Patents by Inventor Ellen L. Berg

Ellen L. Berg has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 10240255
    Abstract: Methods and systems for evaluating biological dataset profiles relating to toxic agents including candidate pharmaceuticals, environmental agents, biowarfare and chemical warfare agents are provided, where datasets comprising information for multiple cellular parameters are compared and identified, and used in the evaluation of candidate agents.
    Type: Grant
    Filed: April 21, 2014
    Date of Patent: March 26, 2019
    Assignee: EUROFINS DISCOVERX CORPORATION
    Inventor: Ellen L. Berg
  • Patent number: 10018621
    Abstract: A method of screening biologically active agent based on the analysis of complex biological responses in culture. Methods for selecting cells and culture conditions for such screens are provided, as well as the identification of an optimized set of discrete parameters to be measured, and the use of biomap analysis for rapid identification and characterization of drug candidates, genetic sequences acting pathways, and the like. A feature of the invention is simultaneous screening of a large number of cellular pathways, and the rapid identification of compounds that cause cellular responses.
    Type: Grant
    Filed: June 13, 2013
    Date of Patent: July 10, 2018
    Assignee: Eurofins Discoverx Corporation
    Inventors: Ellen L. Berg, Eugene C. Butcher, Jennifer Melrose
  • Publication number: 20140315731
    Abstract: Methods and systems for evaluating biological dataset profiles relating to toxic agents including candidate pharmaceuticals, environmental agents, biowarfare and chemical warfare agents are provided, where datasets comprising information for multiple cellular parameters are compared and identified, and used in the evaluation of candidate agents.
    Type: Application
    Filed: April 21, 2014
    Publication date: October 23, 2014
    Applicant: DISCOVERX CORPORATION
    Inventor: Ellen L. Berg
  • Patent number: 8718945
    Abstract: Methods and systems for evaluating biological dataset profiles relating to toxic agents including candidate pharmaceuticals, environmental agents, biowarfare and chemical warfare agents are provided, where datasets comprising information for multiple cellular parameters are compared and identified, and used in the evaluation of candidate agents.
    Type: Grant
    Filed: March 28, 2008
    Date of Patent: May 6, 2014
    Assignee: DiscoveRx Corporation
    Inventor: Ellen L. Berg
  • Publication number: 20130266967
    Abstract: A method of screening biologically active agent based on the analysis of complex biological responses in culture. Methods for selecting cells and culture conditions for such screens are provided, as well as the identification of an optimized set of discrete parameters to be measured, and the use of biomap analysis for rapid identification and characterization of drug candidates, genetic sequences acting pathways, and the like. A feature of the invention is simultaneous screening of a large number of cellular pathways, and the rapid identification of compounds that cause cellular responses.
    Type: Application
    Filed: June 13, 2013
    Publication date: October 10, 2013
    Inventors: Ellen L. Berg, Eugene C. Butcher, Jennifer Melrose
  • Patent number: 8467970
    Abstract: A method of screening biologically active agent based on the analysis of complex biological responses in culture. Methods for selecting cells and culture conditions for such screens are provided, as well as the identification of an optimized set of discrete parameters to be measured, and the use of biomap analysis for rapid identification and characterization of drug candidates, genetic sequences acting pathways, and the like. A feature of the invention is simultaneous screening of a large number of cellular pathways, and the rapid identification of compounds that cause cellular responses.
    Type: Grant
    Filed: November 17, 2003
    Date of Patent: June 18, 2013
    Assignee: DiscoveRx Corporation
    Inventors: Ellen L. Berg, Eugene C. Butcher, Jennifer Melrose
  • Patent number: 8019551
    Abstract: Methods and systems for evaluating biological dataset profiles relating to asthma and other atopic conditions are provided, where datasets comprising information for multiple cellular parameters are compared and identified, and used in the evaluation of candidate pharmacologic agents for suitability as therapeutic agents.
    Type: Grant
    Filed: February 17, 2005
    Date of Patent: September 13, 2011
    Assignee: Bioseek LLC
    Inventors: Elen S. Rosler, Eric J. Kunkel, Sylvie Privat, Jennifer Melrose, Melissa Fischer, Ellen L. Berg
  • Patent number: 7912651
    Abstract: A method of screening biologically active agent based on the analysis of complex biological responses in culture. Methods for selecting cells and culture conditions for such screens are provided, as well as the identification of an optimized set of discrete parameters to be measured, and the use of biomap analysis for rapid identification and characterization of drug candidates, genetic sequences acting pathways, and the like. A feature of the invention is simultaneous screening of a large number of cellular pathways, and the rapid identification of compounds that cause cellular responses.
