Patents by Inventor Andreas W. Schirmer

Andreas W. Schirmer has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20230332193
    Abstract: The disclosure relates to a non-natural flavin-dependent oxidase comprising at least one amino acid variation as compared to a wild type flavin-dependent oxidase, wherein the non-natural flavin-dependent oxidase does not comprise a disulfide bond, and wherein the non-natural flavin-dependent oxidase is capable of oxidative cyclization of a prenylated aromatic compound into a cannabinoid. The disclosure also relates to a nucleic acid, an expression construct, and an engineered cell for making the non-natural flavin-dependent oxidase. Also provided are compositions comprising the non-natural flavin-dependent oxidase; isolated non-natural flavin-dependent oxidase and methods of making the same; cell extracts comprising the non-natural flavin-dependent oxidase; and methods of making cannabinoids.
    Type: Application
    Filed: September 1, 2021
    Publication date: October 19, 2023
    Inventors: Andreas W. SCHIRMER, Deqiang ZHANG, Jamison Parker HUDDLESTON
  • Publication number: 20230167419
    Abstract: The disclosure relates to omega-hydroxylase-related fusion polypeptides that result in improved omega-hydroxylated fatty acid derivative production when expressed in recombinant host cells. The disclosure further relates to microorganisms for ex pressing the omega-hydroxylase-related fusion polypeptides for the production of omega-hydroxylated fatty acid derivatives.
    Type: Application
    Filed: August 8, 2022
    Publication date: June 1, 2023
    Inventors: Baolong ZHU, Andreas W. Schirmer, Cindy Chang
  • Patent number: 11441130
    Abstract: The disclosure relates to omega-hydroxylase-related fusion polypeptides that result in improved omega-hydroxylated fatty acid derivative production when expressed in recombinant host cells. The disclosure further relates to microorganisms for expressing the omega-hydroxylase-related fusion polypeptides for the production of omega-hydroxylated fatty acid derivatives.
    Type: Grant
    Filed: June 16, 2015
    Date of Patent: September 13, 2022
    Assignee: Genomatica, Inc.
    Inventors: Baolong Zhu, Andreas W. Schirmer, Cindy Chang
  • Publication number: 20220267813
    Abstract: The disclosure relates to fatty diols and recombinant microorganisms for producing them. More particularly, the disclosure relates to recombinant microorganisms engineered to produce fatty diols via fermentation. Further encompassed is a process that uses the microorganisms to produce fatty diols from a simple carbon source.
    Type: Application
    Filed: April 29, 2022
    Publication date: August 25, 2022
    Inventors: Andreas W. SCHIRMER, Noah HELMAN, Haibo WANG, Zhihao HU, Vikranth ARLAGADDA, Alma Itzel RAMOS-SOLIS, Elizabeth CLARKE
  • Patent number: 11421206
    Abstract: The disclosure relates to omega-hydroxylase-related fusion polypeptides that result in improved omega-hydroxylated fatty acid derivative production when expressed in recombinant host cells. The disclosure further relates to microorganisms for expressing the omega-hydroxylase-related fusion polypeptides for the production of omega-hydroxylated fatty acid derivatives.
    Type: Grant
    Filed: October 23, 2019
    Date of Patent: August 23, 2022
    Assignee: Genomatica, Inc.
    Inventors: Baolong Zhu, Andreas W. Schirmer, Cindy Chang
  • Publication number: 20220259623
    Abstract: Compositions and methods for producing aldehydes, alkanes, and alkenes are described herein. The aldehydes, alkanes, and alkenes can be used in biofuels.
    Type: Application
    Filed: October 22, 2021
    Publication date: August 18, 2022
    Inventors: Andreas W. SCHIRMER, Mathew A. RUDE, Shane A. BRUBAKER
  • Patent number: 11359216
    Abstract: The disclosure relates to fatty diols and recombinant microorganisms for producing them. More particularly, the disclosure relates to recombinant microorganisms engineered to produce fatty diols via fermentation. Further encompassed is a process that uses the microorganisms to produce fatty diols from a simple carbon source.
    Type: Grant
    Filed: June 1, 2020
    Date of Patent: June 14, 2022
    Assignee: Genomatica, Inc.
