Patents by Inventor David A. Baker

David A. Baker has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20240044895
    Abstract: The present invention is directed to peptides for use in the detection of antibodies against SARS-CoV-2, which are indicative of past SARS-CoV-2 infections. Additionally, assays and methods of distinguishing patients having had a prior infection from those vaccinated patients are also provided. Additionally, vaccine compositions for use in eliciting anti-SARS-CoV-2 immune response are provided along with methods of producing antibodies and methods of eliciting an immune response.
    Type: Application
    Filed: September 20, 2021
    Publication date: February 8, 2024
    Inventors: Irene ONG, David O’CONNOR, Miriam SHELEF, Anna HEFFRON, David BAKER, Maya AMJADI, Sean MCILWAIN, Saniya KHULLAR
  • Publication number: 20240038331
    Abstract: Synthetic nanostructures, proteins that are useful, for example, in making synthetic nanostructures, and methods for designing such synthetic nanostructures are disclosed herein.
    Type: Application
    Filed: September 1, 2023
    Publication date: February 1, 2024
    Inventors: David BAKER, Neil KING, Jacob BALE, William SHEFFLER
  • Publication number: 20240029824
    Abstract: Disclosed are polypeptides having an amino acid sequence at least 70%, 75%, 80%, 85%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99%, or 100% identical to the amino acid sequence selected from the group consisting of the amino acid sequences listed in Tables 1, 2, and 3, and heteropolymers formed from such polypeptides.
    Type: Application
    Filed: May 2, 2023
    Publication date: January 25, 2024
    Inventors: David BAKER, Sherry BERMEO, Andrew FAVOR, Scott BOYKEN, Yang HSIA
  • Patent number: 11877694
    Abstract: A cooking accessory insert for a cooking grill includes a heat distribution duct that, installed, extends from a burner proximate to the bottom of the grill's fire box generally to a cooking level near the top of the fire box. The heat distribution duct is defined by a plurality of side walls extending from a top end of the heat distribution duct to a bottom end, tapering inward, or narrowing, from top to bottom. A top surface substantially covers the top end of the heat distribution duct, while the bottom is open. A cover is provided to cover the top surface, defining a baking chamber between the cover and the top surface. A cooking surface element such as a pizza stone is removably disposed on the top surface, spaced apart from the top surface by a plurality of spacers.
    Type: Grant
    Filed: October 2, 2020
    Date of Patent: January 23, 2024
    Assignee: GMG Products, LLC
    Inventor: David Baker
  • Publication number: 20240016230
    Abstract: An aerosol provision system includes an aerosol generator configured to aerosolize an aerosol-generating material. The aerosol provision system also includes a sensor configured to detect an inhalation on the aerosol provision system by a user of the aerosol provision system, and output corresponding inhalation detection signals to control circuitry. The control circuitry is configured to determine an indication of an amount of an ingredient delivered from the aerosol generating material to the user during the inhalation based on the inhalation detection signals, compare the indication of the amount of the ingredient delivered to a threshold, and provide a notification to the user based on the comparison between the indication of the amount of the ingredient delivered to the threshold.
    Type: Application
    Filed: July 6, 2021
    Publication date: January 18, 2024
    Inventors: Nicholas ROSSER, Connor BRUTON, Charanjit NANDRA, David RUSHFORTH, David BAKER, Robert KERSEY, Mark CROSIER
  • Publication number: 20240010687
    Abstract: Polypeptides that comprise axle or ring components of protein nanomachines, and kits and nanomachines including such polypeptides are disclosed herein.
    Type: Application
    Filed: September 12, 2022
    Publication date: January 11, 2024
    Inventors: David Baker, Alexis Courbet, Jesse Hansen, Yang Hsia, Neville Bethel, Justin Kollman
  • Publication number: 20240013853
    Abstract: Polypeptide are providing that are at least 50% identical to the amino acid sequence selected from the group consisting of SEQ ID NOS:1-37, cyclic homo-oligomers of the polypeptides, and uses thereof.
    Type: Application
    Filed: July 7, 2023
    Publication date: January 11, 2024
    Inventors: David BAKER, Basile WICKY, Lukas MILLES, Alexis COURBET, Robert RAGOTTE, Elias KINFU, Sam TIPPS, Justas DAUPARAS, Ryan KIBLER
  • Patent number: 11866699
    Abstract: The application discloses multimeric assemblies packaging one or more active component and their use to carry out nucleic acid regulation or gene editing.
