolute pressure for any location (e.g., for a three-dimensional field of locations) in the patient heart at any one or more phases of the cardiac cycle. More accurate absolute pressure may be provided without invasive measurement.
    Type: Grant
    Filed: February 5, 2016
    Date of Patent: May 28, 2019
    Assignee: Siemens Healthcare GmbH
    Inventors: Bogdan Georgescu, Lucian Mihai Itu, Ali Kamen, Tommaso Mansi, Viorel Mihalef, Tiziano Passerini, Rapaka Saikiran, Puneet Sharma
  • Patent number: 10296707
    Abstract: A method and system for image-based patient-specific guidance of cardiac arrhythmia therapies is disclosed. A patient-specific anatomical heart model is generated from medical image data of a patient. A patient-specific cardiac electrophysiology model is generated based on the patient-specific anatomical heart model and electrophysiology measurements of the patient. One or more virtual electrophysiological interventions are performed using the patient-specific cardiac electrophysiology model. One or more pacing targets or ablation targets based on the one or more virtual electrophysiological interventions are displayed.
    Type: Grant
    Filed: April 10, 2015
    Date of Patent: May 21, 2019
    Assignee: Siemens Healthcare GmbH
    Inventors: Tiziano Passerini, Tommaso Mansi, Ali Kamen, Bogdan Georgescu, Dorin Comaniciu
  • Patent number: 10296809
    Abstract: A method and system for patient-specific cardiac electrophysiology is disclosed. Particularly, a patient-specific anatomical model of a heart is generated from medical image data of a patient, a level-set representation of the patient-specific anatomical model is generated of the heart on a Cartesian grid; and a transmembrane action potential at each node of the level-set representation of the of the patient-specific anatomical model of the heart is computed on a Cartesian grid.
    Type: Grant
    Filed: February 28, 2013
    Date of Patent: May 21, 2019
    Assignee: Siemens Healthcare GmbH
    Inventors: Saikiran Rapaka, Tommaso Mansi, Bogdan Georgescu, Ali Kamen, Dorin Comaniciu