Patents by Inventor John B. Hogenesch

John B. Hogenesch has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20210137911
    Abstract: The invention includes a formulation of a therapeutic compound, wherein release of the therapeutic compound from the formulation coincides with peak or trough expression of at least one target gene of the therapeutic compound. The invention also includes a method of developing such formulations and a method of treating a disorder in a subject using such formulations.
    Type: Application
    Filed: January 20, 2021
    Publication date: May 13, 2021
    Inventors: John B. Hogenesch, Garret A. Fitzgerald
  • Publication number: 20210098121
    Abstract: The present disclosure relates to analyzing operational rhythms in hospital treatment and providing recommendations for hospital treatment based on the same. In an exemplary embodiment, a server comprises one or more processors; and memory comprising instructions that, when executed, cause the one or more processors to receive, from a database, treatment data corresponding to a treatment provided to a plurality of patients. The memory further comprises instructions that, when executed, cause the one or more processor to determine a preferred treatment regimen based upon the treatment data, wherein the preferred treatment regimen comprises a time of day the treatment is more effective than other times of the day based upon responses to the treatment. The memory also comprises instructions that, when executed, cause the one or more processor to provide a notification to a user interface to provide the treatment at the time of the day the treatment is more effective.
    Type: Application
    Filed: September 30, 2020
    Publication date: April 1, 2021
    Inventors: Marc D. Ruben, John B. Hogenesch, David F. Smith
  • Publication number: 20180071272
    Abstract: The invention includes a formulation of a therapeutic compound, wherein release of the therapeutic compound from the formulation coincides with peak or trough expression of at least one target gene of the therapeutic compound. The invention also includes a method of developing such formulations and a method of treating a disorder in a subject using such formulations.
    Type: Application
    Filed: October 19, 2015
    Publication date: March 15, 2018
    Inventors: JOHN B. HOGENESCH, GARRET A. FITZGERALD
  • Publication number: 20160186209
    Abstract: The invention provides recombinant cells comprising detectable reporters useful in identifying agents, genes, and other modulators of circadian period length and amplitude. Such modulators are useful for resetting the circadian clock in a variety of contexts (e.g., jet lag, shift work). Such cells are also useful in selecting an administration regimen for a therapeutic agent, where the agent's efficacy and/or adverse side effects show circadian effects.
    Type: Application
    Filed: April 25, 2013
    Publication date: June 30, 2016
    Inventors: Andrew C. Liu, Chidambaram Ramanathan, John B. Hogenesch
  • Patent number: 8044025
    Abstract: A human urocortin-related peptide with significant sequence homology to the CRF neuropeptide family was identified. A mouse cDNA was isolated from whole brain poly (A+) RNA that encodes a predicted 38 amino acid peptide protein designated herein as urocortin II. Both human URP and mouse Ucn II are structurally related to the other known mammalian family members, CRF and urocortin (Ucn). These peptides are involved in the regulation of the hypothalamic-pituitary-adrenal axis under basal and stress conditions, suggesting a similar role for URP and Ucn IL Synthesized Ucn-II and URP peptide binds with higher affinity to CRF-R2 than to CRF-R1 Ucn II and human URP appear to be involved in the regulation of body temperature and appetite and may play a role in other stress related phenomenon. These findings identify Ucn II and human URP as a new members of the CRF family of neuropeptides, which are expressed centrally and bind to CRF-R2.
    Type: Grant
    Filed: December 7, 2009
    Date of Patent: October 25, 2011
    Assignee: Research Development Foundation
    Inventors: Wylie W. Vale, Jr., Teresa M. Reyes, Paul E. Sawchenko, Jean E. Rivier, Kathy A. Lewis, John B. Hogenesch, Joan M. Vaughan, Marilyn H. Perrin
  • Publication number: 20100168021
    Abstract: A human urocortin-related peptide with significant sequence homology to the CRF neuropeptide family was identified. A mouse cDNA was isolated from whole brain poly (A+) RNA that encodes a predicted 38 amino acid peptide protein designated herein as urocortin II. Both human URP and mouse Ucn II are structurally related to the other known mammalian family members, CRF and urocortin (Ucn). These peptides are involved in the regulation of the hypothalamic-pituitary-adrenal axis under basal and stress conditions, suggesting a similar role for URP and Ucn IL Synthesized Ucn-II and URP peptide binds with higher affinity to CRF-R2 than to CRF-R1 Ucn II and human URP appear to be involved in the regulation of body temperature and appetite and may play a role in other stress related phenomenon. These findings identify Ucn II and human URP as a new members of the CRF family of neuropeptides, which are expressed centrally and bind to CRF-R2.
