Patents by Inventor John M. GEREMIA

John M. GEREMIA has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11883422
    Abstract: Preparations of glycan therapeutics, pharmaceutical compositions, dietary supplements and medical foods thereof are provided, and methods of using said glycan therapeutics, e.g. in cancer therapy.
    Type: Grant
    Filed: June 30, 2021
    Date of Patent: January 30, 2024
    Assignee: DSM Nutritional Products, LLC
    Inventors: Geoffrey A. von Maltzahn, Yvonne J. Yamanaka, Jared Silverman, John Miles Milwid, Jacob Rosenblum Rubens, John M. Geremia
  • Patent number: 11754536
    Abstract: Disclosed are methods, libraries, and samples for quantifying a target analyte in a laboratory sample including the target analyte. The methods typically include the step of estimating the amount of the target analyte in the laboratory sample from mass spectrometric data including signal intensities for the target analyte and one or more internal standards, where the mass spectrometric data are an output of a mass spectrometric analysis of a target sample produced from the laboratory sample and a predetermined amount of the one or more internal standards. The present disclosure also provides a method for analyte quantification. The method comprises adding one or more calibrators to a sample comprising one or more analytes; applying mass spectrometry (MS) to the sample; and using a trained machine learning model to determine an absolute concentration of the one or more analytes.
    Type: Grant
    Filed: September 7, 2022
    Date of Patent: September 12, 2023
    Assignee: MATTERWORKS INC
    Inventors: Timothy Kassis, Jefferson Pruyne, Mark D. Simon, Mimoun Cadosch Delmar Akerman, Jennifer Campbell, Ana Henriques Da Costa, Laura Kolinsky, John M. Geremia
  • Publication number: 20230255240
    Abstract: Described herein are methods of producing animal feed made up of oligosaccharide compositions, as well as methods of producing such oligosaccharide compositions and animal feed compositions, and methods of using such animal feed compositions to enhance animal growth.
    Type: Application
    Filed: April 21, 2023
    Publication date: August 17, 2023
    Inventors: John M. GEREMIA, Raffi MARDIROSIAN, Michael J. GIDDING, Anastasia V. MURPHY
  • Patent number: 11697692
    Abstract: Preparations of glycan polymers and variations thereof, pharmaceutical compositions, medical foods, supplements, foods, food ingredients, feed ingredients, and feed additives thereof, optionally comprising micronutrients, polyphenols, prebiotics, probiotics, or other agents are provided and methods of making same.
    Type: Grant
    Filed: November 3, 2018
    Date of Patent: July 11, 2023
    Assignee: DSM Nutritional Products, LLC
    Inventors: John M. Geremia, Christopher Matthew Liu, Anastasia V. Lioubomirov
  • Publication number: 20230170049
    Abstract: Disclosed are methods, libraries, and samples for quantifying a target analyte in a laboratory sample including the target analyte. The methods typically include the step of estimating the amount of the target analyte in the laboratory sample from mass spectrometric data including signal intensities for the target analyte and one or more internal standards, where the mass spectrometric data are an output of a mass spectrometric analysis of a target sample produced from the laboratory sample and a predetermined amount of the one or more internal standards. The present disclosure also provides a method for analyte quantification. The method comprises adding one or more calibrators to a sample comprising one or more analytes; applying mass spectrometry (MS) to the sample; and using a trained machine learning model to determine an absolute concentration of the one or more analytes.
    Type: Application
    Filed: September 7, 2022
    Publication date: June 1, 2023
    Inventors: Timothy KASSIS, Jefferson PRUYNE, Mark D. SIMON, Mimoun CADOSCH DELMAR AKERMAN, Jennifer CAMPBELL, Ana HENRIQUES DA COSTA, Laura KOLINSKY, John M. GEREMIA
  • Patent number: 11653676
    Abstract: Described herein are methods of producing animal feed made up of oligosaccharide compositions, as well as methods of producing such oligosaccharide compositions and animal feed compositions, and methods of using such animal feed compositions to enhance animal growth.
