Abstract: In a code processing method, a computing device determines a source branch and a target branch of a software development project, where the source branch includes a plurality of commit codes, and the plurality of commit codes include a first commit code and a second commit code. The computing device presents the first commit code and the second commit code associated with the first commit code to a user, and performs code merging on the first commit code, some or all of second commit codes, and a commit code in the target branch according to user input.

Abstract: The present invention provides methods and systems for a multimodal, portable imaging platform that can be easily installed on a mobile phone or other mobile communication devices carrying a camera. The portable imaging system includes an electronic device with a camera, a base attachment, and at least two interchangeable imaging heads. The base attachment is configured to connect to the digital device on one side and at least two removable, interchangeable imaging heads on the other side. The connected imaging head is in optical communication with the camera. Switching between different imaging modalities is as simple as switching between the interchangeable imaging heads. Each removable imaging head contains its own light source (or is optically connected to a laser diode disposed in the base attachment), lens, and/or optical filters that can be attached quickly to the same base attachment.

Abstract: Methods of extracting analytes of interest from biological samples including soft plant tissues (e.g., plant leaves) or animal tissues are described. The methods include contacting the biological samples with a microneedle that absorbs the analyte of interest. Related systems and methods of detecting pathogens or pests or of genotyping the plant or animal from which the biological sample is derived are described. Also described are methods of delivering a substance of interest (e.g., a pesticide) to a plant by contacting a soft plant tissue with a microneedle coated with the substance of interest.

Abstract: A multi-well plate reader device includes an opto-mechanical attachment configured to attach/detach to a portable electronic device having a camera. The reader includes a plurality of excitation illumination sources and a slot that receives a well plate. Excitation and emission filters are incorporated into the housing. Optical fibers are located in the attachment and transmit fluorescent light emitted from the wells of the well plate through an optional lens and into the camera. The optical fibers have an input end adjacent to the wells and an output end formed in a header, wherein, in one embodiment, multiple optical fibers are positioned within a cross-sectional area projection defined by the wells and wherein the output ends of optical fibers are mounted in the header. The pattern of the optical fibers is mapped to individual wells in a calibration operation and stored in a fiber map.

Abstract: The concentration of mercury in a sample is measured by a reader secured to a camera-containing mobile electronic device. The reader has holders for sample and control solutions. First and second light sources emitting light at different colors illuminate the sample and control holders. Each holder contains gold nanoparticles, thymine-rich aptamers, and sodium chloride. The light sources illuminate the sample and control holders. An image is captured of the transmitted light through the sample and control holders, wherein the image comprises two control regions of interest and two sample regions of interest. The device calculates the intensity of the two control regions of interest and the two sample regions of interest and generates intensity ratios for the sample and control, respectively, at each color. The device calculates a normalized color ratio based on the intensity ratios and outputs a concentration of mercury based on the normalized color ratio.

Abstract: A device and method for imaging fluorescently labeled molecules (e.g., nucleic acids) includes securing a modular attachment device to the mobile phone with a sample containing stretched, fluorescently labeled nucleic acid molecules and illuminating the sample with excitation light to cause the fluorescently labeled nucleic acid molecules to emit fluorescent light. Images of the nucleic acids are captured using a camera of the mobile phone. The images from the mobile phone are transferred to a remote computer for image processing and analysis. The images are processed by the remote computer to generate analysis data of sample, wherein the analysis data includes the length of nucleic acid molecules contained in the sample or the length of molecular sub-region(s). The mobile phone or another computing device receives from the remote computer the analysis data and displays at least some of the analysis data thereon.

Abstract: A device and method for imaging fluorescently labeled molecules (e.g., nucleic acids) includes securing a modular attachment device to the mobile phone with a sample containing stretched, fluorescently labeled nucleic acid molecules and illuminating the sample with excitation light to cause the fluorescently labeled nucleic acid molecules to emit fluorescent light. Images of the nucleic acids are captured using a camera of the mobile phone. The images from the mobile phone are transferred to a remote computer for image processing and analysis. The images are processed by the remote computer to generate analysis data of sample, wherein the analysis data includes the length of nucleic acid molecules contained in the sample or the length of molecular sub-region(s). The mobile phone or another computing device receives from the remote computer the analysis data and displays at least some of the analysis data thereon.

Abstract: The concentration of mercury in a sample is measured by a reader secured to a camera-containing mobile electronic device. The reader has holders for sample and control solutions. First and second light sources emitting light at different colors illuminate the sample and control holders. Each holder contains gold nanoparticles, thymine-rich aptamers, and sodium chloride. The light sources illuminate the sample and control holders. An image is captured of the transmitted light through the sample and control holders, wherein the image comprises two control regions of interest and two sample regions of interest. The device calculates the intensity of the two control regions of interest and the two sample regions of interest and generates intensity ratios for the sample and control, respectively, at each color. The device calculates a normalized color ratio based on the intensity ratios and outputs a concentration of mercury based on the normalized color ratio.

Abstract: A field-portable fluorescence imaging platform is disclosed that is installed on mobile communications device for imaging of individual nanoparticles or microparticles such as viruses, bacterial, and the like using a light-weight and compact opto-mechanical attachment or housing configured to be removably secured to the mobile communication device. The housing includes a sample holder configured to hold a sample along with a light source and a lens or lens system that is positioned generally opposite the lens in the mobile communication device. An optical filter is disposed in the housing and is interposed between the lens of the housing and the lens of the mobile communication device. A z-adjust stage is disposed in the housing and coupled to the sample holder, the z-adjust stage is configured to adjust the position of the sample holder in a z direction along an optical path passing through the lenses and onto an image sensor contained in the mobile communication device.