Patents Examined by Mohammad Meah
  • Patent number: 7259007
    Abstract: The present invention relates to the elimination of mannosylphosphorylation on the glycans of glycoproteins in the yeast genus Pichia. The elimination of mannosylphosphorylated glycoproteins results from the disruption of the PNO1 gene and the newly isolated P. pastoris MNN4B gene. The present invention further relates to methods for producing modified glycan structures in host cells that are free of glycan mannosylphosphorylation.
    Type: Grant
    Filed: December 22, 2004
    Date of Patent: August 21, 2007
    Assignee: GlycoFi, Inc.
    Inventors: Piotr Bobrowicz, Terrance A. Stadheim, Stefan Wildt
  • Patent number: 7220570
    Abstract: The present invention provides polypeptides and polynucleotides involved in amino acid biosynthesis in Methylophilus methylotrophus and methods of producing amino acids in microorganisms having enhanced or attenuated expression of these polypeptides and/or polynucleotides.
    Type: Grant
    Filed: September 22, 2005
    Date of Patent: May 22, 2007
    Assignee: Ajinomoto Co., Inc.
    Inventors: Yoshihiro Usuda, Yousuke Nishio, Hisashi Yasueda, Shinichi Sugimoto
  • Patent number: 7214526
    Abstract: The invention relates to mutants and alleles of the coryneform bacterium mqo gene which encodes malate quinone oxidoreductases which contain any amino acid apart from L-serine at position 111, or a comparable position, in the amino acid sequence, and to processes for fermentatively preparing amino acids, preferably L-lysine, L-tryptophan and L-proline, using bacteria which comprise these alleles.
    Type: Grant
    Filed: January 18, 2006
    Date of Patent: May 8, 2007
    Assignee: Degussa AG
    Inventors: Brigitte Bathe, Stephan Hans, Natalie Schischka, Georg Thierbach
  • Patent number: 7198921
    Abstract: The present invention intends to find out a gene participating in addition of mannose phosphate to a sugar chain of a glycoprotein originating in a yeast belonging to the genus Pichia and provide a means of controlling the same. The present invention also intends to provide a process for producing a protein with reduction of an acidic sugar chain by using the thus controlled yeast strain belonging to the genus Pichia. Namely, the present invention includes a protein participating in the addition of mannose phosphate to a sugar chain of a glycoprotein; a gene encoding this protein; a mutant of this gene; a vector carrying the mutant gene; a yeast strain belonging to the genus Pichia having been transformed by this vector; a process for producing a protein with reduction of an acidic sugar chain by using the transformed yeast strain; and a glycoprotein thus produced.
    Type: Grant
    Filed: May 16, 2001
    Date of Patent: April 3, 2007
    Assignee: Mitsubishi Pharma Corporation
    Inventors: Masami Miura, Masaaki Hirose, Taeko Miwa, Hiroyuki Irie, Shinobu Kuwae, Kenmi Miyano, Wataru Otani, Hideyuki Ohi
  • Patent number: 7179647
    Abstract: The invention relates to a novel elongase gene with the sequence SEQ ID NO: 1 or its homologs, derivatives or analogs, to a gene construct comprising this gene or its homologs, derivatives and analogs, and to its use. The invention also relates to vectors or organisms comprising an elongase gene with the sequence SEQ ID No: 1 or its homologs, derivatives or analogs. Furthermore, the invention relates to a process for the preparation of polyunsaturated fatty acids and to a process for introducing DNA into organisms which produce large amounts of oils and, in particular, oils with a high content of unsaturated fatty acids. Moreover, the invention relates to an oil and/or a fatty acid preparation with a higher content of polyunsaturated fatty acids with at least two double bonds and/or a triacyiglycerol preparation with a higher content of polyunsaturated fatty acids with at least two double bonds.
    Type: Grant
    Filed: January 13, 2003
    Date of Patent: February 20, 2007
    Assignee: BASF Plant Science GmbH
    Inventors: Jens Lerchl, Ernst Heinz, Thorsten Zank
  • Patent number: 7172890
    Abstract: The present invention relates to oxidoreductase apoenzyme variants which are enzymatically inactive but have coenzyme-binding properties. Further, the present invention relates to DNA sequences encoding these oxidoreductase apoenzyme variants, expression vectors containing such DNA sequences and the use of these oxidoreductase apoenzyme variants in diagnostic applications.
    Type: Grant
    Filed: October 28, 2004
    Date of Patent: February 6, 2007
    Assignee: Roche Diagnostics GmbH
    Inventors: Zhixin Shao, Joachim Hoenes, Carina Horn, Wolfgang-Reinhold Knappe, Rainer Schmuck
  • Patent number: 7166453
    Abstract: We disclose a PS4 variant polypeptide derivable from a parent polypeptide, the parent polypeptide having non-maltogenic exoamylase activity, which PS4 variant polypeptide comprises one or more of the following substitutions: G69P, A141P, G223A, A268P, G313P, S399P and G400P, with reference to the position numbering of a Pseudomonas saccharophilia exoamylase sequence shown as SEQ ID NO: 1. Such PS4 variant polypeptides may be used as exo-amylases, particularly as non-maltogenic exoamylases. Combinations of such PS4 variant polypeptides together with Novamyl are disclosed.
    Type: Grant
    Filed: June 10, 2004
    Date of Patent: January 23, 2007
    Assignee: Danisco A/S
    Inventors: Karsten Matthias Kragh, Harm Mulder, Steffen Petersen, Helle Fomsgaard, Oene Robert Veltman
  • Patent number: 7163815
    Abstract: The present invention is directed to compositions and methods comprising NAD(P)H oxidases, particularly bacterial oxidases, nucleic acids, recombinant plasmid vectors and recombinant proteins therein encoded, and host cells comprising the oxidases and nucleic acids. The present invention also comprises an isolated bacterial oxidase that oxidizes both NADH and NADPH. Methods for producing the enzymes and enzymatic reactions comprising use of NAD(P)H oxidases and products of such reactions are also disclosed.
