Patents by Inventor Duhee Bang

Duhee Bang has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 10526640
    Abstract: A method for retrieving nucleic acid fragments, including: providing reduced DNA libraries during sequencing; amplifying nucleic acid fragments from the reduced DNA libraries; and retrieving the amplified nucleic acid fragments. The method further includes acquiring desired nucleic acid fragments among the retrieved nucleic acid fragments. The desired nucleic acid fragments are acquired using sequences having a homology to the barcode sequences, when the amplified nucleic acid fragments are tagged with specific barcode sequences.
    Type: Grant
    Filed: December 21, 2015
    Date of Patent: January 7, 2020
    Assignee: INDUSTRY-ACADEMIC COOPERATION FOUNDATION, YONSEI UNIVERSITY
    Inventors: Duhee Bang, Hwangbeom Kim, Namjin Cho, Hyeonseob Lim, Sangun Park, Hyojun Han
  • Patent number: 10358642
    Abstract: Disclosed is a method of preparing nucleic acid molecules, including: providing a pool of oligonucleotides, each containing restriction enzyme digestion sequences and generic flanking sequences; cleaving the restriction enzyme digestion sequence portions to provide a pool of mixtures comprising the oligonucleotides, each containing the generic flanking sequences at one end, and the oligonucleotides, each containing none of the generic flanking sequences at one end, and; assembling the oligonucleotides using the generic flanking sequences to randomly synthesize nucleic acid fragments.
    Type: Grant
    Filed: April 19, 2016
    Date of Patent: July 23, 2019
    Assignee: CELEMICS, INC.
    Inventors: Duhee Bang, Hwangbeom Kim, Hyojun Han
  • Patent number: 10087484
    Abstract: Provided is a method for stably synthesizing an error-free gene using a high-depth oligonucleotide tiling, which includes designing an oligonucleotide fragment by an over-overlapping method, synthesizing the oligonucleotide fragment using DNA microarray, retrieving error-free oligonucleotide fragments retrieved by next generation sequencing, and assembling the error-free oligonucleotide fragments.
    Type: Grant
    Filed: June 16, 2016
    Date of Patent: October 2, 2018
    Assignee: UNIVERSITY-INDUSTRY FOUNDATION, YONSEI UNIVERSITY
    Inventors: Duhee Bang, Nam Jin Cho, Han Na Seo, Eui Jin Kwon
  • Patent number: 10036007
    Abstract: Proposed is a method of easily finding an error during analysis of various library sequences of nucleic acid base sequences after synthesizing a gene library using a combination of three nucleic acid base sequences (codon) translated into the same protein. This shows that it is possible to create a gene library having the same protein sequence but different nucleic acid base sequences. The present disclosure provides a novel experimental method capable of measuring a correlation between gene expression according to change in a codon by changing the usage of a codon optimized to express a specific gene in vivo.
    Type: Grant
    Filed: December 11, 2013
    Date of Patent: July 31, 2018
    Assignee: CELEMICS, INC.
    Inventors: Duhee Bang, Sangun Park, Joongoo Lee, Jeewon Lee
  • Publication number: 20160369335
    Abstract: Provided is a method for stably synthesizing an error-free gene using a high-depth oligonucleotide tiling, which includes designing an oligonucleotide fragment by an over-overlapping method, synthesizing the oligonucleotide fragment using DNA microarray, retrieving error-free oligonucleotide fragments retrieved by next generation sequencing, and assembling the error-free oligonucleotide fragments.
    Type: Application
    Filed: June 16, 2016
    Publication date: December 22, 2016
    Inventors: Duhee BANG, Nam Jin CHO, Han Na SEO, Eui Jin KWON
  • Publication number: 20160244829
    Abstract: The present invention relates to a method of capturing a target nucleic acid sequence in genome sequencing, e using a CRISPR system. According to the present invention, the use of a plurality of CRIPSR systems enables capturing a plurality of target nucleic acids within genome simultaneously.
    Type: Application
    Filed: February 25, 2016
    Publication date: August 25, 2016
    Inventors: Duhee BANG, Ji Won LEE, Hyeon Seob LIM
  • Publication number: 20160222380
    Abstract: Disclosed is a method of preparing nucleic acid molecules, including: providing a pool of oligonucleotides, each containing restriction enzyme digestion sequences and generic flanking sequences; cleaving the restriction enzyme digestion sequence portions to provide a pool of mixtures comprising the oligonucleotides, each containing the generic flanking sequences at one end, and the oligonucleotides, each containing none of the generic flanking sequences at one end, and; assembling the oligonucleotides using the generic flanking sequences to randomly synthesize nucleic acid fragments.
    Type: Application
    Filed: April 19, 2016
    Publication date: August 4, 2016
    Applicant: CELEMICS, INC.
    Inventors: Duhee Bang, Hwangbeom Kim, Hyojun Han
  • Publication number: 20160201052
    Abstract: A method for retrieving nucleic acid fragments, including: providing reduced DNA libraries during sequencing; amplifying nucleic acid fragments from the reduced DNA libraries; and retrieving the amplified nucleic acid fragments. The method further includes acquiring desired nucleic acid fragments among the retrieved nucleic acid fragments. The desired nucleic acid fragments are acquired using sequences having a homology to the barcode sequences, when the amplified nucleic acid fragments are tagged with specific barcode sequences.