    Type: Grant
    Filed: November 30, 2020
    Date of Patent: May 23, 2023
    Assignee: DSM Nutritional Products, LLC
    Inventors: John M. Geremia, Raffi Mardirosian, Michael J. Gidding, Anastasia V. Murphy
  • Publication number: 20230133615
    Abstract: Disclosed are methods, libraries, and samples for quantifying a target analyte in a laboratory sample including the target analyte. The methods typically include the step of estimating the amount of the target analyte in the laboratory sample from mass spectrometric data including signal intensities for the target analyte and one or more internal standards, where the mass spectrometric data are an output of a mass spectrometric analysis of a target sample produced from the laboratory sample and a predetermined amount of the one or more internal standards. The present disclosure also provides a method for analyte quantification. The method comprises adding one or more calibrators to a sample comprising one or more analytes; applying mass spectrometry (MS) to the sample; and using a trained machine learning model to determine an absolute concentration of the one or more analytes.
    Type: Application
    Filed: September 7, 2022
    Publication date: May 4, 2023
    Inventors: Timothy KASSIS, Jefferson PRUYNE, Mark D. SIMON, Mimoun CADOSCH DELMAR AKERMAN, Jennifer CAMPBELL, Ana HENRIQUES DA COSTA, Laura KOLINSKY, John M. GEREMIA
  • Publication number: 20230137741
    Abstract: Disclosed are methods, libraries, and samples for quantifying a target analyte in a laboratory sample including the target analyte. The methods typically include the step of estimating the amount of the target analyte in the laboratory sample from mass spectrometric data including signal intensities for the target analyte and one or more internal standards, where the mass spectrometric data are an output of a mass spectrometric analysis of a target sample produced from the laboratory sample and a predetermined amount of the one or more internal standards. The present disclosure also provides a method for analyte quantification. The method comprises adding one or more calibrators to a sample comprising one or more analytes; applying mass spectrometry (MS) to the sample; and using a trained machine learning model to determine an absolute concentration of the one or more analytes.
    Type: Application
    Filed: September 7, 2022
    Publication date: May 4, 2023
    Inventors: Timothy KASSIS, Jefferson PRUYNE, Mark D. SIMON, Mimoun CADOSCH DELMAR AKERMAN, Jennifer CAMPBELL, Ana HENRIQUES DA COSTA, Laura KOLINSKY, John M. GEREMIA
  • Patent number: 11584805
    Abstract: Described herein are methods for the production of oligosaccharides, including functionalized oligosaccharides, from one or more sugars, such as one or more monosaccharides, using polymeric and solid-supported catalysts containing acidic and ionic groups. Also provided are the oligosaccharide compositions, including functionalized oligosaccharide compositions, obtained using the methods.
    Type: Grant
    Filed: June 25, 2020
    Date of Patent: February 21, 2023
    Assignee: DSM Nutritional Products, LLC
    Inventors: John M. Geremia, Anastasia V. Lioubomirov, Scott Han, Benjamin A. Seigal, Alicia Landry, Kyle Sherry, Stephen Panos, Devin Churchman, Andrew O'Connor
  • Publication number: 20220409644
    Abstract: Provided herein are oligosaccharide compositions for administration to animals suitable for improving animal health, including, for example, to treat diseases or disorders or to enhance animal growth.
    Type: Application
    Filed: February 17, 2022
    Publication date: December 29, 2022
    Inventors: John M. GEREMIA, Anastasia V. MURPHY
  • Publication number: 20220400728
    Abstract: Described herein are food ingredients made up of oligosaccharide compositions, and methods of producing such food ingredients, as well as methods of using such food ingredients in food products. The present application addresses this need in the art by providing oligosaccharide compositions that have similar physical characteristics to commercially available carbohydrate sources, such as fiber, but lower metabolic energy. Methods of producing such oligosaccharide compositions suitable for use in food products are also provided herein.
    Type: Application
    Filed: January 14, 2022
    Publication date: December 22, 2022
    Inventors: John M. GEREMIA, Raffi MARDIROSIAN, Michael J. GIDDING
  • Publication number: 20220395521
    Abstract: Compositions comprising microbiome regulators are provided, as well as methods of using the same for the modulation of the human microbiota and to treat or prevent related diseases, disorders, or conditions.
    Type: Application
    Filed: January 19, 2022
    Publication date: December 15, 2022
    Applicant: Kaleido Biosciences, Inc.