    Type: Application
    Filed: December 7, 2009
    Publication date: July 1, 2010
    Applicant: RESEARCH DEVELOPMENT FOUNDATION
    Inventors: Wylie Walker Vale, JR., Teresa M. Reyes, Paul E. Sawchenko, Jean E. Rivier, Kathy A. Lewis, John B. Hogenesch, Joan M. Vaughan, Marilyn H. Perrin
  • Patent number: 7638607
    Abstract: A human urocortin-related peptide with significant sequence homology to the CRF neuropeptide family was identified. A mouse CDNA was isolated from whole brain poly (A+) RNA that encodes a predicted 38 amino acid peptide protein designated herein as urocortin II. Both human URP and mouse Ucn II are structurally related to the other known mammalian family members, CRF and urocortin (Ucn). These peptides are involved in the regulation of the hypothalamic-pituitary-adrenal axis under basal and stress conditions, suggesting a similar role for URP and Ucn IL Synthesized Ucn-II and URP peptide binds with higher affinity to CRF-R2 than to CRF-R1 Ucn II and human URP appear to be involved in the regulation of body temperature and appetite and may play a role in other stress related phenomenon. These findings identify Ucn II and human URP as a new members of the CRF family of neuropeptides, which are expressed centrally and bind to CRF-R2.
    Type: Grant
    Filed: April 5, 2007
    Date of Patent: December 29, 2009
    Assignee: Research Development Foundation
    Inventors: Wylie Walker Vale, Jr., Teresa M Reyes, Paul E Sawchenko, Jean E F Rivier, Kathy A Lewis, John B Hogenesch, Joan M Vaughan, Marilyn H Perrin
  • Publication number: 20090142793
    Abstract: Screening assays for identifying agents that modulate BK channel activity and further modulate the sleep/wake cycle in a subject, circadian regulated locomotor activity in a subject, or both are provided, as are agents identified using such screening assays. Also provided are methods of modulating the sleep/wake cycle in a subject and methods of modulating circadian regulated locomotor activity in a subject by administering an agent that modulates BK channel activity to the subject, for example, an agent identified by a screening assay as disclosed.
    Type: Application
    Filed: September 23, 2008
    Publication date: June 4, 2009
    Inventors: Steve A. Kay, John B. Hogenesch, M. Fernanda Ceriani, Satchidananda Panda
  • Patent number: 7501489
    Abstract: The present invention provides isolated nucleic acids and proteins that are new and distinct members of the bHLH-PAS superfamily of transcription regulators. These “MOPs” (members of PAS) are useful in a variety of research, diagnostic and therapeutic applications. Several of the MOPs of the present invention are ?-class hypoxia-inducible factors. Several other of the MOPs of the invention are involved in circadian signal transduction.
    Type: Grant
    Filed: November 29, 2005
    Date of Patent: March 10, 2009
    Assignee: Wisconsin Alumni Research Foundation
    Inventors: Christopher A. Bradfield, Yi Zhong Gu, John B. Hogenesch
  • Patent number: 7427489
    Abstract: Screening assays for identifying agents that modulate BK channel activity and further modulate the sleep/wake cycle in a subject, circadian regulated locomotor activity in a subject, or both are provided, as are agents identified using such screening assays. Also provided are methods of modulating the sleep/wake cycle in a subject and methods of modulating circadian regulated locomotor activity in a subject by administering an agent that modulates BK channel activity to the subject, for example, an agent identified by a screening assay as disclosed.
