Abstract: A system and method for determining complexity of a computer subroutine having a plurality of statements, during development of the subroutine is disclosed. The method includes analyzing the plurality of statements and computing a complexity factor for a completed portion of the subroutine. The steps of analyzing the subroutine and computing a complexity factor are repeated following input of another statement into the subroutine. A system for determining complexity of a subroutine comprises an analyzer operable to analyze the statements and compute a complexity factor following the input of one of the plurality of statements.

Abstract: A computer system (1) for analyzing nucleic acid sequences is provided. The computer system is used to perform multiple methods for determining unknown bases by analyzing the fluorescence intensities of hybridized nucleic acid probes. The results of individual experiments may be improved by processing nucleic acid sequences together. Comparative analysis of multiple experiments is also provided by displaying reference sequences in one area (814) and sample sequences in another area (816) on a display device (3).