Patents by Inventor Benjamin G. Davis

Benjamin G. Davis has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20240180580
    Abstract: Systems, devices, and methods are operable to track usage of a surgical instrument and modify the performance of the surgical instrument based on the prior usage of the surgical instrument. Some surgical instruments are designed to have a limited service life beginning at their first use, or a limit to their overall usage in order to ensure safe use of the sensitive instruments. However, a lack of ability to track usage characteristics when the instrument is separated from an external power supply allows for user abuse and avoidance of such safety mechanisms. Adding a battery or capacitor to the instrument may allow for an ability to track usage when the instrument is separated from an external power supply. Implementing special user prompts, device use ratios, and device use half-life upon powering down of an instrument may additionally be used to prevent circumvention of safety features.
    Type: Application
    Filed: January 2, 2024
    Publication date: June 6, 2024
    Inventors: Craig N. Faller, Benjamin D. Dickerson, Jeffrey L. Aldridge, Jeffrey A. Bullock, Richard W. Timm, Ryan M. Asher, Timothy S. Holland, Craig T. Davis, Christina M. Hough, Cory G. Kimball, Ashvani K. Madan, David C. Yates, Shan Wan, Jacob S. Gee, Joseph E. Hollo, Chad P. Boudreaux, John B. Schulte, Tylor C. Muhlenkamp, Brian D. Black
  • Publication number: 20230272002
    Abstract: The present invention relates to the photoredox-mediated functionalization of proteins with chemical groups via radical generated C—C bond formation, by using specific boronate and sulfone precursor compounds. The present invention also relates to functionalized proteins that can be generated via this method and to the specific boronate and sulfone precursor compounds themselves.
    Type: Application
    Filed: July 15, 2021
    Publication date: August 31, 2023
    Inventors: Patrick G. Isenegger, Benjamin G. Davis, Brian Josephson, Veronique Gouverneur, Charlie Fehl, Adeline W J Poh, Andrew M. Giltrap, Simon Nadal, Yibo Zeng, Jeroen Sap, Oluwatobi Arisa
  • Patent number: 11559581
    Abstract: Described herein are antibody conjugates and methods of making antibody conjugates.
    Type: Grant
    Filed: January 8, 2016
    Date of Patent: January 24, 2023
    Assignee: OXFORD UNIVERSITY INNOVATION LIMITED
    Inventors: Benjamin G. Davis, Keisuke Yamamoto, Thomas Taylor, Thomas B. Parsons, Jonathan Goodfellow
  • Publication number: 20220025419
    Abstract: A process for the production of a glycoconjugate by N-glycosylation of a protein or peptide comprising the sequence D/E-X-N-X-S/T (SEQ ID NO:1), wherein each X is the same or different and is any natural amino acid other than proline, wherein the process comprises reacting the protein or peptide with a polyisoprenyl pyrophosphate of formula (I), or a salt thereof, in the presence of PglB: to produce the glycoconjugate comprising the protein or peptide having a saccharide [S1] linked to the asparagine in the sequence D/E-X-N-X-S/T (SEQ ID NO:1). Polyisoprenylpyrophosphates used as substrates in the biocatalytic process are also provided, as well as certain glycoconjugates.
    Type: Application
    Filed: March 2, 2021
    Publication date: January 27, 2022
    Inventors: Benjamin G. DAVIS, Balakumar VIJAYAKRISHNAN, Feng LIU, Michael WACKER, Amirreza FARIDMOAYER, Michael Thomas KOWARIK
  • Patent number: 9963518
    Abstract: Compounds which inhibit Wza-mcdiated polysaccharide transport are useful in the prevention or treatment of bacterial infection, in particular of E. coli infection. The compounds are typically cyclic oligosaccharides such as cyclodextrins, which bear positively charged functional groups at the primary carbon position.
    Type: Grant
    Filed: August 20, 2012
    Date of Patent: May 8, 2018
    Assignee: Oxford University Innovation Limited
    Inventors: Lingbing Kong, Benjamin G. Davis, Hagan Bayley
  • Publication number: 20160361436
    Abstract: Described herein are antibody conjugates and methods of making antibody conjugates.
    Type: Application
    Filed: January 8, 2016
    Publication date: December 15, 2016
    Inventors: Benjamin G. Davis, Keisuke Yamamoto, Thomas Taylor, Thomas B. Parsons, Jonathan Goodfellow
  • Publication number: 20160257983
    Abstract: A process for the production of a glycoconjugate by N-glycosylation of a protein or peptide comprising the sequence D/E-X—N—X—S/T, wherein each X is the same or different and is any natural amino acid other than proline, wherein the process comprises reacting the protein or peptide with a polyisoprenyl pyrophosphate of formula (I), or a salt thereof, in the presence of PglB: (I) to produce the glycoconjugate comprising the protein or peptide having a saccharide [SI] linked to the asparagine in the sequence D/E-X—N—X—S/T. Polyisoprenylpyrophosphates used as substrates in the biocatalytic process are also provided, as well as certain glycoconjugates.
