Patents by Inventor David H. Sherman

David H. Sherman has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20150050704
    Abstract: The present invention is directed to the biosynthetic pathway for a nonribosomal peptide synthetase (NRPS) derived drug and analogs thereof. The invention also discloses polynucleotide sequences useful for heterologous expression in a convenient microbial host for the synthesis of the NRPS derived drug.
    Type: Application
    Filed: August 25, 2014
    Publication date: February 19, 2015
    Inventors: David H. Sherman, Garth D. Ehrlich, Benjamin Janto, Robert M. Williams, Christopher M. Rath
  • Publication number: 20150044735
    Abstract: The biosynthesis of fungal bicyclo[2.2.2]diazaoctane indole alkaloids with a wide spectrum of biological activities have attracted increasing interest. Their intriguing mode of assembly has long been proposed to feature a non-ribosomal peptide synthetase, a presumed intramolecular Diels-Alderase, a variant number of prenyltransferases, and a series of oxidases responsible for the diverse tailoring modifications of their cyclodipeptide-based structural core. Until recently, the details of these biosynthetic pathways have remained largely unknown due to lack of information on the fungal derived biosynthetic gene clusters. Herein, we report a comparative analysis of four natural product metabolic systems of a select group of bicyclo[2.2.2]diazaoctane indole alkaloids including (+)/(?)-notoamide, paraherquamide and malbrancheamide, in which we propose an enzyme for each step in the biosynthetic pathway based on deep annotation and on-going biochemical studies.
    Type: Application
    Filed: April 3, 2013
    Publication date: February 12, 2015
    Inventors: Shengying Li, Krithika Anand Srinivasan, Robert M. Williams, David H. Sherman
  • Publication number: 20140371436
    Abstract: The present invention relates to a novel polyene compound similar to nystatin, a method for preparing the same, and an antifungal drug comprising the novel polyene compound as an active ingredient. Compared to nystatin comprising one sugar, NNP, which is the polyene compound similar to nystatin, displays 300 times higher solubility and ten times lower cytotoxicity while maintaining antifungal activity, and thus can be useful in developing a novel polyene antifungal agent having improved solubility and less toxicity in terms of pharmacokinetics.
    Type: Application
    Filed: August 31, 2012
    Publication date: December 18, 2014
    Applicant: INHA-INDUSTRY PARTNERSHIP INSTITUTE
    Inventors: Eung-Soo Kim, Kyu Boem Han, Shuangjun Lin, Dekun Kong, Linquan Bai, Zixin Deng, David H. Sherman, Mi-Jin Lee
  • Patent number: 8815562
    Abstract: The present invention is directed to the biosynthetic pathway for a nonribosomal peptide synthetase (NRPS) derived drug and analogs thereof. The invention also discloses polynucleotide sequences useful for heterologous expression in a convenient microbial host for the synthesis of the NRPS derived drug.
    Type: Grant
    Filed: April 15, 2011
    Date of Patent: August 26, 2014
    Assignees: The Regenys of the University of Michigan, Allegheny-Singer Research Institute, Colorado State University Research Foundation
    Inventors: David H. Sherman, Garth D. Ehrlich, Benjamin Janto, Robert M. Williams, Christopher M. Rath
  • Patent number: 8765431
    Abstract: Disclosed herein are methods of preparing alkenes from beta-hydroxy or beta-sulfate carboxylic acid or carboxylic acid derivatives using thioesterase and optionally a sulfotransferase.
    Type: Grant
    Filed: July 23, 2010
    Date of Patent: July 1, 2014
    Assignee: The Regents of the University of Michigan
    Inventors: David H. Sherman, Janet L. Smith, Liangcai Gu, Jennifer Gehret
  • Publication number: 20130095533
    Abstract: The present invention is directed to the biosynthetic pathway for a nonribosomal peptide synthetase (NRPS) derived drug and analogs thereof. The invention also discloses polynucleotide sequences useful for heterologous expression in a convenient microbial host for the synthesis of the NRPS derived drug.