    Type: Grant
    Filed: January 28, 2005
    Date of Patent: January 16, 2007
    Assignee: Georgia Tech Research Corporation
    Inventors: Bettina Riebel-Bommarius, Andreas Bommarius, Phillip Gibbs, William Wellborn
  • Patent number: 7138228
    Abstract: Post-translational O-sulfonation of a serine or threonine residue of proteins is detected, optionally comparatively, wherein the detected O-sulfonation is detected under a first physiological condition, and is compared with a control O-sulfonation detected under a second physiological condition, and a difference between the detected and control O-sulfonations indicates a difference between the first and second physiological conditions. Predetermined changes in physiological conditions are used to infer specific changes in O-sulfonation. Proteins are modified by introducing a predetermined change in O-sulfonation at a serine or threonine residue of the protein, and optionally, detecting a resultant change in O-sulfonation. These methods include introducing or increasing O-sulfonation, eliminating or reducing O-sulfonation; and derivatizing or substituting O-sulfonation.
    Type: Grant
    Filed: September 5, 2003
    Date of Patent: November 21, 2006
    Assignees: Regents of the University of California, Yeda Research and Development Co. Ltd. at the Weizmann Institute of Science
    Inventors: Alma L. Burlingame, Katalin F. Medzihradszky, Zsuzsanna Darula, Eran Perlson, Michael Fainzilber, Robert J. Chalkley, Darren Tyson, Ralph A. Bradshaw
  • Patent number: 7138264
    Abstract: The present invention discloses a modified tumor necrosis factor-alpha converting enzyme (TACE) catalytic domain, that unlike the native TACE catalytic domain, is stable at high protein concentrations. The present invention further discloses methods for generating crystals of the modified TACE protein in protein-ligand complexes with a number of inhibitors. In addition, the present invention discloses methods of using the proteins, crystals and/or three-dimensional structures obtained to identify compounds that can modulate the enzymatic activity of TACE.
    Type: Grant
    Filed: May 21, 2003
    Date of Patent: November 21, 2006
    Assignee: Schering Corporation
    Inventors: Brian M. Beyer, Richard N. Ingram, Peter Orth, Corey Strickland
  • Patent number: 7122367
    Abstract: The present invention relates to diacylglycerol acyltransferase genes and proteins, and methods of their use. In particular, the invention describes genes and proteins that exhibit both long-chain acyltransferase and acetyltransferase activity. The present invention encompasses both native and recombinant wild-type forms of the transferase, as well as mutants and variant forms, some of which possess altered characteristics relative to the wild-type transferase. The present invention also relates to methods of using diacylglycerol acyltransferase genes and proteins, including in their expression in transgenic organisms and in the production of acetyl-glycerides in plant oils, and in particular seed oils.
    Type: Grant
    Filed: June 2, 2004
    Date of Patent: October 17, 2006
    Assignee: Board of Trustees Operating Michigan State University
    Inventors: Anne Milcamps, David A. Pan, Michael R. Pollard
  • Patent number: 7115735
    Abstract: The object of the present invention is to provide a novel dehydrogenase having a property which is different from that of known dehydrogenases. The present invention provides a dehydrogenase having the following physicochemical properties: (1) effect: to produce N-alkyl-L-alanine from pyruvic acid and alkylamine or dialkylamine using NADPH and/or NADH as coenzyme; (2) substrate specificity: to show activity to alkylamine or dialkylamine but not to ammonium; (3) optimal pH when using phenylpyruvic acid and methylamine as substrates is around 10; and (4) when treated at 30 ° C. for 30 minutes, the enzyme is stable at around pH 5 to 10.5.
    Type: Grant
    Filed: August 27, 2004
    Date of Patent: October 3, 2006
    Assignee: Mitsubishi Chemical Corporation
    Inventors: Nobuyoshi Esaki, Hisaaki Mihara, Mari Hara, Makoto Ueda
  • Patent number: 7098013
    Abstract: The object of the present invention is to provide a polypeptide which can be used to produce a saccharide having a structure of cyclo{?6)-?-D-glucopyranosyl-(1?3)-?-D-glucopyranosyl-(1?6)-?-D-glucopyranosyl-(1?3)-?-D-glucopyranosyl-(1?}, a DNA encoding the polypeptide, and uses thereof.
    Type: Grant
    Filed: November 16, 2001
    Date of Patent: August 29, 2006
    Assignee: Kabushiki Kaisha Hayashibara Seibutsu Kagaku Kenkyujo
    Inventors: Michio Kubota, Kazuhiko Maruta, Takuo Yamamoto, Shigeharu Fukuda
  • Patent number: 7094585
    Abstract: A DNA fragment encoding a ? subunit is obtained by inverse PCR using primers designed based on the nucleotide sequence of a N-terminal signal sequence region of a GDH ? subunit derived from Burkholderia cepacia KS1 strain.
    Type: Grant
    Filed: April 25, 2003
    Date of Patent: August 22, 2006
    Inventor: Koji Sode
  • Patent number: 7049089
    Abstract: Reagents which regulate human PLC delta-1 activity and reagents which bind to human PLC delta-1 gene products can be used, inter alia, to treat COPD, congestive heart failure, hypertension, and cancer, and a variety of conditions in which signal transduction is impaired.
    Type: Grant
    Filed: May 29, 2001
    Date of Patent: May 23, 2006
    Assignee: Bayer Aktiengesellschaft
    Inventor: Yonghong Xiao