    Inventors: Andreas W. Schirmer, Noah Helman, Haibo Wang, Zhihao Hu, Vikranth Arlagadda, Alma Itzel Ramos-Solis, Elizabeth Clarke
  • Publication number: 20220064684
    Abstract: The disclosure relates to methods for the production of natural lactones by bacteria under physiological conditions. The methods employ ybgC proteins having lactonizing activity.
    Type: Application
    Filed: January 15, 2020
    Publication date: March 3, 2022
    Inventors: Andreas W. SCHIRMER, Katherine Ann MURPHY, Angelica Zabala BAUTISTA
  • Patent number: 11186854
    Abstract: Compositions and methods for producing aldehydes, alkanes, and alkenes are described herein. The aldehydes, alkanes, and alkenes can be used in biofuels.
    Type: Grant
    Filed: January 7, 2020
    Date of Patent: November 30, 2021
    Assignee: Genomatica, Inc.
    Inventors: Andreas W. Schirmer, Mathew A. Rude, Shane A. Brubaker
  • Publication number: 20210348173
    Abstract: The disclosure relates to recombinant host cells including strain modifications effective to improve titer, yield and/or productivity of fatty acid derivatives. The disclosure further relates to cell cultures including the recombinant host cells for the fermentative production of fatty acid derivatives and compositions thereof.
    Type: Application
    Filed: June 1, 2021
    Publication date: November 11, 2021
    Inventors: Derek L. GREENFIELD, Andreas W. SCHIRMER, Elizabeth J. CLARKE, Eli S. GROBAN, Bernardo M. DA COSTA, Zhihao HU, Kevin HOLDEN, Noah HELMAN
  • Publication number: 20210324431
    Abstract: Recombinant microbial cells are provided which have been engineered to produce fatty acid derivatives having linear chains containing an odd number of carbon atoms by the fatty acid biosynthetic pathway. Also provided are methods of making odd chain fatty acid derivatives using the recombinant microbial cells, and compositions comprising odd chain fatty acid derivatives produced by such methods.
    Type: Application
    Filed: February 8, 2021
    Publication date: October 21, 2021
    Inventors: Grace J. LEE, John HALIBURTON, Zhihao HU, Andreas W. SCHIRMER, Kevin HOLDEN
  • Patent number: 11142756
    Abstract: The disclosure relates to acetyl-CoA carboxylase (ACC) variants and host cells expressing them for the production of malonyl-CoA derived compounds including fatty acid derivatives. Further contemplated are methods of producing increased amounts of malonyl-CoA derived compounds and related cell cultures.
    Type: Grant
    Filed: February 26, 2020
    Date of Patent: October 12, 2021
    Assignee: Genomatica, Inc.
    Inventors: Derek L. Greenfield, Donald E. Trimbur, Andreas W. Schirmer, Cindy Chang, Behnaz Behrouzian, Jessica Winger
  • Publication number: 20210310033
    Abstract: The present disclosure relates to processes that combine microbial production of organic intermediates and subsequent synthetic transformation to provide compounds of industrial value, including compounds used in fragrances.
    Type: Application
    Filed: April 13, 2021
    Publication date: October 7, 2021
    Inventors: Stephen B. DEL CARDAYRE, Andreas W. SCHIRMER, Myong KO, Haibo WANG
  • Patent number: 11060099
    Abstract: The invention relates to compositions and methods, including polynucleotide sequences, amino acid sequences, recombinant host cells and recombinant host cell cultures engineered to produce fatty acid derivative compositions comprising fatty acids, fatty alcohols, fatty aldehydes, fatty esters, alkanes, terminal olefins, internal olefins or ketones. The fatty acid derivative composition is produced extracellularly with a higher titer, yield or productivity than the corresponding wild type or non-engineered host cell.
    Type: Grant
    Filed: July 14, 2017
    Date of Patent: July 13, 2021
    Assignee: Genomatica, Inc.
