Patents by Inventor Mohammad Rahimi Lenji

Mohammad Rahimi Lenji has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11919002
    Abstract: The invention provides kits, devices, methods, and systems for forming droplets or particles and methods of their use. The devices may be used to form droplets of a size suitable for utilization as microscale chemical reactors, e.g., for genetic sequencing. In general, droplets are formed in a device by flowing a first liquid through a channel and into a droplet formation region including a second liquid, i.e., the continuous phase. The invention allows for more efficient recovery of droplets or processed droplets.
    Type: Grant
    Filed: August 20, 2020
    Date of Patent: March 5, 2024
    Assignee: 10x Genomics, Inc.
    Inventors: Mohammad Rahimi Lenji, Rajiv Bharadwaj
  • Patent number: 11833515
    Abstract: Provided are microfluidics systems, devices, and networks for generating partitions. The microfluidics systems, devices, and networks may facilitate efficient merging of one or more channels in a microfluidic network and prevent blockage of a channel segment, such as by gas (e.g., air) bubbles or by one or more particles in a fluid.
    Type: Grant
    Filed: April 27, 2020
    Date of Patent: December 5, 2023
    Assignee: 10x Genomics, Inc.
    Inventors: Tobias Daniel Wheeler, Bill Kengli Lin, Mohammad Rahimi Lenji, Anthony Makarewicz, Rajiv Bharadwaj
  • Publication number: 20230278037
    Abstract: Devices, systems, and their methods of use, for generating and collecting droplets are provided. The invention provides multiplex devices that increase droplet formation in a limited area.
    Type: Application
    Filed: March 2, 2023
    Publication date: September 7, 2023
    Inventors: Rajiv Bharadwaj, Lynna Chen, Francis Cui, Daniel Freitas, Mohammad Rahimi Lenji, Martin Sauzade, Augusto Manuel Tentori, Tobias Daniel Wheeler
  • Publication number: 20230278038
    Abstract: Devices, systems, and their methods of use, for generating and collecting droplets are provided. Devices use flow focusing arrangements of channels to produce droplets. The invention further provides multiplex devices that increase droplet formation.
    Type: Application
    Filed: March 2, 2023
    Publication date: September 7, 2023
    Inventors: Mohammad RAHIMI LENJI, Yiran ZHANG, Francis MARCOGLIESE, Tobias Daniel WHEELER, Rajiv BHARADWAJ
  • Publication number: 20230203577
    Abstract: The present disclosure provides compositions, methods, systems, and devices for polynucleotide processing and analyte characterization. Such polynucleotide processing may be useful for a variety of applications, including analyte characterization by polynucleotide sequencing. The compositions, methods, systems, and devices disclosed herein generally describe barcoded oligonucleotides, which can be bound to a bead, such as a gel bead, useful for characterizing one or more analytes including, for example, protein (e.g., cell surface or intracellular proteins), genomic DNA, and RNA (e.g., mRNA or CRISPR guide RNAs). Also described herein, are barcoded labelling agents and oligonucleotide molecules useful for “tagging” analytes for characterization.
    Type: Application
    Filed: August 24, 2022
    Publication date: June 29, 2023
    Inventors: Phillip Belgrader, Zachary Bent, Rajiv Bharadwaj, Vijay Kumar Sreenivasa Gopalan, Josephine Harada, Christopher Hindson, Mohammad Rahimi Lenji, Michael Ybarra Lucero, Geoffrey McDermott, Elliott Meer, Tarjei Sigurd Mikkelsen, Christopher Joachim O'Keeffe, Katherine Pfeiffer, Andrew D. Price, Paul Ryvkin, Serge Saxonov, John R. Stuelpnagel, Jessica Michele Terry, Tobias Daniel Wheeler, Indira Wu, Solongo Batjargal Ziraldo, Stephane Claude Boutet, Sarah Taylor, Niranjan Srinivas
  • Publication number: 20220195420
    Abstract: Methods and systems are provided for sample preparation techniques and sequencing of macromolecular constituents of cells and other biological materials.
