Patents by Inventor Harri Savilahti

Harri Savilahti has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 9234190
    Abstract: The present invention provides a method for producing a hyperactive MuA transposase variant comprising at least one single-amino-acid change, the method comprising the steps of modifying the nucleic acid encoding wild type MuA transposase in at least one of the positions 59, 97, 160, 179, 233, 254, 258, 302, 335, 340, 345, 374, 447, 464, 478, 482, 483, 487, 495, 507, 539, 594 or 617 so that the modified nucleic acid encodes a MuA transposase variant comprising at least one single-amino-acid change in its amino acid sequence, wherein said single-amino-acid change results in higher enzyme activity of the variant when compared to the wild type MuA transposase. The present invention also provides hyperactive MuA transposases and kits comprising the same.
    Type: Grant
    Filed: May 30, 2013
    Date of Patent: January 12, 2016
    Inventor: Harri Savilahti
  • Publication number: 20150147753
    Abstract: The present invention provides a method for producing a hyperactive MuA transposase variant comprising at least one single-amino-acid change, the method comprising the steps of modifying the nucleic acid encoding wild type MuA transposase in at least one of the positions 59, 97, 160, 179, 233, 254, 258, 302, 335, 340, 345, 374, 447, 464, 478, 482, 483, 487, 495, 507, 539, 594 or 617 so that the modified nucleic acid encodes a MuA transposase variant comprising at least one single-amino-acid change in its amino acid sequence, wherein said single-amino-acid change results in higher enzyme activity of the variant when compared to the wild type MuA transposase. The present invention also provides hyperactive MuA transposases and kits comprising the same.
    Type: Application
    Filed: May 30, 2013
    Publication date: May 28, 2015
    Inventor: Harri SAVILAHTI
  • Patent number: 8192934
    Abstract: The present invention relates to genetic engineering and especially to the use of DNA transposition complex of bacteriophage Mu. In particular, the invention provides a gene transfer system for eukaryotic cells, wherein in vitro assembled Mu transposition complexes are introduced into a target cell and subsequently transposition into a cellular nucleic acid occurs. The invention further provides a kit for producing insertional mutations into the genomes of eukaryotic cells. The kit can be used, e.g., to generate insertional mutant libraries.
    Type: Grant
    Filed: September 9, 2011
    Date of Patent: June 5, 2012
    Assignee: Finnzymes Oy
    Inventors: Harri Savilahti, Mikko Frilander, Xiaojuan Meng, Anja Paatero, Maria Pajunen, Hikka Turakainen
  • Publication number: 20120015831
    Abstract: The present invention relates to genetic engineering and especially to the use of DNA transposition complex of bacteriophage Mu. In particular, the invention provides a gene transfer system for eukaryotic cells, wherein in vitro assembled Mu transposition complexes are introduced into a target cell and subsequently transposition into a cellular nucleic acid occurs. The invention further provides a kit for producing insertional mutations into the genomes of eukaryotic cells. The kit can be used, e.g., to generate insertional mutant libraries.
    Type: Application
    Filed: September 9, 2011
    Publication date: January 19, 2012
    Applicant: Finnzymes Oy
    Inventors: Harri Savilahti, Mikko Frilander, Xiaojuan Meng, Anja Paatero, Maria Pajunen, Hilkka Turakainen
  • Patent number: 8026052
    Abstract: The present invention relates to genetic engineering and especially to the use of DNA transposition complex of bacteriophage Mu. In particular, the invention provides a gene transfer system for eukaryotic cells, wherein in vitro assembled Mu transposition complexes are introduced into a target cell and subsequently transposition into a cellular nucleic acid occurs. The invention further provides a kit for producing insertional mutations into the genomes of eukaryotic cells. The kit can be used, e.g., to generate insertional mutant libraries.
    Type: Grant
    Filed: April 14, 2004
    Date of Patent: September 27, 2011
    Assignee: Finnzymes Oy
    Inventors: Harri Savilahti, Mikko Frilander, Xiaojuan Meng, Anja Paatero, Maria Pajunen, Hilkka Turakainen
  • Publication number: 20100173800
    Abstract: The present invention relates to genetic engineering and especially to the use of DNA transposition complex of bacteriophage Mu. In particular, the invention provides a gene transfer system for isolated human stem cells, wherein in vitro assembled Mu transposition complexes are introduced into a target cell and subsequently transposition into a cellular nucleic acid occurs. The invention further provides a kit for producing insertional mutations into the genomes of isolated human stem cells. The kit can be used, e.g., to generate insertional mutant libraries.
    Type: Application
    Filed: July 4, 2008
    Publication date: July 8, 2010
    Applicant: FINNZYMES OY
    Inventor: Harri Savilahti
  • Patent number: 7172882
    Abstract: The present invention describes an in vitro transposition-based methodology for generation of deletion derivatives of polypeptides. An artificial transposon containing at least partly within its transposon ends a modification with translation stop codons in three reading frames is provided. In the method, transposition complexes are assembled using the modified transposon and essentially random integrations into the target plasmid, containing a polypeptide coding nucleic acid of interest, are recovered as a plasmid pool. Subsequent manipulation steps including restriction enzyme digestions and ligation result in pools of mutant clones from which deletion derivatives of a polypeptide coding nucleic acid of interest and its respective deletion polypeptides could be produced.
    Type: Grant
    Filed: April 14, 2003
    Date of Patent: February 6, 2007
    Assignee: Finnzymes Oy
    Inventors: Harri Savilahti, Ville Tieaho
  • Publication number: 20050208616
    Abstract: The present invention describes an in vitro transposition-based methodology for generation of deletion derivatives of polypeptides. An artificial transposon containing at least partly within its transposon ends a modification with translation stop codons in three reading frames is provided. In the method, transposition complexes are assembled using the modified transposon and essentially random integrations into the target plasmid, containing a polypeptide coding nucleic acid of interest, are recovered as a plasmid pool. Subsequent manipulation steps including restriction enzyme digestions and ligation result in pools of mutant clones from which deletion derivatives of a polypeptide coding nucleic acid of interest and its respective deletion polypeptides could be produced.
    Type: Application
    Filed: April 14, 2003
    Publication date: September 22, 2005
    Inventors: Harri Savilahti, Ville Tieaho
  • Patent number: 6593113
    Abstract: The present invention relates to an in vitro method for providing unique templates for DNA sequencing and to a kit, which can be used, when employing the selection method of this invention. The examined DNA is subjected to a DNA transposition reaction and to an amplification reaction. The amplification reaction is carried out in the presence of a fixed primer and a selective primer having a complementary sequence to the end of a transposon DNA. A transposition reaction can be carried out also in the presence of a transposon or transposons, which have different ends enabling the design of selective primers for both ends. Each size of the amplification products represents one template for a sequencing reaction.
    Type: Grant
    Filed: December 30, 1999
    Date of Patent: July 15, 2003
    Assignee: Finnzymes Oy
    Inventors: Tuomas Tenkanen, Timo Soininen, Harri Savilahti, Kirsi Multanen