Patents by Inventor Bart Lee Staker

Bart Lee Staker has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20240069012
    Abstract: Methods and systems are provided for small molecule analyte detection using digital signals, key encryption, and communications protocols. The methods provide detection of a large numbers of proteins, peptides, RNA molecules, and DNA molecules in a single optical or electrical detection assay within a large dynamic range.
    Type: Application
    Filed: April 6, 2023
    Publication date: February 29, 2024
    Inventors: Bryan P. STAKER, Niandong LIU, Bart Lee STAKER, Michael David MCLAUGHLIN
  • Publication number: 20240052413
    Abstract: Disclosed herein are methods and systems for detection and discrimination of optical signals from a densely packed substrate. These have broad applications for biomolecule detection near or below the diffraction limit of optical systems, including in improving the efficiency and accuracy of polynucleotide sequencing applications.
    Type: Application
    Filed: December 21, 2021
    Publication date: February 15, 2024
    Inventors: Bryan P. STAKER, Niandong LIU, Michael David McLAUGHLIN, Bart Lee STAKER
  • Patent number: 11650202
    Abstract: Methods are provided for detecting a single compound analyte immobilized to a solid substrate by serially contacting and removing different probes to the same analyte.
    Type: Grant
    Filed: February 9, 2022
    Date of Patent: May 16, 2023
    Assignee: APTON BIOSYSTEMS, INC.
    Inventors: Bryan P. Staker, Niandong Liu, Bart Lee Staker, Michael David McLaughlin
  • Patent number: 11474107
    Abstract: Electrical detection methods are used to identify and further characterize single-molecule target analytes such as proteins and nucleic acids. A composition including a probe region and a tail region is contacted with a target analyte. The probe region specifically binds to the target analyte. The tail region is coupled to the probe region, and includes a nucleic acid template for polynucleotide synthesis. When conditions are such that polynucleotide synthesis occurs along the tail region, one hydrogen ion is released for every nucleotide that is incorporated into the tail region. A transistor such as an ISFET detects and measures changes in ion concentration, and these measurements can be used to identify the tail region and thus characterize the corresponding target analyte.
    Type: Grant
    Filed: March 16, 2022
    Date of Patent: October 18, 2022
    Assignee: APTON BIOSYSTEMS, INC.
    Inventors: Bryan P. Staker, Niandong Liu, Bart Lee Staker, Michael David McLaughlin
  • Patent number: 11435356
    Abstract: Electrical detection methods are used to identify and further characterize single-molecule target analytes such as proteins and nucleic acids. A composition including a probe region and a tail region is contacted with a target analyte. The probe region specifically binds to the target analyte. The tail region is coupled to the probe region, and includes a nucleic acid template for polynucleotide synthesis. When conditions are such that polynucleotide synthesis occurs along the tail region, one hydrogen ion is released for every nucleotide that is incorporated into the tail region. A transistor such as an ISFET detects and measures changes in ion concentration, and these measurements can be used to identify the tail region and thus characterize the corresponding target analyte.
    Type: Grant
    Filed: February 17, 2021
    Date of Patent: September 6, 2022
    Assignee: APTON BIOSYSTEMS, INC.
    Inventors: Bryan P. Staker, Niandong Liu, Bart Lee Staker, Michael David McLaughlin
  • Publication number: 20220214335
    Abstract: Methods are provided for detecting a single compound analyte immobilized to a solid substrate by serially contacting and removing different probes to the same analyte.
    Type: Application
    Filed: February 9, 2022
    Publication date: July 7, 2022
    Inventors: Bryan P. STAKER, Niandong LIU, Bart Lee STAKER, Michael David MCLAUGHLIN
  • Publication number: 20220206006
    Abstract: Electrical detection methods are used to identify and further characterize single-molecule target analytes such as proteins and nucleic acids. A composition including a probe region and a tail region is contacted with a target analyte. The probe region specifically binds to the target analyte. The tail region is coupled to the probe region, and includes a nucleic acid template for polynucleotide synthesis. When conditions are such that polynucleotide synthesis occurs along the tail region, one hydrogen ion is released for every nucleotide that is incorporated into the tail region. A transistor such as an ISFET detects and measures changes in ion concentration, and these measurements can be used to identify the tail region and thus characterize the corresponding target analyte.