    Type: Application
    Filed: November 2, 2021
    Publication date: June 23, 2022
    Inventors: Zahra Kamila Belhocine, Rajiv Bharadwaj, Christopher Hindson, Michael Schnall-Levin, Bill Kengli Lin, Anthony Makarewicz, Pranav Patel, Katherine Pfeiffer, Andrew D. Price, Mohammad Rahimi Lenji, Tobias Daniel Wheeler, Yifeng Yin
  • Publication number: 20220106641
    Abstract: The present disclosure provides compositions, methods, systems, and devices for polynucleotide processing and analyte characterization. Such polynucleotide processing may be useful for a variety of applications, including analyte characterization by polynucleotide sequencing. The compositions, methods, systems, and devices disclosed herein generally describe barcoded oligonucleotides, which can be bound to a bead, such as a gel bead, useful for characterizing one or more analytes including, for example, protein (e.g., cell surface or intracellular proteins), genomic DNA, and RNA (e.g., mRNA or CRISPR guide RNAs). Also described herein, are barcoded labelling agents and oligonucleotide molecules useful for “tagging” analytes for characterization.
    Type: Application
    Filed: September 13, 2021
    Publication date: April 7, 2022
    Inventors: Phillip BELGRADER, Zachary BENT, Rajiv BHARADWAJ, Vijay Kumar Sreenivasa GOPALAN, Josephine HARADA, Christopher HINDSON, Mohammad Rahimi LENJI, Michael Ybarra LUCERO, Geoffrey McDERMOTT, Elliott MEER, Tarjei Sigurd MIKKELSEN, Christopher Joachim O'KEEFFE, Katherine PFEIFFER, Andrew D. PRICE, Paul RYVKIN, Serge SAXONOV, John R. STUELPNAGEL, Jessica Michele TERRY, Tobias Daniel WHEELER, Indira WU, Solongo Batjargal ZIRALDO, Stephane Claude BOUTET, Sarah TAYLOR, Niranjan SRINIVAS
  • Publication number: 20220080424
    Abstract: Disclosed are devices, systems, kits, and methods for controlling liquid flow and, e.g., in particular, for forming droplet having substantially uniform droplet-to-droplet content. The devices, systems, and kits may include a first channel including a funnel or may include a first channel and a first-side channel, the first channel being in fluid communication with a droplet formation region. The devices, systems, and kits may further include a second channel fluidically connected to the first channel or the first side-channel. Funnels and/or side-channels may be used to enhance the control over particle spacing in the channels, thereby providing superior control over the number of particles of the same kind in formed droplets. The devices, systems, and kits of the invention may further include a mixer downstream of a channel intersection. Mixers can be used to reduce localized pockets of high concentration of dissolved ingredients.
    Type: Application
    Filed: June 24, 2021
    Publication date: March 17, 2022
    Inventors: Ivan AKHREMICHEV, Rajiv BHARADWAJ, Lynna CHEN, Francis CUI, Rachel GERVER, Mohammad Rahimi LENJI, Bill Kengli LIN, Anthony MAKAREWICZ, Martin SAUZADE, Astha TANNA, Fernandino VALDECANAS, Tobias Daniel WHEELER, Yiran ZHANG, Alireza SALMANZADEH
  • Publication number: 20210387195
    Abstract: Devices, systems, and their methods of use, for generating and collecting droplets are provided. The device includes a collection region comprising a side wall canted at an angle. The invention further provides multiplex devices that increase droplet formation.
    Type: Application
    Filed: August 27, 2021
    Publication date: December 16, 2021
    Inventors: Ivan AKHREMICHEV, Rajiv BHARADWAJ, Lynna CHEN, Mohammad Rahimi LENJI, Alireza SALMANZADEH, Martin SAUZADE, Tobias Daniel WHEELER, Yiran ZHANG
  • Patent number: 11193122
    Abstract: Methods and systems are provided for sample preparation techniques and sequencing of macromolecular constituents of cells and other biological materials.
    Type: Grant
    Filed: March 22, 2021
    Date of Patent: December 7, 2021
    Assignee: 10X GENOMICS, INC.
    Inventors: Zahra Kamila Belhocine, Rajiv Bharadwaj, Christopher Hindson, Michael Schnall-Levin, Bill Kengli Lin, Anthony Makarewicz, Pranav Patel, Andrew D. Price, Mohammad Rahimi Lenji, Tobias Daniel Wheeler, Yifeng Yin
  • Publication number: 20210372998
    Abstract: The present disclosure provides compositions, methods, systems, and devices for polynucleotide processing and antigen screening. Polynucleotide processing may be useful for a variety of applications. Antigen screening may comprise the use of one or more engineered cells. Engineered cells may be useful for characterizing one or more analytes including, for example, a polypeptide antigen.