    Type: Application
    Filed: October 15, 2014
    Publication date: September 8, 2016
    Applicant: ISIS INNOVATION LIMITED
    Inventors: Benjamin G. DAVIS, Balakumar VIJAYAKRISHNAN, Feng LUI, Michael WACKER, Amirreza FARIDMOAYER, Michael Thomas KOWARIK
  • Patent number: 9023763
    Abstract: Compounds which are trehalose-6-phosphate or trehalose-6-phosphonate precursors of formula (I) or agriculturally acceptable salts thereof are provided: (I) The compounds are useful in increasing starch production in plants.
    Type: Grant
    Filed: April 23, 2012
    Date of Patent: May 5, 2015
    Assignee: Isis Innovation Limited
    Inventors: Ram Sagar, Lucia F. Primavesi, Matthew J. Paul, Benjamin G. Davis
  • Publication number: 20140296180
    Abstract: Compounds which inhibit Wza-mcdiated polysaccharide transport are useful in the prevention or treatment of bacterial infection, in particular of E. coli infection. The compounds are typically cyclic oligosaccharides such as cyclodextrins, which bear positively charged functional groups at the primary carbon position.
    Type: Application
    Filed: August 20, 2012
    Publication date: October 2, 2014
    Applicant: ISIS INNOVATION LIMITED
    Inventors: Lingbing Kong, Benjamin G. Davis, Hagan Bayley
  • Publication number: 20140113820
    Abstract: Compounds which are trehalose-6-phosphate or trehalose-6-phosphonate precursors of formula (I) or agriculturally acceptable salts thereof are provided: (I) The compounds are useful in increasing starch production in plants.
    Type: Application
    Filed: April 23, 2012
    Publication date: April 24, 2014
    Applicant: ISIS INNOVATION LIMITED
    Inventors: Ram Sagar, Lucia F. Primavesi, Matthew J. Paul, Benjamin G. Davis
  • Patent number: 8431121
    Abstract: This invention provides chimeric molecules that are catalytic antagonists of a target molecule. The catalytic antagonists of this invention preferably comprise a targeting moiety attached to an enzyme that degrades the molecule specifically bound by the targeting moiety. The catalytic antagonists of this invention thus bind to a target recognized by the targeting moiety (e.g., a receptor) the enzyme component of the chimera then degrades all or part of the target. This typically results in a reduction or loss of activity of the target and release of the chimeric molecule. The chimeric molecule is then free to attack and degrade another target molecule.
    Type: Grant
    Filed: November 23, 2010
    Date of Patent: April 30, 2013
    Assignees: Danisco US Inc., Governing Council of the University of Toronto
    Inventors: Benjamin G. Davis, John Bryan Jones, Richard R. Bott, Karl John Sanford, David Aaron Estell
  • Publication number: 20110262419
    Abstract: This invention provides chimeric molecules that are catalytic antagonists of a target molecule. The catalytic antagonists of this invention preferably comprise a targeting moiety attached to an enzyme that degrades the molecule specifically bound by the targeting moiety. The catalytic antagonists of this invention thus bind to a target recognized by the targeting moiety (e.g., a receptor) the enzyme component of the chimera then degrades all or part of the target. This typically results in a reduction or loss of activity of the target and release of the chimeric molecule. The chimeric molecule is then free to attack and degrade another target molecule.
    Type: Application
    Filed: November 23, 2010
    Publication date: October 27, 2011
    Applicant: DANISCO US, INC.
    Inventors: Benjamin G. Davis, John Bryan Jones, Richard R. Bott, Karl John Stanford, David Aaron Estell
  • Patent number: 7572604
    Abstract: A modified polypeptide having carbohydrate processing enzymatic activity is provided, said polypeptide comprising an amino acid sequence selected from: (a) the amino acid sequence of SEQ ID NO:2 comprising a mutation in at least one of W433, E432 and M439; (b) the amino acid sequence of an enzyme of glycosyl hydrolase family 1, comprising at least one mutation at an amino acid residue equivalent to W433, E432 or M439 of SEQ ID NO:2; and (c) a variant of (a) or (b) having carbohydrate processing enzymatic activity and comprising at least one amino acid mutation at a position equivalent to W433, E432 or M439 of SEQ ID NO:2.
    Type: Grant
    Filed: October 7, 2003
    Date of Patent: August 11, 2009
    Assignee: Isis Innovation Limited
    Inventor: Benjamin G. Davis
  • Publication number: 20090181444
    Abstract: A modified polypeptide having carbohydrate processing enzymatic activity is provided, said polypeptide comprising an amino acid sequence selected from: (a) the amino acid sequence of SEQ ID NO:2 comprising a mutation in at least one of W433, E432 and M439; (b) the amino acid sequence of an enzyme of glycosyl hydrolase family 1, comprising at least one mutation at an amino acid residue equivalent to W433, E432 or M439 of SEQ ID NO:2; and (c) a variant of (a) or (b) having carbohydrate processing enzymatic activity and comprising at least one amino acid mutation at a position equivalent to W433, E432 or M439 of SEQ ID NO:2.