    Inventors: Geoffrey A. von Maltzahn, John M. Geremia
  • Patent number: 11229660
    Abstract: Preparations of glycan therapeutics, pharmaceutical compositions and medical foods thereof, optionally comprising micronutrients, polyphenols, prebiotics, probiotics, or other agents are provided and methods of making same. Also provided are methods of using said gycan therapeutics, e.g. for the modulation of human gastrointestinal microbiota and to treat dysbioses.
    Type: Grant
    Filed: May 26, 2020
    Date of Patent: January 25, 2022
    Assignee: Kaleido Biosciences, Inc.
    Inventors: Geoffrey A. von Maltzahn, Jared Silverman, Yvonne J. Yamanaka, John Miles Milwid, John M. Geremia
  • Publication number: 20210401861
    Abstract: Preparations of glycan therapeutics, pharmaceutical compositions, dietary supplements and medical foods thereof are provided, and methods of using said glycan therapeutics, e.g. in cancer therapy.
    Type: Application
    Filed: June 30, 2021
    Publication date: December 30, 2021
    Applicant: Kaleido Biosciences, Inc.
    Inventors: Geoffrey A. von Maltzahn, Yvonne J. Yamanaka, Jared Silverman, John Miles Milwid, Jacob Rosenblum Rubens, John M. Geremia
  • Publication number: 20210352945
    Abstract: Described herein are methods of producing prebiotic compositions that are made up of oligosaccharide compositions, as well as methods of using such prebiotic compositions in nutritional compositions and methods of producing such oligosaccharide and nutritional compositions.
    Type: Application
    Filed: July 30, 2021
    Publication date: November 18, 2021
    Inventor: John M. GEREMIA
  • Patent number: 11169101
    Abstract: Aspects of the disclosure relate to oligosaccharide compositions and methods of making the same. Also provided are methods of using oligosaccharide compositions as microbiome metabolic therapies for reducing ammonia levels and for the treatment of related diseases.
    Type: Grant
    Filed: January 25, 2021
    Date of Patent: November 9, 2021
    Assignee: Kaleido Biosciences, Inc.
    Inventors: Christopher Matthew Liu, Anastasia Lioubomirov, John M. Geremia, Mitchell Antalek, Jonathan Lawrence, Tatyana Yatsunenko, Brian Meehan
  • Publication number: 20210198302
    Abstract: Aspects of the disclosure relate to oligosaccharide compositions and methods of making the same. Also provided are methods of using oligosaccharide compositions as microbiome metabolic therapies for reducing ammonia levels and for the treatment of hyperammonemia-related diseases (e.g., urea cycle disorders and hepatic encephalopathy).
    Type: Application
    Filed: August 21, 2019
    Publication date: July 1, 2021
    Applicant: Kaleido Biosciences, Inc.
    Inventors: Christopher Matthew Liu, John M. Geremia, Anastasia Lioubomirov, Max Hecht
  • Publication number: 20210164926
    Abstract: Aspects of the disclosure relate to oligosaccharide compositions and methods of making the same. Also provided are methods of using oligosaccharide compositions as microbiome metabolic therapies for reducing ammonia levels and for the treatment of related diseases.
    Type: Application
    Filed: January 25, 2021
    Publication date: June 3, 2021
    Applicant: Kaleido Biosciences, Inc.
    Inventors: Christopher Matthew Liu, Anastasia Lioubomirov, John M. Geremia, Mitchell Antalek, Jonathan Lawrence, Tatyana Yatsunenko, Brian Meehan
  • Publication number: 20210121486
    Abstract: Provided herein are oligosaccharide compositions for administration to animals suitable for improving animal health, including, for example, to treat diseases or disorders or to enhance animal growth.
    Type: Application
    Filed: July 6, 2020
    Publication date: April 29, 2021
    Inventors: John M. GEREMIA, Anastasia V. MURPHY
  • Publication number: 20210113596
    Abstract: Preparations of glycan therapeutics, pharmaceutical compositions and medical foods thereof, optionally comprising micronutrients, polyphenols, prebiotics, probiotics, or other agents are provided and methods of making same. Also provided are methods of using said gycan therapeutics, e.g. for the modulation of human gastrointestinal microbiota and to treat dysbioses.
    Type: Application
    Filed: May 26, 2020
    Publication date: April 22, 2021
    Applicant: Kaleido Biosciences, Inc.
    Inventors: Geoffrey A. von Maltzahn, Jared Silverman, Yvonne J. Yamanaka, John Miles Milwid, John M. Geremia