Patents by Inventor C. Satishchandran

C. Satishchandran has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20110223634
    Abstract: The invention features methods of analyzing the kinetics properties of transfection reactions. Also featured are methods for creating structural promoters which are effectively unregulated by enhancers and repressors. The structural promoters are significantly more active than the native promoter sequences upon which they are based.
    Type: Application
    Filed: February 8, 2011
    Publication date: September 15, 2011
    Applicant: ALNYLAM PHARMACEUTICALS, INC.
    Inventors: Catherine J. Pachuk, C. Satishchandran
  • Publication number: 20090258930
    Abstract: The present invention relates to novel double stranded RNA (dsRNA) structures and dsRNA expression constructs, methods for generating them, and methods of utilizing them for silencing genes. Desirably, these methods specifically inhibit the expression of one or more target genes in a cell or animal (e.g., a mammal such as a human) without inducing toxicity. These methods can be used to prevent or treat a disease or infection by silencing a gene associated with the disease or infection. The invention also provides methods for identifying nucleic acid sequences that modulate a detectable phenotype, such as the function of a cell, the expression of a gene, or the biological activity of a target polypeptide.
    Type: Application
    Filed: October 6, 2008
    Publication date: October 15, 2009
    Inventors: Catherine J. PACHUK, C. Satishchandran, Maninder Chopra, David Shuey
  • Publication number: 20090176727
    Abstract: The present invention relates to novel double-stranded RNA (dsRNA) structures and dsRNA expression constructs, methods for generating them, and methods of utilizing them for silencing genes. Desirably, these methods specifically inhibit the expression of one or more target genes in a cell or animal (e.g., a mammal such as a human) without inducing toxicity. These methods can be used to prevent or treat a disease or infection by silencing a gene associated with the disease or infection. The invention also provides methods for identifying nucleic acid sequences that modulate a detectable phenotype, such as the function of a cell, the expression of a gene, or the biological activity of a target polypeptide.
    Type: Application
    Filed: October 8, 2008
    Publication date: July 9, 2009
    Inventors: Catherine J. PACHUK, C. Satishchandran, Daniel Edward McCallus
  • Publication number: 20090163436
    Abstract: This invention features methods and compositions for delivery of nucleic acids (e.g., DNA, RNA, PNA, and hybrids thereof) to cells. The nucleic acid delivery complexes of the invention permit biologically active nucleic acids to be delivered to cells and organisms in vitro and in vivo in a manner and form that allows the nucleic acids to carry out their desired biological function.
    Type: Application
    Filed: August 25, 2008
    Publication date: June 25, 2009
    Inventor: C. Satishchandran
  • Publication number: 20090081654
    Abstract: The invention features methods of analyzing the kinetics properties of transfection reactions. Also featured are methods for creating structural promoters which are effectively unregulated by enhancers and repressors. The structural promoters are significantly more active than the native promoter sequences upon which they are based.
    Type: Application
    Filed: February 20, 2008
    Publication date: March 26, 2009
    Inventors: Catherine J. Pachuk, C. Satishchandran
  • Publication number: 20060084617
    Abstract: This invention features methods and compositions for delivery of nucleic acids (e.g., DNA, RNA, PNA, and hybrids thereof) to cells. The nucleic acid delivery complexes of the invention permit biologically active nucleic acids to be delivered to cells and organisms in vitro and in vivo in a manner and form that allows the nucleic acids to carry out their desired biological function.
    Type: Application
    Filed: May 6, 2003
    Publication date: April 20, 2006
    Inventor: C. Satishchandran
  • Publication number: 20060035344
    Abstract: The present invention relates to novel double-stranded RNA (dsRNA) structures and dsRNA expression constructs, methods for generating them, and methods of utilizing them for silencing genes. Desirably, these methods specifically inhibit the expression of one or more target genes in a cell of animal (e.g., a mammal such as a human) without inducing toxicity. These methods can be used to prevent or treat a disease or infection by silencing a gene associated with the disease or infection. The invention also provides method for identifying nucleic acid sequences that modulate a detectable phenotype, such as the function of a cell, the expression of a gene, or the biological activity of a target polypeptide.