    Type: Grant
    Filed: June 17, 2003
    Date of Patent: September 23, 2008
    Assignees: The Scripps Research Institute, IRM LLC
    Inventors: Steve A. Kay, John B. Hogenesch, M. Fernanda Ceriani, Satchidananda Panda
  • Patent number: 7344833
    Abstract: This invention provides novel AP-1 modulatory polypeptides. The invention also provides methods for screening modulators of AP-1 transcription factor activities. The methods comprise first screening test agents for modulators of an AP-1-modulatory polypeptide and then further screening the identified modulating agents for modulators of AP-1 transcription factor activities. The invention further provides methods and pharmaceutical compositions for modulating AP-1 transcription factor activities in a cell and for treating diseases and conditions mediated by abnormal cellular proliferation.
    Type: Grant
    Filed: November 5, 2003
    Date of Patent: March 18, 2008
    Assignee: IRM LLC
    Inventors: Sumit Chanda, Suhaila White, John B. Hogenesch, Jeremy S. Caldwell
  • Patent number: 7223846
    Abstract: A human urocortin-related peptide with significant sequence homology to the CRF neuropeptide family was identified. A mouse cDNA was isolated from whole brain poly (A+) RNA that encodes a predicted 38 amino acid peptide protein designated herein as urocortin II. Both human URP and mouse Ucn II are structurally related to the other known mammalian family members, CRF and urocortin (Ucn). These peptides are involved in the regulation of the hypothalamic-pituitary-adrenal axis under basal and stress conditions, suggesting a similar role for URP and Ucn II. Synthesized Ucn-II and URP peptide binds with higher affinity to CRF-R2 than to CRF-R1 Ucn II and human URP appear to be involved in the regulation of body temperature and appetite and may play a role in other stress related phenomenon. These findings identify Ucn II and human URP as a new members of the CRF family of neuropeptides, which are expressed centrally and bind to CRF-R2.
    Type: Grant
    Filed: October 25, 2004
    Date of Patent: May 29, 2007
    Assignee: Research Development Foundation
    Inventors: Wylie Walker Vale, Jr., Teresa M Reyes, Paul E Sawchenko, Jean E F Rivier, Kathy A Lewis, John B Hogenesch, Joan M Vaughan, Marilyn H Perrin
  • Patent number: 7105647
    Abstract: The present invention provides isolated nucleic acids and proteins that are new and distinct members of the bHLH-PAS superfamily of transcription regulators. These “MOPs” (members of PAS) are useful in a variety of research, diagnostic and therapeutic applications. Several of the MOPs of the present invention are ?-class hypoxia-inducible factors. Several other of the MOPs of the invention are involved in circadian signal transduction.
    Type: Grant
    Filed: November 27, 1998
    Date of Patent: September 12, 2006
    Assignee: Wisconsin Alumni Research Foundation
    Inventors: Christopher A. Bradfield, Yi Zhong Gu, John B. Hogenesch
  • Patent number: 6838274
    Abstract: A human urocortin-related peptide with significant sequence homology to the CRF neuropeptide family was identified. A mouse cDNA was isolated from whole brain poly (A+) RNA that encodes a predicted 38 amino acid peptide protein designated herein as urocortin II. Both human URP and mouse Ucn II are structurally related to the other known mammalian family members, CRF and urocortin (Ucn). These peptides are involved in the regulation of the hypothalamic-pituituary-adrenal axis under basal and stress conditions, suggesting a similar role for URP and Ucn II. Synthesized Ucn-II and URP peptide binds with higher affinity to CRF-R2 than to CRF-R1 Ucn II and human URP appear to be involved in the regulation of body temperature and appetite and may play a role in other stress related phenomenon. These findings identify Ucn II and human URP as a new members of the CRF family of neuropeptides, which are expressed centrally and bind to CRF-R2.