    Inventors: Derek L. Greenfield, Andreas W. Schirmer, Elizabeth J. Clarke, Eli S. Groban, Bernardo M. Da Costa, Zhihao Hu, Kevin Holden, Noah Helman
  • Publication number: 20210189439
    Abstract: The disclosure relates to the field of specialty chemicals and methods for their synthesis. In embodiments, the disclosure provides novel multifunctional fatty acid derivative molecules such as e.g., fatty triols, fatty tetrols, dihydroxy fatty acids, etc. The disclosure further provides derivatives of the disclosed multifunctional molecules which are useful e.g., in the production of personal care products, surfactants, detergents, polymers, paints, coatings, and as emulsifiers, emollients, and thickeners in cosmetics and foods, as industrial solvents and plasticizers, etc. The disclosure further provides biochemical pathways, recombinant microorganisms and methods for the biological production of various multifunctional fatty acid derivatives.
    Type: Application
    Filed: May 3, 2019
    Publication date: June 24, 2021
    Applicant: Genomatica, Inc.
    Inventors: Andreas W. SCHIRMER, Risha Lindig BOND, Erin Frances PERRY
  • Publication number: 20210189373
    Abstract: The disclosure relates to the field of specialty chemicals and methods for their synthesis. In embodiments, the disclosure provides viable bacterial cells which comprise heterologous dual 3-hydroxy-acyl-ACP dehydratase/isomerases, etc. The disclosure further provides monounsaturated fatty acid derivative molecules produced by the viable bacterial cells which are non-native to the bacterial cells. The disclosure further provides methods for the preparation and production of non-native monounsaturated fatty acid derivative molecules such as e.g., an ?3-monounsaturated fatty acid derivative, an ?5-monounsaturated fatty acid derivative, an ?9-monounsaturated fatty acid derivative, an ?11-monounsaturated fatty acid fatty acid derivative, etc.
    Type: Application
    Filed: August 28, 2019
    Publication date: June 24, 2021
    Inventors: Andreas W. SCHIRMER, Katherine Ann MURPHY, Erin Frances PERRY
  • Patent number: 11008597
    Abstract: The present disclosure relates to processes that combine microbial production of organic intermediates and subsequent synthetic transformation to provide compounds of industrial value, including compounds used in fragrances.
    Type: Grant
    Filed: April 10, 2015
    Date of Patent: May 18, 2021
    Assignee: Genomatica, Inc.
    Inventors: Stephen B. Del Cardayre, Andreas W. Schirmer, Myong Ko, Haibo Wang
  • Publication number: 20210071212
    Abstract: The disclosure relates to omega-hydroxylated fatty acid derivatives and methods of producing them. Herein, the disclosure encompasses a novel and environmentally friendly production method that provides omega-hydroxylated fatty acid derivatives at high purity and yield. Further encompassed are recombinant microorganisms that produce omega-hydroxylated fatty acid derivatives through selective fermentation.
    Type: Application
    Filed: June 29, 2020
    Publication date: March 11, 2021
    Applicant: Genomatica, Inc.
    Inventors: Andreas W. Schirmer, Haibo Wang, Stephen B. Del Cardayre, Zhihao Hu, Louis G. Hom, Baolong Zhu, Cindy Chang, Emanuela E. Popova
  • Publication number: 20210071207
    Abstract: The disclosure relates to fatty diols and recombinant microorganisms for producing them. More particularly, the disclosure relates to recombinant microorganisms engineered to produce fatty diols via fermentation. Further encompassed is a process that uses the microorganisms to produce fatty diols from a simple carbon source.
    Type: Application
    Filed: June 1, 2020
    Publication date: March 11, 2021
    Applicant: Genomatica, Inc.
    Inventors: Andreas W. Schirmer, Noah HELMAN, Haibo Wang, Zhihao Hu, Vikranth Arlagadda, Alma Itzel RAMOS-SOLIS, Elizabeth Clarke
  • Publication number: 20210040514
    Abstract: Compositions and methods for producing aldehydes, alkanes, and alkenes are described herein. The aldehydes, alkanes, and alkenes can be used in biofuels.
    Type: Application
    Filed: January 7, 2020
    Publication date: February 11, 2021
    Applicant: Genomatica, Inc.
    Inventors: Andreas W. Schirmer, Mathew A. Rude, Shane A. BRUBAKER