    Type: Application
    Filed: March 22, 2021
    Publication date: December 2, 2021
    Inventors: Zahra Kamila Belhocine, Jason Bell, Zachary Bent, Rajiv Bharadwaj, Christopher Hindson, Mohammad Rahimi Lenji, Bill Kengli Lin, Anthony Makarewicz, Geoffrey McDermott, Elliott Meer, Francesca Meschi, Tarjei Sigurd Mikkelsen, Christopher Joachim O'Keeffe, Katherine Pfeiffer, Andrew D. Price, Paul Ryvkin, Michael Schnall-Levin, Sarah Taylor, Jessica Michele Terry, Tobias Daniel Wheeler, Yifeng Yin, Xinying Zheng, Solongo Batjargal Ziraldo, Eswar Prasad Ramachandran Iyer, Luigi Jhon Alvarado Martinez
  • Publication number: 20210293693
    Abstract: Devices, systems, and their methods of use, for detecting and/or sorting droplets or particles are provided. One or more sorters can be selected to sort droplets or particles of a desired and predictable property or droplet size. The invention involves detection of droplets or particles from a droplet or particle source through a detection region.
    Type: Application
    Filed: June 9, 2021
    Publication date: September 23, 2021
    Inventors: Rajiv BHARADWAJ, Jianying CAO, Mohammad Rahimi LENJI, Anthony MAKAREWICZ, Alireza SALMANZADEH
  • Publication number: 20210222158
    Abstract: Methods and systems are provided for sample preparation techniques and sequencing of macromolecular constituents of cells and other biological materials.
    Type: Application
    Filed: March 22, 2021
    Publication date: July 22, 2021
    Inventors: Zahra Kamila Belhocine, Rajiv Bharadwaj, Christopher Hindson, Michael Schnall-Levin, Bill Kengli Lin, Anthony Makarewicz, Pranav Patel, Katherine Pfeiffer, Andrew D. Price, Mohammad Rahimi Lenji, Tobias Daniel Wheeler, Yifeng Yin
  • Publication number: 20210130892
    Abstract: The present disclosure provides compositions, methods, systems, and devices for polynucleotide processing and analyte characterization. Such polynucleotide processing may be useful for a variety of applications, including analyte characterization by polynucleotide sequencing. The compositions, methods, systems, and devices disclosed herein generally describe barcoded oligonucleotides, which can be bound to a bead, such as a gel bead, useful for characterizing one or more analytes including, for example, protein (e.g., cell surface or intracellular proteins), genomic DNA, and RNA (e.g., mRNA or CRISPR guide RNAs). Also described herein, are barcoded labelling agents and oligonucleotide molecules useful for “tagging” analytes for characterization.
    Type: Application
    Filed: October 29, 2020
    Publication date: May 6, 2021
    Inventors: Phillip Belgrader, Zachary Bent, Rajiv Bharadwaj, Vijay Kumar Sreenivasa Gopalan, Josephine Harada, Christopher Hindson, Mohammad Rahimi Lenji, Michael Ybarra Lucero, Geoffrey McDermott, Elliott Meer, Tarjei Sigurd Mikkelsen, Christopher Joachim O'Keeffe, Katherine Pfeiffer, Andrew D. Price, Paul Ryvkin, Serge Saxonov, John R. Stuelpnagel, Jessica Michele Terry, Tobias Daniel Wheeler, Indira Wu, Solongo Batjargal Ziraldo, Stephane Claude Boutet, Sarah Taylor, Niranjan Srinivas
  • Publication number: 20210102936
    Abstract: The present disclosure provides compositions, methods, systems, and devices for polynucleotide processing and analyte characterization from a single cell. Such polynucleotide processing may be useful for a variety of applications. The compositions, methods, systems, and devices disclosed herein generally describe barcoded oligonucleotides, which can be bound to a bead, such as a gel bead, useful for characterizing one or more analytes including, for example, protein (e.g., cell surface or intracellular proteins) and chromatin (e.g., accessible chromatin).