    Type: Grant
    Filed: March 6, 2001
    Date of Patent: March 22, 2011
    Assignee: BioSeek LLC
    Inventors: Ellen L. Berg, Eugene C. Butcher, Jennifer Melrose, Ivan Plavec
  • Patent number: 7908089
    Abstract: Clinical patient tissue samples are classified according to the physiological status of cells present in the sample. In some embodiments of the invention, such cells are classified according to their ability to respond to therapeutic agents and treatments. In other embodiments, the cells or tissue samples are classified according to their status with respect to the activity of pathways of interest. The information thus derived is useful in prognosis and diagnosis, and can further be used develop surrogate markers for disease states, and to investigate the effect of genetic polymorphisms in the responsiveness and state of cells involved in disease.
    Type: Grant
    Filed: May 27, 2004
    Date of Patent: March 15, 2011
    Assignee: BioSeek LLC
    Inventors: Ellen L. Berg, Eugene C. Butcher, Jennifer Melrose
  • Publication number: 20100235104
    Abstract: Methods and systems for evaluating biological dataset profiles relating to toxic agents including candidate pharmaceuticals, environmental agents, biowarfare and chemical warfare agents are provided, where datasets comprising information for multiple cellular parameters are compared and identified, and used in the evaluation of candidate agents.
    Type: Application
    Filed: March 28, 2008
    Publication date: September 16, 2010
    Inventor: Ellen L. Berg
  • Patent number: 7266458
    Abstract: The involvement of an expression product in a cell in a pathway is determined by genetically modifying the cell, incubating the cell with predetermined factors in induce a physiological state and measuring parameters affected by the pathway. Changes in the levels of the parameters as a result of the presence of the expressed product indicate that the expression product is involved with the pathway.
    Type: Grant
    Filed: September 5, 2002
    Date of Patent: September 4, 2007
    Assignee: Bioseek, Inc.
    Inventors: Ivan Plavec, Ellen L. Berg, Eugene C. Butcher
  • Publication number: 20040219592
    Abstract: Clinical patient tissue samples are classified according to the physiological status of cells present in the sample. In some embodiments of the invention, such cells are classified according to their ability to respond to therapeutic agents and treatments. In other embodiments, the cells or tissue samples are classified according to their status with respect to the activity of pathways of interest. The information thus derived is useful in prognosis and diagnosis, and can further be used develop surrogate markers for disease states, and to investigate the effect of genetic polymorphisms in the responsiveness and state of cells involved in disease.
    Type: Application
    Filed: May 27, 2004
    Publication date: November 4, 2004
    Applicant: BioSeek, Inc.
    Inventors: Ellen L. Berg, Eugene C. Butcher, Jennifer Melrose
  • Publication number: 20040157269
    Abstract: A method of screening biologically active agent based on the analysis of complex biological responses in culture. Methods for selecting cells and culture conditions for such screens are provided, as well as the identification of an optimized set of discrete parameters to be measured, and the use of biomap analysis for rapid identification and characterization of drug candidates, genetic sequences acting pathways, and the like. A feature of the invention is simultaneous screening of a large number of cellular pathways, and the rapid identification of compounds that cause cellular responses.
    Type: Application
    Filed: November 17, 2003
    Publication date: August 12, 2004
    Inventors: Ellen L. Berg, Eugene C. Butcher, Jennifer Melrose
  • Patent number: 6763307
    Abstract: Clinical patient tissue samples are classified according to the physiological status of cells present in the sample. In some embodiments of the invention, such cells are classified according to their ability to respond to therapeutic agents and treatments. In other embodiments, the cells or tissue samples are classified according to their status with respect to the activity of pathways of interest. The information thus derived is useful in prognosis and diagnosis, and can further be used develop surrogate markers for disease states, and to investigate the effect of genetic polymorphisms in the responsiveness and state of cells involved in disease.
    Type: Grant
    Filed: September 13, 2001
    Date of Patent: July 13, 2004
    Assignee: BioSeek, Inc.