    Type: Application
    Filed: March 16, 2022
    Publication date: June 30, 2022
    Inventors: Bryan P. STAKER, Niandong LIU, Bart Lee STAKER, Michael David MCLAUGHLIN
  • Patent number: 11248266
    Abstract: Disclosed herein are methods and systems for detection and discrimination of optical signals from a densely packed substrate. These have broad applications for biomolecule detection near or below the diffraction limit of optical systems, including in improving the efficiency and accuracy of polynucleotide sequencing applications.
    Type: Grant
    Filed: October 1, 2020
    Date of Patent: February 15, 2022
    Assignee: APTON BIOSYSTEMS, INC.
    Inventors: Bryan P. Staker, Niandong Liu, Michael David McLaughlin, Bart Lee Staker
  • Publication number: 20210325397
    Abstract: Electrical detection methods are used to identify and further characterize single-molecule target analytes such as proteins and nucleic acids. A composition including a probe region and a tail region is contacted with a target analyte. The probe region specifically binds to the target analyte. The tail region is coupled to the probe region, and includes a nucleic acid template for polynucleotide synthesis. When conditions are such that polynucleotide synthesis occurs along the tail region, one hydrogen ion is released for every nucleotide that is incorporated into the tail region. A transistor such as an ISFET detects and measures changes in ion concentration, and these measurements can be used to identify the tail region and thus characterize the corresponding target analyte.
    Type: Application
    Filed: February 17, 2021
    Publication date: October 21, 2021
    Inventors: Bryan P. STAKER, Niandong LIU, Bart Lee STAKER, Michael David MCLAUGHLIN
  • Publication number: 20210087626
    Abstract: Disclosed herein are methods and systems for detection and discrimination of optical signals from a densely packed substrate. These have broad applications for biomolecule detection near or below the diffraction limit of optical systems, including in improving the efficiency and accuracy of polynucleotide sequencing applications.
    Type: Application
    Filed: October 1, 2020
    Publication date: March 25, 2021
    Inventors: Bryan J. STAKER, Niandong LIU, Michael David MCLAUGHLIN, Bart Lee STAKER
  • Publication number: 20210072233
    Abstract: Methods and systems are provided for small molecule analyte detection using digital signals, key encryption, and communications protocols. The methods provide detection of a large numbers of proteins, peptides, RNA molecules, and DNA molecules in a single optical or electrical detection assay within a large dynamic range.
    Type: Application
    Filed: December 26, 2019
    Publication date: March 11, 2021
    Inventors: Bryan P. STAKER, Niandong LIU, Bart Lee STAKER, Michael David MCLAUGHLIN
  • Patent number: 10829816
    Abstract: Disclosed herein are methods and systems for detection and discrimination of optical signals from a densely packed substrate. These have broad applications for biomolecule detection near or below the diffraction limit of optical systems, including in improving the efficiency and accuracy of polynucleotide sequencing applications.
    Type: Grant
    Filed: September 16, 2019
    Date of Patent: November 10, 2020
    Assignee: APTON BIOSYSTEMS, INC.
    Inventors: Bryan P. Staker, Niandong Liu, Michael David McLaughlin, Bart Lee Staker
  • Publication number: 20150330974
    Abstract: Methods and systems are provided for small molecule analyte detection using digital signals, key encryption, and communications protocols. The methods provide detection of a large numbers of proteins, peptides, RNA molecules, and DNA molecules in a single optical or electrical detection assay within a large dynamic range.
    Type: Application
    Filed: November 19, 2013
    Publication date: November 19, 2015
    Inventors: Bryan P. Staker, Niandong Liu, Bart Lee Staker, Michael David McLaughlin
  • Publication number: 20040209344
    Abstract: The invention relates to molecules or molecular complexes which comprise binding pockets of angiotensin-converting enzyme-related carboxypeptidase or its homologues. The invention relates to a computer comprising a data storage medium encoded with the structure coordinates of such binding pockets. The invention also relates to methods of using the structure coordinates to solve the structure of homologous proteins or protein complexes. The invention relates to methods of using the structure coordinates to screen for and design compounds that bind to angiotensin-converting enzyme-related carboxypeptidase protein or homologues thereof. The invention also relates to crystallizable compositions and crystals comprising angiotensin-converting enzyme-related carboxypeptidase protein or angiotensin-converting enzyme-related carboxypeptidase protein complexes.
    Type: Application
    Filed: September 9, 2003
    Publication date: October 21, 2004
    Inventors: Michael W. Pantoliano, M. Dominic Ryan, Bart Lee Staker, G. Sridhar Prasad, Jin Tang, Saurabh Prabhakar Menon, Paul S. Towler, David H. Williams, Martin Fisher