    Type: Grant
    Filed: July 31, 2001
    Date of Patent: January 4, 2005
    Assignee: Research Development Foundation
    Inventors: Wylie W. Vale, Jr., Teresa M. Reyes, Paul E. Sawchenko, Jean E. Rivier, Kathy A. Lewis, John B. Hogenesch, Joan M. Vaughan, Marilyn H. Perrin
  • Publication number: 20040171035
    Abstract: This invention provides novel p53 modulatory polypeptides. The invention also provides methods for screening modulators of p53. The methods comprise first screening test agents for modulators of a p53-modulatory polypeptide and then further screening the identified modulating agents for modulators of p53. The invention further provides methods and pharmaceutical compositions for modulating p53 bioactivities in a cell and for treating diseases and conditions mediated by abnormal cellular proliferation.
    Type: Application
    Filed: November 7, 2003
    Publication date: September 2, 2004
    Applicants: IRM LLC, The Scripps Research Institute
    Inventors: Qihong Huang, Sumit Chanda, John B. Hogenesch, Jeremy S. Caldwell
  • Publication number: 20040146903
    Abstract: This invention provides novel AP-1 modulatory polypeptides. The invention also provides methods for screening modulators of AP-1 transcription factor activities. The methods comprise first screening test agents for modulators of an AP-1-modulatory polypeptide and then further screening the identified modulating agents for modulators of AP-1 transcription factor activities. The invention further provides methods and pharmaceutical compositions for modulating AP-1 transcription factor activities in a cell and for treating diseases and conditions mediated by abnormal cellular proliferation.
    Type: Application
    Filed: November 5, 2003
    Publication date: July 29, 2004
    Applicant: IRM LLC, a Delaware Limited Liability Company
    Inventors: Sumit Chanda, Suhaila White, John B. Hogenesch, Jeremy S. Caldwell
  • Publication number: 20040076954
    Abstract: Methods for identifying responder genes and regulatory regions that confer responsiveness to a test substance or other perturbation are provided. Regulatory regions identified by such methods or other methods are cloned into expression constructs to control expression of a nucleic acid molecule that encodes, for example, a selectable marker or reporter, and introduced into cells. The resulting cells are used, for example, in high throughput screening assays for profiling substances and conditions and for studying the function of the regulatory region mediating the response. Addressable collections of the cells are also provided.
    Type: Application
    Filed: March 12, 2002
    Publication date: April 22, 2004
    Applicant: IRM, LLC
    Inventors: Jeremy S. Caldwell, John B. Hogenesch, Andrew I. Su
  • Publication number: 20030170642
    Abstract: A genetic screening methodology for rapid identification of candidate targets of any small molecule cellular effectors and other signals and modulators of cellular functions and pathways is provided. The effect of a small molecule or other signal on a cell is titrated by expressing within the cell cDNA that encodes a polypeptide that is the molecular target or that is responsible for directly or indirectly producing the molecular target.
    Type: Application
    Filed: March 12, 2002
    Publication date: September 11, 2003
    Applicant: IRM, LLC
    Inventors: Jeremy S. Caldwell, Sumit K. Chanda, Nikunj V. Somia, John B. Hogenesch, Michael P. Cooke, Pedro Aza-Blanc
  • Publication number: 20020127221
    Abstract: A human urocortin-related peptide with significant sequence homology to the CRF neuropeptide family was identified. A mouse cDNA was isolated from whole brain poly (A+) RNA that encodes a predicted 38 amino acid peptide protein designated herein as urocortin II. Both human URP and mouse Ucn II are structurally related to the other known mammalian family members, CRF and urocortin (Ucn). These peptides are involved in the regulation of the hypothalamic-pituitary-adrenal axis under basal and stress conditions, suggesting a similar role for URP and Ucn II. Synthesized Ucn-II and URP peptide binds with higher affinity to CRF-R2 than to CRF-R1 Ucn II and human URP appear to be involved in the regulation of body temperature and appetite and may play a role in other stress related phenomenon. These findings identify Ucn II and human URP as a new members of the CRF family of neuropeptides, which are expressed centrally and bind to CRF-R2.
    Type: Application
    Filed: July 31, 2001
    Publication date: September 12, 2002
    Inventors: Wylie W. Vale, Teresa M. Reyes, Paul E. Sawchenko, Jean E. Rivier, Kathy A. Lewis, John B. Hogenesch, Joan M. Vaughan, Marilyn H. Perrin