    Type: Grant
    Filed: February 12, 2018
    Date of Patent: January 9, 2024
    Assignee: UNIVERSITY OF WASHINGTON
    Inventors: Marc Joseph Lajoie, Elizabeth Erin Gray, Neil P. King, Daniel Brewster Stetson, David Baker, Katherine DaPron
  • Publication number: 20230416726
    Abstract: De novo designed proteins with binding activity are disclosed, which were designed starting from a desired functional site and jointly filling in the missing sequence and structure needed to complete the protein, and uses of the binding proteins.
    Type: Application
    Filed: June 22, 2023
    Publication date: December 28, 2023
    Inventors: David BAKER, Jue WANG, Robert RAGOTTE, Lukas MILLES, Joseph L. WATSON, David JUERGENS, Sidney LISANZA, Amijai SARAGOVI, Wei YANG, Derrick HICKS, Douglas TISCHER, Thomas SCHLICHTHAERLE
  • Publication number: 20230374075
    Abstract: Cyclic peptides including the amino acid sequence selected from SEQ ID NO:1-6, multimers thereof, and metal organic frameworks including the cyclic peptides or multimers thereof are provided.
    Type: Application
    Filed: May 17, 2023
    Publication date: November 23, 2023
    Inventors: David Baker, Ryanne Ballard, Asim Bera, Christine Kang, Alex Kang, Xinting Li, Hannah Nguyen, Meerit Said, Patrick Salveson, William H. Sheffler, Shunzhi Wang
  • Patent number: 11820800
    Abstract: Disclosed herein are designed heterodimer proteins, monomeric polypeptides capable of forming heterodimer proteins, protein scaffolds including such polypeptides, and methods for using the heterodimer proteins and subunit polypeptides for designing logic gates.
    Type: Grant
    Filed: November 4, 2019
    Date of Patent: November 21, 2023
    Assignee: UNIVERSITY OF WASHINGTON
    Inventors: Zibo Chen, Scott Boyken, Sherry Bermeo, Robert A. Langan, David Baker
  • Patent number: 11820970
    Abstract: The present invention relates to methods and compositions for the high throughput screening of protein-protein interactions in yeast liquid culture. Protein fusions non-native to yeast may be expressed to replace endogenous sexual agglutination proteins and mediate library-by-library interrogation of protein interactions. The methods and compositions of the invention can be utilized for the characterization of protein interaction networks in high throughput for both binding affinity and specificity, which is crucial for understanding cellular functions, screening therapeutic candidates, and evaluating engineered protein networks.
    Type: Grant
    Filed: September 20, 2021
    Date of Patent: November 21, 2023
    Assignee: UNIVERSITY OF WASHINGTON
    Inventors: David Baker, David Younger, Eric Klavins
  • Publication number: 20230357323
    Abstract: The present disclosure provides human 1L-23R (WL-23R) binding polypeptides, conditionally maximally active SilL˜23R binding proteins, multimers thereof, and methods for using the polypeptides and binding proteins for therapeutic use.
    Type: Application
    Filed: June 25, 2021
    Publication date: November 9, 2023
    Inventors: Stephanie Berger, Franziska Seeger, David Baker, Ta-Yi Yu
  • Patent number: 11802141
    Abstract: Beta-sheet forming polypeptides at least 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99%, or 100% identical to the amino acid sequence selected from the group consisting of SEQ ID NOS:1-24 are disclosed, together with their use and methods for designing beta-sheet forming polypeptides.
    Type: Grant
    Filed: October 23, 2020
    Date of Patent: October 31, 2023
    Assignee: UNIVERSITY OF WASHINGTON
    Inventors: Tamuka Chidyausiku, Enrique Marcos, Lucas Nivon, Gustav Oberdorfer, David Baker, Lauren Carter
  • Patent number: 11794757
    Abstract: Embodiments described herein improve fuel economy by controlling a vehicle powertrain based on a predicted vehicle velocity. The vehicle velocity is predicted based on vehicle-to-vehicle data when a prediction horizon is a longer prediction horizon and the vehicle velocity is predicted based on historical drive cycle data when the prediction horizon is a shorter prediction horizon. A time duration of the shorter prediction horizon is shorter than the time duration of the longer prediction horizon. A plurality of drive cycles are established for both the longer and the shorter prediction horizons using a neural network. A shorter prediction horizon drive cycle uses nonlinear autoregressive exogenous model neural networks and the longer prediction horizon drive cycle uses two layer feedforward neural networks. The predicted vehicle velocity is determined from a similar drive cycle of the plurality of drive cycles of either the shorter and/or the longer prediction horizon drive cycles.
