Patents by Inventor Alejandro Soto-Gutierrez

Alejandro Soto-Gutierrez has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11866733
    Abstract: Methods are disclosed herein for efficiently generating human induced pluripotent stem cells (iPSC) containing a nucleic acid including a doxycycline promoter operably linked to a nucleic acid encoding Cas9. These methods include transfecting a human somatic cell with a nucleic acid molecule comprising a doxycycline promoter operably linked to a nucleic acid encoding a Cas9, and constitutive promoter operably linked to a tetracycline responsive element and inducing the somatic cell to form an iPSC, thereby producing an iPSC that can undergo CRISPR/Cas9-mediated recombination at a high efficiency. The human iPSC, or a cell differentiated therefrom, is cultured in the presence of doxycycline to induce expression of the Cas9. These cells can then be used to target in any gene of interest by introducing nucleic acids encoding sgRNAs. Induced pluripotent stem cells produced by these methods are also disclosed.
    Type: Grant
    Filed: July 31, 2017
    Date of Patent: January 9, 2024
    Assignee: University of Pittsburgh—Of the Commonwealth System of Higher Education
    Inventors: Alejandro Soto-Gutierrez, Alexandra Sylvie Collin de l'Hortet, Kan Handa, Jorge Guzman Lepe, Yang Wang, Kazuki Takeishi, Ira Jacob Fox
  • Patent number: 11530388
    Abstract: Methods are disclosed herein for producing human hepatocytes from human induced pluripotent stem cells. Also provided are transgenic rats for the expansion of human hepatocytes, such as those produced using the methods disclosed herein.
    Type: Grant
    Filed: February 13, 2018
    Date of Patent: December 20, 2022
    Assignee: University of Pittsburgh—Of the Commonwealth System of Higher Education
    Inventors: Alejandro Soto-Gutierrez, Tomoji Mashimo, Alexandra Sylvie Collin de l'Hortet, Eduardo Cervantes Alvarez, Jorge Guzman Lepe, Kan Handa, Kazuki Takeishi, Yang Wang, Branimir Popovic
  • Publication number: 20220362405
    Abstract: Disclosed are compositions and methods for treating a liver disease in a subject by increasing transport or retention of HNF4?, a transcriptional factor, into a nucleus of a hepatocyte in the subject. In some embodiments, the method comprises upregulating expression or function of one or more transcription factors selected from the group consisting of PROX1, NR5A2, NROB2, MTF1, SREBP1, EP300, and POM121C, and functional fragments thereof, and/or downregulating expression or function of one or more transcription factors DNAJB 1/F1SP40, ATF6, ATF4, and PERK, and functional fragments thereof.
    Type: Application
    Filed: October 14, 2020
    Publication date: November 17, 2022
    Inventors: Alejandro Soto Gutierrez, Aaron Bell, Nicolas Fraunhoffer Navarro, Jorge Guzman Lepe, Sarah Hainer, George K. Michalopoulos, Alina Ostrowska, Ira Fox, Edgar Naoe Tafaleng, Kazuki Takeishi
  • Publication number: 20220098548
    Abstract: One aspect of the invention provides a method for harvesting adult cells from an organ. The method includes perfusing the organ with a perfusate and isolating adult cells from the organ, thereby harvesting the adult cells from the organ. Another aspect of the invention provides a method for rehabilitating an organ. The method includes: dividing the organ into a first portion and a second portion, perfusing the first portion with a decellularization medium, isolating adult cells from the second portion, and recellularizing the first portion with a suspension of the adult cells, thereby rehabilitating the organ.
    Type: Application
    Filed: October 1, 2021
    Publication date: March 31, 2022
    Inventors: Martin Yarmush, Basak E. Uygun, Korkut Uygun, Maria-Louisa Izamis, Alejandro Soto-Gutierrez, Herman Tolboom, Hiroshi Yagi, Carley Shulman, Jack Milwid
  • Patent number: 11136553
    Abstract: One aspect of the invention provides a method for harvesting adult cells from an organ. The method includes perfusing the organ with a perfusate and isolating adult cells from the organ, thereby harvesting the adult cells from the organ. Another aspect of the invention provides a method for rehabilitating an organ. The method includes: dividing the organ into a first portion and a second portion, perfusing the first portion with a decellularization medium, isolating adult cells from the second portion, and recellularizing the first portion with a suspension of the adult cells, thereby rehabilitating the organ.
    Type: Grant
    Filed: April 7, 2015
    Date of Patent: October 5, 2021
    Assignees: Massachusetts Institute of Technology, The General Hospital Corporation
    Inventors: Martin Yarmush, Basak E. Uygun, Korkut Uygun, Maria-Louisa Izamis, Alejandro Soto-Gutierrez, Herman Tolboom, Hiroshi Yagi, Carley Shulman, Jack Milwid
  • Publication number: 20190376029
    Abstract: Methods are disclosed herein for producing human hepatocytes from human induced pluripotent stem cells. Also provided are transgenic rats for the expansion of human hepatocytes, such as those produced using the methods disclosed herein.