    Type: Application
    Filed: December 21, 2015
    Publication date: July 14, 2016
    Applicant: INDUSTRY-ACADEMIC COOPERATION FOUNDATION, YONSEI UNIVERSITY
    Inventors: Duhee Bang, Hwangbeom Kim, Namjin Cho, Hyeonseob Lim, Sangun Park, Hyojun Han
  • Patent number: 9340826
    Abstract: Provided is a method of preparing nucleic acid molecules comprising: (a) a step of providing nucleic acid fragments constituting at least a portion of the complete sequence of a target nucleic acid; (b) tagging the nucleic acid fragments with barcode sequences; (c) identifying the sequence of the nucleic acid fragments tagged by the barcode sequences; and (d) recovering desired nucleic acid fragments among the sequence-identified nucleic acid fragments using the barcode sequences.
    Type: Grant
    Filed: August 1, 2012
    Date of Patent: May 17, 2016
    Assignee: CELEMICS, INC.
    Inventors: Duhee Bang, Hwangbeom Kim, Hyojun Han
  • Publication number: 20150329854
    Abstract: Proposed is a method of easily finding an error during analysis of various library sequences of nucleic acid base sequences after synthesizing a gene library using a combination of three nucleic acid base sequences (codon) translated into the same protein. This shows that it is possible to create a gene library having the same protein sequence but different nucleic acid base sequences. The present disclosure provides a novel experimental method capable of measuring a correlation between gene expression according to change in a codon by changing the usage of a codon optimized to express a specific gene in vivo.
    Type: Application
    Filed: December 11, 2013
    Publication date: November 19, 2015
    Inventors: Duhee BANG, Sangun PARK, Joongoo LEE, Jeewon LEE
  • Publication number: 20150093773
    Abstract: Provided is a method of inserting a target sequence into a genome of a cell through positive selection or negative selection based on whether a marker is expressed.
    Type: Application
    Filed: October 1, 2014
    Publication date: April 2, 2015
    Inventors: Yukyung Jung, Duhee Bang, Jinhwan Park, Hanna Seo, Jaehwan Jung, Kwangmyung Cho
  • Publication number: 20140309118
    Abstract: Provided is a method of preparing nucleic acid molecules comprising: (a) a step of providing nucleic acid fragments constituting at least a portion of the complete sequence of a target nucleic acid; (b) tagging the nucleic acid fragments with barcode sequences; (c) identifying the sequence of the nucleic acid fragments tagged by the barcode sequences; and (d) recovering desired nucleic acid fragments among the sequence-identified nucleic acid fragments using the barcode sequences.
    Type: Application
    Filed: August 1, 2012
    Publication date: October 16, 2014
    Applicant: YONSEI UNIVERSITY R&DB FOUNDATION
    Inventors: Duhee Bang, Hwangbeom Kim, Hyojun Han
  • Publication number: 20110039304
    Abstract: Methods and compositions for generating oligonucleotide pools are provided. Methods and compositions for enriching target nucleic acid sequences are also provided.
    Type: Application
    Filed: August 12, 2010
    Publication date: February 17, 2011
    Applicant: President and Fellows of Harvard College
    Inventors: George M. Church, Duhee Bang, Jin Li
  • Patent number: 7674881
    Abstract: The present invention concerns methods and compositions for synthesizing a polypeptide using kinetically controlled reactions involving fragments of the polypeptide for a fully convergent process. In more specific embodiments, a ligation involves reacting a first peptide having a protected cysteyl group at its N-terminal and a phenylthioester at its C-terminal with a second peptide having a cysteine residue at its N-termini and a thioester at its C-termini to form a ligation product. Subsequent reactions may involve deprotecting the cysteyl group of the resulting ligation product and/or converting the thioester into a thiophenylester.
    Type: Grant
    Filed: October 10, 2006
    Date of Patent: March 9, 2010
    Assignee: The University of Chicago
    Inventors: Stephen Kent, Brad Pentelute, Duhee Bang, Erik Johnson, Thomas Durek
  • Publication number: 20070082378
    Abstract: The present invention concerns methods and compositions for synthesizing a polypeptide using kinetically controlled reactions involving fragments of the polypeptide for a fully convergent process. In more specific embodiments, a ligation involves reacting a first peptide having a protected cysteyl group at its N-terminal and a phenylthioester at its C-terminal with a second peptide having a cysteine residue at its N-termini and a thioester at its C-termini to form a ligation product. Subsequent reactions may involve deprotecting the cysteyl group of the resulting ligation product and/or converting the thioester into a thiophenylester.
    Type: Application
    Filed: October 10, 2006
    Publication date: April 12, 2007
    Applicant: University of Chicago
    Inventors: Stephen Kent, Duhee Bang, Brad Pentelute, Thomas Durek, Erik Johnson