    Type: Application
    Filed: October 20, 2003
    Publication date: February 16, 2006
    Inventors: Catherine Pachuk, C. Satishchandran, Daniel McCallus
  • Publication number: 20050239728
    Abstract: The present invention relates to novel double stranded RNA (dsRNA) structures and dsRNA expression constructs, methods for generating them, and methods of utilizing them for silencing genes. Desirably, these methods specifically inhibit the expression of one or more target genes in a cell or animal (e.g., a mammal such as a human) without inducing toxicity. These methods can be used to prevent or treat a disease or infection by silencing a gene associated with the disease or infection. The invention also provides methods for identifying nucleic acid sequences that modulate a detectable phenotype, such as the function of a cell, the expression of a gene, or the biological activity of a target polypeptide.
    Type: Application
    Filed: July 31, 2003
    Publication date: October 27, 2005
    Inventors: Catherine Pachuk, C. Satishchandran, Maninder Chopra
  • Publication number: 20050039224
    Abstract: The invention features methods of analyzing the kinetics properties of transfection reactions. Also featured are methods for creating structural promoters which are effectively unregulated by enhancers and repressors. The structural promoters are significantly more active than the native promoter sequences upon which they are based.
    Type: Application
    Filed: April 22, 2004
    Publication date: February 17, 2005
    Inventors: Catherine Pachuk, C. Satishchandran
  • Publication number: 20040152117
    Abstract: Described herein are methods for idenfifying nucleic acid sequences that modulate the function of a cell, the expression of a gene in a cell, or the biological activity of a target polypeptide in a cell. The methods involve the use of double stranded RNA expression libraries, double stranded RNA molecules, and post-transcriptional gene silencing techniques.
    Type: Application
    Filed: January 22, 2004
    Publication date: August 5, 2004
    Inventors: Tony Giordano, Catherine J. Pachuk, C. Satishchandran
  • Publication number: 20020132257
    Abstract: Described herein are methods for identifying nucleic acid sequences that modulate the function of a cell, the expression of a gene in a cell, or the biological activity of a target polypeptide in a cell. The methods involve the use of double stranded RNA expression libraries, double stranded RNA molecules, and post-transcriptional gene silencing techniques.
    Type: Application
    Filed: January 31, 2002
    Publication date: September 19, 2002
    Inventors: Tony Giordano, Catherine J. Pachuk, C. Satishchandran
  • Patent number: 6383512
    Abstract: Composition comprising lamellar vesicles that comprise a local anesthetic and a nucleic acid molecule are disclosed. Methods of making such compositions are disclosed. Method of delivering proteins to cells of individuals are disclosed. Methods of inducing immune responses in individuals are disclosed. Methods of delivering nucleic acid molecules to cells of individuals are disclosed.
    Type: Grant
    Filed: April 4, 2000
    Date of Patent: May 7, 2002
    Assignee: American Home Products Corporation
    Inventors: Richard B. Ciccarelli, C. Satishchandran, Catherine J. Pachuk
  • Patent number: 6217900
    Abstract: Composition comprising lamellar vesicles that comprise a local anesthetic and a nucleic acid molecule are disclosed. Methods of making such compositions are disclosed. Method of delivering proteins to cells of individuals are disclosed. Methods of inducing immune responses in individuals are disclosed. Methods of delivering nucleic acid molecules to cells of individuals are disclosed.
