Patents Assigned to Diversa Corporation, a Delaware Corporation
  • Publication number: 20030096220
    Abstract: Provided are methods of screening and identification of bioactivities and bioactive molecules of interest using a capillary array system. More specifically, disclosed are methods of using optical detection and capillary array-based techniques for screening libraries and recovering bioactive molecules having a desired activity or a nucleic acid sequence encoding such bioactive molecules.
    Type: Application
    Filed: May 28, 2002
    Publication date: May 22, 2003
    Applicant: Diversa Corporation, a Delaware corporation
    Inventors: William Michael Lafferty, Jay M. Short, Martin Keller
  • Publication number: 20030092022
    Abstract: Provided is a method of screening or enriching a sample containing polynucleotides from a mixed population of organisms. The method includes creating a DNA library from a plurality of nucleic acid sequences of a mixed population of organisms and separating clones containing a polynucleotide sequence of interest on a fluorescence analyzer based upon hybridization of a fluorescence labeled oligonucleotide probe to a target sequence in a clone. The separated or enrich library can then be further process by activity based screening or sequence based screening. In addition, the enriched sequence can be compared to a database and to identify sequences in the database which have homology to a clone in the library thereby obtaining a nucleic acid profile of the mixed population of organisms.
    Type: Application
    Filed: May 13, 2002
    Publication date: May 15, 2003
    Applicant: Diversa Corporation, a Delaware corporation
    Inventors: Jay M. Short, Martin Keller
  • Publication number: 20030083575
    Abstract: A sample screening platform, system and method for screening and recovery of detectable samples. The platform includes a capillary array including a plurality of capillaries. Each capillary includes at least one wall defining a lumen for retaining the detectable sample. The detectable sample is introduced to and retained in the lumen by capillary forces. In a method of incubating the sample, a second liquid is introduced into the capillary containing the sample. A detection and recovery system includes an optical system for detecting the sample, and a recovery mechanism adapted to contact a capillary containing the sample. The recovery mechanism is further adapted to recover the sample from the capillary, and expel the recovered sample for analysis.
    Type: Application
    Filed: September 4, 2002
    Publication date: May 1, 2003
    Applicant: Diversa Corporation, a Delaware corporation
    Inventor: William Michael Lafferty
  • Publication number: 20030077677
    Abstract: Provided is a method of screening or enriching a sample containing polynucleotides from a mixed population of organisms. The method includes creating a DNA library from a plurality of nucleic acid sequences of a mixed population of organisms and separating clones containing a polynucleotide sequence of interest on a fluorescence analyzer based upon hybridization of a fluorescence labeled oligonucleotide probe to a target sequence in a clone. The separated or enrich library can then be further process by activity based screening or sequence based screening. In addition, the enriched sequence can be compared to a database and to identify sequences in the database which have homology to a clone in the library thereby obtaining a nucleic acid profile of the mixed population of organisms.
    Type: Application
    Filed: May 13, 2002
    Publication date: April 24, 2003
    Applicant: Diversa Corporation, a Delaware corporation
    Inventors: Jay M. Short, Martin Keller
  • Publication number: 20030077620
    Abstract: Provided is a method of screening or enriching a sample containing polynucleotides from a mixed population of organisms. The method includes creating a DNA library from a plurality of nucleic acid sequences of a mixed population of organisms and separating clones containing a polynucleotide sequence of interest on a fluorescence analyzer based upon hybridization of a fluorescence labeled oligonucleotide probe to a target sequence in a clone. The separated or enrich library can then be further process by activity based screening or sequence based screening. In addition, the enriched sequence can be compared to a database and to identify sequences in the database which have homology to a clone in the library thereby obtaining a nucleic acid profile of the mixed population of organisms.
    Type: Application
    Filed: May 13, 2002
    Publication date: April 24, 2003
    Applicant: Diversa Corporation, a Delaware Corporation
    Inventors: Jay M. Short, Martin Keller
  • Publication number: 20030044968
    Abstract: Provided are methods of screening and identification of bioactivities and bioactive molecules of interest using a capillary array system. More specifically, disclosed are methods of using optical detection and capillary array-based techniques for screening libraries and recovering bioactive molecules having a desired activity or a nucleic acid sequence encoding such bioactive molecules.
    Type: Application
    Filed: May 28, 2002
    Publication date: March 6, 2003
    Applicant: Diversa Corporation, a Delaware corporation
    Inventors: William Michael Lafferty, Jay M. Short, Martin Keller
  • Publication number: 20030013115
    Abstract: A sample screening platform, system and method for screening and recovery of detectable samples. The platform includes a capillary array including a plurality of capillaries. Each capillary includes at least one wall defining a lumen for retaining the detectable sample. The detectable sample is introduced to and retained in the lumen by capillary forces. In a method of incubating the sample, a second liquid is introduced into the capillary containing the sample. A detection and recovery system includes an optical system for detecting the sample, and a recovery mechanism adapted to contact a capillary containing the sample. The recovery mechanism is further adapted to recover the sample from the capillary, and expel the recovered sample for analysis.
    Type: Application
    Filed: September 4, 2002
    Publication date: January 16, 2003
    Applicant: Diversa Corporation, a Delaware corporation
    Inventor: William Michael Lafferty
  • Publication number: 20020001809
    Abstract: Disclosed is a process for identifying clones having a specified activity of interest, which process comprises (i) generating one or more expression libraries derived from nuclei acid directly isolated from the environment; and (ii) screening said libraries utilizing a fluorescence activated cell sorter to identify said clones. More particularly, this is a process for identifying clones having a specified activity of interest by (i) generating one or more expression libraries derived from nucleic acid directly or indirectly isolated from the environment; (ii) exposing said libraries to a particular substrate or substrates of interest; and (iii) screening said exposed libraries utilizing a fluorescence activated cell sorter to identify clones which react with the substrate or substrates.
    Type: Application
    Filed: May 3, 2001
    Publication date: January 3, 2002
    Applicant: Diversa Corporation, a Delaware Corporation
    Inventors: Jay M. Short, Martin Keller