    Type: Grant
    Filed: January 14, 2019
    Date of Patent: October 24, 2023
    Assignee: Colorado State University Research Foundation
    Inventors: Zachary Asher, David Baker, Thomas H. Bradley
  • Publication number: 20230330033
    Abstract: Polypeptides are disclosed comprising an (Fc) binding domain, a helical polypeptide monomer, and an oligomer domain, polymers thereof, and uses thereof.
    Type: Application
    Filed: June 7, 2021
    Publication date: October 19, 2023
    Inventors: Robert Divine, Ivan Vulovic, David Baker, William H. Sheffler, Franziska Seeger
  • Publication number: 20230313167
    Abstract: The application discloses multimeric assemblies including multiple oligomeric substructures, where each oligomeric substructure includes multiple proteins that self-interact around at least one axis of rotational symmetry, where each protein includes one or more polypeptide-polypeptide interface (“O interface”); and one or more polypeptide domain that is capable of effecting membrane scission and release of an enveloped multimeric assembly from a cell by recruiting the ESCRT machinery to the site of budding by binding to one or more proteins in the eukaryotic ESCRT complex (“L domain”); and where the multimeric assembly includes one or more subunits comprising one or more polypeptide domain that is capable of interacting with a lipid bilayer (“M domain”), as well as membrane-enveloped versions of the multimeric assemblies.
    Type: Application
    Filed: February 24, 2023
    Publication date: October 5, 2023
    Inventors: Neil King, Wesley Sundquist, Joerg Votteler, Yang Hsia, David Baker, Jacob Bale, Marc Lajoie, Gabriel Butterfield, Elizabeth Gray, Daniel Stetson
  • Patent number: 11771755
    Abstract: Nanostructures and nanostructure-based vaccines that display antigens capable of eliciting immune responses to infectious agents such as bacteria, viruses, and pathogens are provided. Some vaccines are useful for preventing or decreasing the severity of infection with an infectious agent, including, for example and without limitation, lyme disease, pertussis, herpes virus, orthomyxovirus, paramyxovirus, pneumovirus, filovirus, flavivirus, reovirus, retrovirus, meningococcus, or malaria. The antigens may be attached to the core of the nanostructure either non-covalently or covalently, including as a fusion protein or by other means. Multimeric antigens may optionally be displayed along a symmetry axis of the nanostructure. Also provided are proteins and nucleic acid molecules encoding such proteins, vaccine compositions, and methods of administration.
    Type: Grant
    Filed: February 28, 2019
    Date of Patent: October 3, 2023
    Assignee: University of Washington
    Inventors: Neil King, David Baker, Lance Stewart, Brooke Fiala, Daniel Ellis, Lauren Carter, Rashmi Ravichandran, George Ueda, Jorge Fallas, Una Nattermann
  • Publication number: 20230303626
    Abstract: Disclosed herein are macrocyclic polypeptides having no more than 3 amino acid substitutions compared to the amino acid sequence of any one of SEQ ID NO: 1-2.37 or a mirror image thereof, wherein the polypeptide includes both L and D amino acids, libraries of such polypeptides, and uses thereof.
    Type: Application
    Filed: November 10, 2022
    Publication date: September 28, 2023
    Inventors: Parisa HOSSEINZADEH, David BAKER, Gaurav BHARDWAJ, Vikram K. MULLIGAN
  • Publication number: 20230295639
    Abstract: Polypeptide are disclosed that comprise an amino acid sequence at least 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99%, or 100% identical to the amino acid sequence selected from the group consisting of SEQ ID NO:1-1615, not including any functional domains added fused to the protein (whether N-terminal, C-terminal, or internal), and wherein the 1, 2, 3, 4, or 5 N-terminal and/or C-terminal amino acid residues may be present or absent when considering the percent identity.
    Type: Application
    Filed: January 17, 2023
    Publication date: September 21, 2023
    Inventors: Christoffer NORN, Ivan ANISHCHANKA, David BAKER, Sam PELLOCK, Douglas TISCHER, Hsien-Wei YEH