    Type: Application
    Filed: April 15, 2011
    Publication date: April 18, 2013
    Applicants: THE REGENTS OF THE UNIVERSITY OF MICHIGAN, CLORADO STATE UNIVERSITY RESEARCH FOUNDATION, ALLEGHENY-SINGER RESEARCH INSTITUTE
    Inventors: David H. Sherman, Garth D. Ehrlich, Benjamin Janto, Robert M. Williams, Christopher M. Rath
  • Patent number: 8313936
    Abstract: The present invention provides polypeptides involved in cryptophycin biosynthesis and the nucleic acid molecules that encode such polypeptides. The nucleic acid molecules and polypeptides of the invention or variants thereof can be used in the methods of the invention to produce cryptophycins.
    Type: Grant
    Filed: July 22, 2009
    Date of Patent: November 20, 2012
    Assignee: Regents of the University of Michigan
    Inventors: David H Sherman, Zachary Q Beck, Yousong Ding
  • Publication number: 20120220008
    Abstract: The present invention provides polypeptides involved in cryptophycin biosynthesis and the nucleic acid molecules that encode such polypeptides. The nucleic acid molecules and polypeptides of the invention or variants thereof can be used in the methods of the invention to produce cryptophycins.
    Type: Application
    Filed: July 22, 2009
    Publication date: August 30, 2012
    Inventors: David H Sherman, Zachary Q. Beck, Yousong Ding
  • Publication number: 20120190635
    Abstract: The present invention provides regio- and stereoselective oxidation of unactivated C—H bonds using an engineered mutant cytochrome P450 monooxygenase and an engineered substrate.
    Type: Application
    Filed: September 27, 2010
    Publication date: July 26, 2012
    Applicant: THE REGENTS OF THE UNIVERSITY OF MICHIGAN
    Inventors: Shengying Li, David H. Sherman, John Montgomery, Mani R. Chaulagain, Allison R. Knauff
  • Patent number: 8114640
    Abstract: A method of preparing macrocycles using solid support chemistry and thioesterases is disclosed. Also disclosed are novel macrocycles.
    Type: Grant
    Filed: October 30, 2008
    Date of Patent: February 14, 2012
    Assignee: The Regents of the University of Michigan
    Inventors: David H. Sherman, Wolfgang Seufert, Zachary Q. Beck
  • Publication number: 20110091952
    Abstract: Disclosed herein are methods of preparing alkenes from beta-hydroxy or beta-sulfate carboxylic acid or carboxylic acid derivatives using thioesterase and optionally a sulfotransferase.
    Type: Application
    Filed: July 23, 2010
    Publication date: April 21, 2011
    Applicant: THE REGENTS OF THE UNIVERSITY OF MICHIGAN
    Inventors: David H. Sherman, Janet L. Smith, Liangcai Gu, Jennifer Gehret
  • Patent number: 7662599
    Abstract: The present invention provides polypeptides involved in cryptophycin biosynthesis and the nucleic acid molecules that encode such polypeptides. The nucleic acid molecules and polypeptides of the invention or variants thereof can be used in the methods of the invention to produce cryptophycins.
    Type: Grant
    Filed: March 27, 2007
    Date of Patent: February 16, 2010
    Assignees: Regents of the University of Minnesota, Regents of the University of Michigan
    Inventors: David H. Sherman, Nathan Magarvey, Zachary Q. Beck
  • Patent number: 7566558
    Abstract: The present invention provides polypeptides involved in cryptophycin biosynthesis and the nucleic acid molecules that encode such polypeptides. The nucleic acid molecules and polypeptides of the invention or variants thereof can be used in the methods of the invention to produce cryptophycins.
    Type: Grant
    Filed: July 30, 2007
    Date of Patent: July 28, 2009
    Assignee: Regents of the University of Michigan
    Inventors: David H. Sherman, Zachary Q. Beck, Yousong Ding
  • Publication number: 20090111152
    Abstract: A method of preparing macrocycles using solid support chemistry and thioesterases is disclosed. Also disclosed are novel macrocycles.