    Type: Application
    Filed: February 13, 2018
    Publication date: December 12, 2019
    Applicant: University of Pittsburgh - Of the Commonwealth System of Higher Education
    Inventors: Alejandro Soto-Gutierrez, Tomoji Mashimo, Alexandra Sylvie Collin de l'Hortet, Eduardo Cervantes Alvarez, Jorge Guzman Lepe, Kan Handa, Kazuki Takeishi, Yang Wang, Branimir Popovic
  • Publication number: 20190185819
    Abstract: Methods are disclosed herein for efficiently generating human induced pluripotent stem cells (iPSC) containing a nucleic acid including a doxycycline promoter operably linked to a nucleic acid encoding Cas9. These methods include transfecting a human somatic cell with a nucleic acid molecule comprising a doxycycline promoter operably linked to a nucleic acid encoding a Cas9, and constitutive promoter operably linked to a tetracycline responsive element and inducing the somatic cell to form an iPSC, thereby producing an iPSC that can undergo CRISPR/Cas9-mediated recombination at a high efficiency. The human iPSC, or a cell differentiated therefrom, is cultured in the presence of doxycycline to induce expression of the Cas9. These cells can then be used to target in any gene of interest by introducing nucleic acids encoding sgRNAs. Induced pluripotent stem cells produced by these methods are also disclosed.
    Type: Application
    Filed: July 31, 2017
    Publication date: June 20, 2019
    Applicant: University of Pittsburgh - Of the Commonwealth System of Higher Education
    Inventors: Alejandro Soto-Gutierrez, Alexandra Sylvie Collin de l'Hortet, Kan Handa, Jorge Guzman Lepe, Yang Wang, Kazuki Takeishi, Ira Jacob Fox
  • Patent number: 9981048
    Abstract: The presently disclosed invention is directed to the discovery that hepatocyte nuclear factor 4 alpha (HNF4?; also known as NR2A1), a transcription factor, reverses hepatocyte dysfunction in an animal model of cirrhosis, resulting in improvement in hepatic function, treatment of cirrhosis, and prolonged survival.
    Type: Grant
    Filed: February 11, 2014
    Date of Patent: May 29, 2018
    Assignee: UNIVERSITY OF PITTSBURGH—OF THE COMMONWEALTH SYSTEM OF HIGHER EDUCATION
    Inventors: Ira Jacob Fox, Aaron W. Bell, Taichiro N. Nishikawa, Alejandro Soto-Gutierrez, Yoram Vodovotz
  • Publication number: 20170049941
    Abstract: Provided herein are methods or making and using whole or partial organ ECM structures comprising an anticoagulant. Also provided are organ structures prepared according to those methods.
    Type: Application
    Filed: April 29, 2015
    Publication date: February 23, 2017
    Inventors: Alejandro SOTO-GUTIERREZ, Kentaro MATSUBARA, Ken FUKUMITSU, Kan HANDA, Jorge Guzman LEPE, William R. WAGNER, Sang Ho YE, Hiroshi YAGI, Yuko KITAGAWA
  • Publication number: 20150322404
    Abstract: One aspect of the invention provides a method for harvesting adult cells from an organ. The method includes perfusing the organ with a perfusate and isolating adult cells from the organ, thereby harvesting the adult cells from the organ. Another aspect of the invention provides a method for rehabilitating an organ. The method includes: dividing the organ into a first portion and a second portion, perfusing the first portion with a decellularization medium, isolating adult cells from the second portion, and recellularizing the first portion with a suspension of the adult cells, thereby rehabilitating the organ.
    Type: Application
    Filed: April 7, 2015
    Publication date: November 12, 2015
    Applicants: MASSACHUSETTS INSTITUTE OF TECHNOLOGY, THE GENERAL HOSPITAL CORPORATION
    Inventors: Martin Yarmush, Basak E. Uygun, Korkut Uygun, Maria-Louisa Izamis, Alejandro Soto-Gutierrez, Herman Tolboom, Hiroshi Yagi, Carley Shulman, Jack Milwid
  • Publication number: 20140249209
    Abstract: The presently disclosed invention is directed to the discovery that hepatocyte nuclear factor 4 alpha (HNF4?; also known as NR2A1), a transcription factor, reverses hepatocyte dysfunction in an animal model of cirrhosis, resulting in improvement in hepatic function, treatment of cirrhosis, and prolonged survival.
    Type: Application
    Filed: February 11, 2014
    Publication date: September 4, 2014
    Applicant: University of Pittsburgh - of the Commonwealth System of Higher Education
    Inventors: Ira Jacob Fox, Aaron W. Bell, Taichiro N. Nishikawa, Alejandro Soto-Gutierrez
  • Publication number: 20130323708
    Abstract: One aspect of the invention provides a method for harvesting adult cells from an organ. The method includes perfusing the organ with a perfusate and isolating adult cells from the organ, thereby harvesting the adult cells from the organ. Another aspect of the invention provides a method for rehabilitating an organ. The method includes: dividing the organ into a first portion and a second portion, perfusing the first portion with a decellularization medium, isolating adult cells from the second portion, and recellularizing the first portion with a suspension of the adult cells, thereby rehabilitating the organ.
    Type: Application
    Filed: June 30, 2010
    Publication date: December 5, 2013
    Applicants: MASSACHUSETTS INSTITUTE OF TECHNOLOGY, THE GENERAL HOSPITAL CORPORATION
    Inventors: Martin Yarmush, Basak E. Uygun, Mustafa Korkut Uygun, Maria Louisa Izamis, Alejandro Soto-Gutierrez, Herman Tolboom, Hiroshi Yagi, Carley Shulman, John Miles Milwid