    Type: Application
    Filed: June 9, 2020
    Publication date: April 8, 2021
    Inventors: Zahra Kamila Belhocine, Jason Bell, Zachary Bent, Rajiv Bharadwaj, Christopher Hindson, Mohammad Rahimi Lenji, Bill Lin, Anthony Makarewicz, Geoffrey McDermott, Elliott Meer, Francesca Meschi, Tarjei Sigurd Mikkelsen, Christopher Joachim O'Keeffe, Katherine Pfeiffer, Andrew D. Price, Paul Ryvkin, Michael Schnall-Levin, Sarah Taylor, Jessica Michele Terry, Tobias Daniel Wheeler, Yifeng Yin, Xinying Zheng, Solongo Batjargal Ziraldo, Eswar Prasad Ramachandran Iyer, Luigi Jhon Alvarado Martinez
  • Publication number: 20210053063
    Abstract: The invention provides kits, devices, methods, and systems for forming droplets or particles and methods of their use. The devices may be used to form droplets of a size suitable for utilization as microscale chemical reactors, e.g., for genetic sequencing. In general, droplets are formed in a device by flowing a first liquid through a channel and into a droplet formation region including a second liquid, i.e., the continuous phase. The invention allows for more efficient recovery of droplets or processed droplets.
    Type: Application
    Filed: August 20, 2020
    Publication date: February 25, 2021
    Applicant: 10X Genomics, Inc.
    Inventors: Mohammad Rahimi LENJI, Rajiv BHARADWAJ
  • Publication number: 20200391211
    Abstract: Provided are microfluidics systems, devices, and networks for generating partitions. The microfluidics systems, devices, and networks may facilitate efficient merging of one or more channels in a microfluidic network and prevent blockage of a channel segment, such as by gas (e.g., air) bubbles or by one or more particles in a fluid.
    Type: Application
    Filed: April 27, 2020
    Publication date: December 17, 2020
    Inventors: Tobias Daniel WHEELER, Bill Kengli LIN, Mohammad Rahimi LENJI, Anthony MAKAREWICZ, Rajiv BHARADWAJ
  • Publication number: 20200165603
    Abstract: Methods and systems are provided for sample preparation techniques and sequencing of macromolecular constituents of cells and other biological materials.
    Type: Application
    Filed: May 22, 2019
    Publication date: May 28, 2020
    Inventors: Kamila Belhocine, Rajiv Bharadwaj, Christopher Hindson, Michael Schnall-Levin, Bill Kengli Lin, Anthony Makarewicz, Pranav Patel, Katherine Pfeiffer, Andrew D. Price, Mohammad Rahimi Lenji, Tobias Daniel Wheeler, Yifeng Yin
  • Publication number: 20200024596
    Abstract: Methods and systems are provided for sample preparation techniques and sequencing of macromolecular constituents of cells and other biological materials.
    Type: Application
    Filed: May 22, 2019
    Publication date: January 23, 2020
    Inventors: Kamila Belhocine, Rajiv Bharadwaj, Christopher Hindson, Michael Schnall-Levin, Bill Kengli Lin, Anthony Makarewicz, Pranav Patel, Katherine Pfeiffer, Andrew D. Price, Mohammad Rahimi Lenji, Tobias Daniel Wheeler, Yifeng Yin
  • Publication number: 20200002764
    Abstract: The present disclosure provides compositions, methods, systems, and devices for polynucleotide processing and analyte characterization. Such polynucleotide processing may be useful for a variety of applications, including analyte characterization by polynucleotide sequencing. The compositions, methods, systems, and devices disclosed herein generally describe barcoded oligonucleotides, which can be bound to a bead, such as a gel bead, useful for characterizing one or more analytes including, for example, protein (e.g., cell surface or intracellular proteins), genomic DNA, and RNA (e.g., mRNA or CRISPR guide RNAs). Also described herein, are barcoded labelling agents and oligonucleotide molecules useful for “tagging” analytes for characterization.
    Type: Application
    Filed: June 17, 2019
    Publication date: January 2, 2020
    Inventors: Phillip Belgrader, Zachary Bent, Rajiv Bharadwaj, Vijay Kumar Sreenivasa Gopalan, Josephine Harada, Christopher Hindson, Mohammad Rahimi Lenji, Michael Ybarra Lucero, Geoffrey McDermott, Elliott Meer, Tarjei Sigurd Mikkelsen, Christopher Joachim O'Keeffe, Katherine Pfeiffer, Andrew D. Price, Paul Ryvkin, Serge Saxonov, John R. Stuelpnagel, Jessica Michele Terry, Tobias Daniel Wheeler, Indira Wu, Solongo Batjargal Ziraldo, Stephane Claude Boutet, Sarah Taylor, Niranjan Srinivas