    Type: Application
    Filed: October 30, 2008
    Publication date: April 30, 2009
    Applicant: THE REGENTS OF THE UNIVERSITY OF MICHIGAN
    Inventors: David H. Sherman, Wolfgang Seufert, Zachary Q. Beck
  • Publication number: 20090081758
    Abstract: The present invention provides chimeric cytochrome P450 enzymes fused to heterologous reductase domains to generate single-component, self-sufficient, more cost-effective and catalytically more active biosynthetic P450 monooxygenases.
    Type: Application
    Filed: September 22, 2008
    Publication date: March 26, 2009
    Applicant: THE REGENTS OF THE UNIVERSITY OF MICHIGAN
    Inventors: Shengying Li, David H. Sherman
  • Patent number: 7427497
    Abstract: Disclosed herein is a microfluidics device that can be used to prepare natural products and their analogs. The device comprises the enzymes of a biosynthetic pathway immobilized thereon and a means for sequentially directing a starting material and each ensuing reaction product to the enzymes of the biosynthetic pathway in the order corresponding to the steps of the biosynthetic pathway. The device can thus be used to prepare the natural product using the natural starting material of the biosynthetic pathway or analogs of the natural product using an unnatural starting material. Alternatively, artificial pathways can be created by immobilizing an appropriate selection of enzymes on the device in an order whereby each subsequent enzyme can catalyze a reaction with the product of the prior enzyme. Novel chemical entities can be prepared from these artificial pathways.
    Type: Grant
    Filed: November 1, 2002
    Date of Patent: September 23, 2008
    Assignees: Rensselaer Polytechnic Institute, Darpa, The Regents of the University of California
    Inventors: Jonathan S. Dordick, Aravind Srinivasan, Jungbae Kim, David H. Sherman, Douglas S. Clark
  • Patent number: 7229814
    Abstract: The present invention provides polypeptides involved in cryptophycin biosynthesis and the nucleic acid molecules that encode such polypeptides. The nucleic acid molecules and polypeptides of the invention or variants thereof can be used in the methods of the invention to produce cryptophycins.
    Type: Grant
    Filed: May 5, 2005
    Date of Patent: June 12, 2007
    Assignees: Regents of the University of Minnesota, Regents of the University of Michigan
    Inventors: David H. Sherman, Nathan Magarvey, Zachary Q. Beck
  • Publication number: 20040161839
    Abstract: A method to modify the structure of sugars is provided.
    Type: Application
    Filed: November 3, 2003
    Publication date: August 19, 2004
    Inventors: Hung-Wen Liu, David H. Sherman, Lishan Zhao
  • Publication number: 20040062687
    Abstract: Disclosed herein is a microfluidics device that can be used to prepare natural products and their analogs. The device comprises the enzymes of a biosynthetic pathway immobilized thereon and a means for sequentially directing a starting material and each ensuing reaction product to the enzymes of the biosynthetic pathway in the order corresponding to the steps of the biosynthetic pathway. The device can thus be used to prepare the natural product using the natural starting material of the biosynthetic pathway or analogs of the natural product using an unnatural starting material. Alternatively, artificial pathways can be created by immobilizing an appropriate selection of enzymes on the device in an order whereby each subsequent enzyme can catalyze a reaction with the product of the prior enzyme. Novel chemical entities can be prepared from these artificial pathways.
    Type: Application
    Filed: November 1, 2002
    Publication date: April 1, 2004
    Applicant: Rensselaer Polytechnic Institute
    Inventors: Jonathan S. Dordick, Aravind Srinivasan, Jungbae Kim, David H. Sherman, Douglas S. Clark
  • Publication number: 20030194784
    Abstract: A novel pathway for the synthesis of polyhydroxyalkanoates is provided. A method of synthesizing a recombinant polyhydroxyalkanoate monomer synthase is also provided. These recombinant polyhydroxyalkanoate synthases are derived from multifunctional fatty acid synthases or polyketide synthases and generate hydroxyacyl acids capable of polymerization by a polyhydroxyalkanoate synthase. Also provided is a biosynthetic gene cluster for methymycin and pikomycin as well as a biosynthetic gene cluster for desosamine.
    Type: Application
    Filed: October 15, 2002
    Publication date: October 16, 2003
    Inventors: David H. Sherman, Hung-Wen Liu, Yongquan Xue, Lishan Zhao