    Type: Grant
    Filed: October 5, 1999
    Date of Patent: April 17, 2001
    Assignee: American Home Products Corporation
    Inventors: Richard B. Ciccarelli, C. Satishchandran, Catherine J. Pachuk
  • Patent number: 6168918
    Abstract: Methods of detecting the presence of a plasmid DNA sequence integrated in a chromosomal DNA molecule of a eukaryotic cell in a sample that contains chromosomal DNA molecules of eukaryotic cells and free plasmid DNA molecules are disclosed. According to the invention, chromosomal DNA of eukaryotic cells which are free of deoxyadenosine methyltransferase, and free plasmid DNA molecules which are produced in cells that contain deoxyadenosine methyltransferase and which have a DpnI site, are digested with one or more restriction enzymes that cleave plasmid DNA sequences integrated in the chromosomal DNA and plasmid DNA molecules to produce DNA digestion segments that are then fractionated to produce a plurality of fractions. The DNA digestion segments in each fraction is digested with DpnI and plasmid DNA sequences are amplified using sets of primers that flank a DpnI site in the plasmid DNA sequence.
    Type: Grant
    Filed: January 31, 1996
    Date of Patent: January 2, 2001
    Assignee: American Home Products Corp.
    Inventors: C. Satishchandran, Richard Benjamin Ciccarelli, Catherine Julia Pachuk
  • Patent number: 6143527
    Abstract: Chain reaction cloning methods and reagents and kits for performing such methods are provided. Chain reaction cloning allows ligation of double-stranded DNA molecules by DNA ligases and bridging oligonucleotides. Double-stranded nucleic acid molecules are denatured into single-stranded molecules. The ends of the molecules are brought together by hybridization to a template. The template ensures that the two single-stranded nucleic acid molecules are aligned correctly. DNA ligase joins the two nucleic acid molecules into a single, larger, composite nucleic acid molecule. The nucleic acid molecules are subsequently denatured so that the composite molecule formed by the ligated nucleic acid molecules and the template cease to hybridize to each. Each composite molecule then serves as a template for orienting unligated, single-stranded nucleic acid molecules. After several cycles, composite nucleic acid molecules are generated from smaller nucleic acid molecules.
    Type: Grant
    Filed: May 6, 1997
    Date of Patent: November 7, 2000
    Assignee: American Home Products Corporation
    Inventors: Catherine J. Pachuk, Manoj Samuel, C. Satishchandran
  • Patent number: 6083692
    Abstract: Methods of detecting the presence of linear DNA in a sample that contains circular DNA are disclosed. The methods comprise combining an ATP-dependent deoxyribonuclease, ATP and a sample to form a reaction mixture, maintaining the reaction mixture under conditions in which linear DNA is processed by the ATP-dependent deoxyribonuclease, and detecting the presence of ADP thus produced. Methods of detecting the presence of DNA, RNA, or protein in samples are disclosed. The methods comprise combining an ATP-dependent deoxyribonuclease, an ATP-dependent ribonuclease, or an ATP-dependent protease, respectively, with ATP and a sample to form a reaction mixture. The reaction mixture is maintained under conditions in which DNA, RNA or protein is processed by the respective ATP-dependent enzyme. The presence of ADP thus produced is detected, indicating the presence of the enzyme substrate. Methods of quantifying the DNA molecules, RNA molecules or protein molecules are also disclosed.
    Type: Grant
    Filed: June 3, 1996
    Date of Patent: July 4, 2000
    Assignee: American Home Products Corporation
    Inventors: C. Satishchandran, Manoj Samuel
  • Patent number: 5851804
    Abstract: Chimeric kanamycin resistance genes are disclosed. The chimeric genes comprise a nucleotide sequence that encodes ANT(4')-IA enzyme operably linked to a heterologous promoter and a heterologous termination sequence. Plasmids that comprise the chimeric kanamycin resistance gene are disclosed. Bacterial cells that comprise the chimeric gene on a plasmid or integrated into the bacterial genome are disclosed. Methods of producing plasmids are disclosed. Pharmaceutical compositions comprising plasmids that include the chimeric genes are disclosed. Methods of enhancing growth of a bacterial cells are disclosed. Plasmid which comprise the chimeric kanamycin resistance gene and the sequences from herpes simplex virus gene HSVgD.sub.2 or human immunodeficiency virus are disclosed.
    Type: Grant
    Filed: May 6, 1996
    Date of Patent: December 22, 1998
    Assignee: Apollon, Inc.
    Inventors: Linda Anne Snyder, C. Satishchandran