    Type: Application
    Filed: October 7, 2003
    Publication date: July 16, 2009
    Inventor: Benjamin G. Davis
  • Publication number: 20080193389
    Abstract: The present invention is directed to glyodendrimeric proteases, composition with glycodendrimeric proteases and methods for inhibiting adhesion binding in microorganisms by contacting microorganisms with a glycodendrimeric protease or a composition with a glycodendrimeric protease. The invention may be used to treat patients in need of treatment.
    Type: Application
    Filed: October 20, 2006
    Publication date: August 14, 2008
    Inventors: Richard R. Bott, M. M. Cowan, Benjamin G. Davis, John Bryan Jones
  • Patent number: 7371553
    Abstract: This invention provides modified enzymes comprising one or more amino acid residues replaced by cysteine residues, where the cysteine residues are modified by replacing the thiol hydrogen in the cysteine residues with a substituent group providing a thiol side chain comprising a multiply charged moiety. The enzymes show improved interaction and/or specificity and/or activity with charged substrates.
    Type: Grant
    Filed: November 19, 2004
    Date of Patent: May 13, 2008
    Assignees: Genencor International, Inc., The Governing Council of the University of Toronto
    Inventors: Benjamin G. Davis, John Bryan Jones, Richard R. Bott
  • Patent number: 6930180
    Abstract: The present invention relates to a chemically modified mutant protein including a cysteine residue substituted for a residue other than cysteine in a precursor protein, the substituted cysteine residue being subsequently modified by reacting the cysteine residue with a glycosylated thiosulfonate. Also, a method of producing the chemically modified mutant protein is provided. The present invention also relates to a glycosylated methanethiosulfonate. Another aspect of the present invention is a method of modifying the functional characteristics of a protein including providing a protein and reacting the protein with a glycosylated methanethiosulfonate reagent under conditions effective to produce a glycoprotein with altered functional characteristics as compared to the protein. In addition, the present invention relates to methods of determining the structure-function relationships of chemically modified mutant proteins.
    Type: Grant
    Filed: February 1, 2002
    Date of Patent: August 16, 2005
    Assignee: Genencor International, Inc.
    Inventors: J. Bryan Jones, Benjamin G. Davis
  • Publication number: 20040170618
    Abstract: This invention provides chimeric molecules that are catalytic antagonists of a target molecule. The catalytic antagonists of this invention preferably comprise a targeting moiety attached to an enzyme that degrades the molecule specifically bound by the targeting moiety. The catalytic antagonists of this invention thus bind to a target recognized by the targeting moiety (e.g., a receptor) the enzyme component of the chimera then degrades all or part of the target. This typically results in a reduction or loss of activity of the target and release of the chimeric molecule. The chimeric molecule is then free to attack and degrade another target molecule.
    Type: Application
    Filed: March 1, 2004
    Publication date: September 2, 2004
    Inventors: Benjamin G. Davis, John Bryan Jones, Richard R. Bott, Karl John Sanford, David Aaron Estell
  • Publication number: 20040097720
    Abstract: The present invention is directed to glyodendrimeric proteases, composition with glycodendrimeric proteases and methods for inhibiting adhesion binding in microorganisms by contacting microorganisms with a glycodendrimeric protease or a composition with a glycodendrimeric protease. The invention may be used to treat patients in need of treatment.
    Type: Application
    Filed: April 16, 2003
    Publication date: May 20, 2004
    Inventors: Richard R. Bott, M. M. Cowan, Benjamin G. Davis, John Bryan Jones
  • Patent number: 6627744
    Abstract: The present invention relates to a chemically modified mutant protein including a cysteine residue substituted for a residue other than cysteine n a precursor protein, the substituted cysteine residue being subsequently modified by reacting the cysteine residue with a glycosylated thiosulfonate. Also a method of producing the chemically modified mutant protein is provided. The present invention also relates to a glycosylated methanethiosulfonate. Another aspect of the present invention is a method of modifying the functional characteristics of a protein including providing a protein and reacting the protein with a glycosylated methanethiosulfonate reagent under conditions effective to produce a glycoprotein with altered functional characteristics as compared to the protein. In addition, the present invention relates to methods of determining the structure-function relationships of chemically modified mutant proteins.
    Type: Grant
    Filed: April 2, 2001
    Date of Patent: September 30, 2003
    Assignee: Genencor International, Inc.
    Inventors: Benjamin G. Davis, John Bryan Jones, Richard R. Bott