    Inventors: Ellen L. Berg, Eugene C. Butcher, Jennifer Melrose
  • Publication number: 20040063088
    Abstract: A method of screening biologically active agent based on the analysis of complex biological responses in culture. Methods for selecting cells and culture conditions for such screens are provided, as well as the identification of an optimized set of discrete parameters to be measured, and the use of biomap analysis for rapid identification and characterization of drug candidates, genetic sequences acting pathways, and the like. A feature of the invention is simultaneous screening of a large number of cellular pathways, and the rapid identification of compounds that cause cellular responses.
    Type: Application
    Filed: September 11, 2003
    Publication date: April 1, 2004
    Inventors: Ellen L. Berg, Eugene C. Butcher, Jennifer Melrose, Ivan Plavec
  • Patent number: 6656695
    Abstract: A method of screening biologically active agent based on the analysis of complex biological responses in culture. Methods for selecting cells and culture conditions for such screens are provided, as well as the identification of an optimized set of discrete parameters to be measured, and the use of biomap analysis for rapid identification and characterization of drug candidates, genetic sequences acting pathways, and the like. A feature of the invention is simultaneous screening of a large number of cellular pathways, and the rapid identification of compounds that cause cellular responses.
    Type: Grant
    Filed: March 6, 2001
    Date of Patent: December 2, 2003
    Assignee: Bioseek, Inc.
    Inventors: Ellen L. Berg, Eugene C. Butcher, Jennifer Melrose
  • Publication number: 20030138811
    Abstract: The involvement of an expression product in a cell in a pathway is determined by genetically modifying the cell, incubating the cell with predetermined factors in induce a physiological state and measuring parameters affected by the pathway. Changes in the levels of the parameters as a result of the presence of the expressed product indicate that the expression product is involved with the pathway.
    Type: Application
    Filed: September 5, 2002
    Publication date: July 24, 2003
    Inventors: Ivan Plavec, Ellen L. Berg, Eugene C. Butcher
  • Publication number: 20030133937
    Abstract: Methods and compositions are disclosed for the inhibition of cancer metastases mediated by endothelial adhesion molecules. The present invention discloses that sialyl Lea and di-sialyl Lea, which are expressed at the surface of cancer cells, function as a binding partner for LEC-CAMs, such as ELAM-1, which are expressed at the surface of endothelial cells. The present invention also discloses that LEC-CAMs, such as ELAM-1, involved in cancer metastasis share a carbohydrate domain common to both sialyl Lea and sialyl Lex. Antibodies, saccharides, glycoconjugates, enzyme inhibitors and other compounds may be used in the methods of the present invention to inhibit the binding of malignant cells to endothelial cells for a variety of purposes in vivo and in vitro.
    Type: Application
    Filed: October 10, 2002
    Publication date: July 17, 2003
    Applicant: John L. Magnani
    Inventors: John L. Magnani, Eugene C. Butcher, Ellen L. Berg
  • Publication number: 20030113807
    Abstract: A method of screening biologically active agent based on the analysis of complex biological responses in culture. Methods for selecting cells and culture conditions for such screens are provided, as well as the identification of an optimized set of discrete parameters to be measured, and the use of biomap analysis for rapid identification and characterization of drug candidates, genetic sequences acting pathways, and the like. A feature of the invention is simultaneous screening of a large number of cellular pathways, and the rapid identification of compounds that cause cellular responses.
    Type: Application
    Filed: March 6, 2001
    Publication date: June 19, 2003
    Inventors: Ellen L. Berg, Eugene C. Butcher, Jennifer Melrose
  • Publication number: 20030017445
    Abstract: Clinical patient tissue samples are classified according to the physiological status of cells present in the sample. In some embodiments of the invention, such cells are classified according to their ability to respond to therapeutic agents and treatments. In other embodiments, the cells or tissue samples are classified according to their status with respect to the activity of pathways of interest. The information thus derived is useful in prognosis and diagnosis, and can further be used develop surrogate markers for disease states, and to investigate the effect of genetic polymorphisms in the responsiveness and state of cells involved in disease.
    Type: Application
    Filed: September 13, 2001
    Publication date: January 23, 2003
    Inventors: Ellen L. Berg, Eugene C. Butcher, Jennifer Melrose