Patents by Inventor Ilya Kupershmidt
Ilya Kupershmidt has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).
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Publication number: 20200194121Abstract: A digital health system provides personalized feedback to users using machine learning models. The system receives event data describing physiological events of a user. The system may classify the physiological events and update a temporal model of physiological health of the user using the classified physiological events. The temporal model may map the classified physiological events to a timeline based on timestamps of the events. The temporal model may identify statistical distributions of the physiological events and determine a physiological condition of the user based on the statistical distributions. In some embodiments, the system communicates with a user using a digital health assistant via chatbot interface. The digital health assistant, may be trained using artificial intelligence of the system and simulates interaction with a doctor or health provider.Type: ApplicationFiled: February 7, 2020Publication date: June 18, 2020Inventors: Ilya Kupershmidt, Arielle S. Radin
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Patent number: 10275711Abstract: The present invention relates to methods, systems and apparatus for capturing, integrating, organizing, navigating and querying large-scale data from high-throughput biological and chemical assay platforms. It provides a highly efficient meta-analysis infrastructure for performing research queries across a large number of studies and experiments from different biological and chemical assays, data types and organisms, as well as systems to build and add to such an infrastructure.Type: GrantFiled: August 17, 2012Date of Patent: April 30, 2019Assignee: NextbioInventors: Ilya Kupershmidt, Qiaojuan Jane Su, Francois Andry
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Patent number: 10127353Abstract: According to various embodiments, aspects of the invention provide a highly efficient meta-analysis infrastructure for performing research queries across a large number of studies and experiments from diverse sequencing technologies as well as different biological and chemical assays, data types and organisms, as well as systems to build and add to such an infrastructure. The methods, systems and apparatuses described enable combining orthogonal types of data and available public knowledge to elucidate mechanisms governing normal development, disease progression, as well as susceptibility of individuals to disease or response to drug treatments.Type: GrantFiled: March 6, 2017Date of Patent: November 13, 2018Assignee: NextbioInventors: Ilya Kupershmidt, Qiaojuan Jane Su
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Publication number: 20170177793Abstract: According to various embodiments, aspects of the invention provide a highly efficient meta-analysis infrastructure for performing research queries across a large number of studies and experiments from diverse sequencing technologies as well as different biological and chemical assays, data types and organisms, as well as systems to build and add to such an infrastructure. The methods, systems and apparatuses described enable combining orthogonal types of data and available public knowledge to elucidate mechanisms governing normal development, disease progression, as well as susceptibility of individuals to disease or response to drug treatments.Type: ApplicationFiled: March 6, 2017Publication date: June 22, 2017Inventors: Ilya Kupershmidt, Qiaojuan Jane Su
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Patent number: 9633166Abstract: According to various embodiments, aspects of the invention provide a highly efficient meta-analysis infrastructure for performing research queries across a large number of studies and experiments from diverse sequencing technologies as well as different biological and chemical assays, data types and organisms, as well as systems to build and add to such an infrastructure. The methods, systems and apparatuses described enable combining orthogonal types of data and available public knowledge to elucidate mechanisms governing normal development, disease progression, as well as susceptibility of individuals to disease or response to drug treatments.Type: GrantFiled: September 21, 2015Date of Patent: April 25, 2017Assignee: NextBioInventors: Ilya Kupershmidt, Qiaojuan Jane Su
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Publication number: 20160232224Abstract: The present invention relates to methods, systems and apparatus for capturing, integrating, organizing, navigating and querying large-scale data from high-throughput biological and chemical assay platforms. It provides a highly efficient meta-analysis infrastructure for performing research queries across a large number of studies and experiments from different biological and chemical assays, data types and organisms, as well as systems to build and add to such an infrastructure. According to various embodiments, methods, systems and interfaces for associating experimental data, features and groups of data related by structure and/or function with chemical, medical and/or biological terms in an ontology or taxonomy are provided. According to various embodiments, methods, systems and interfaces for filtering data by data source information are provided, allowing dynamic navigation through large amounts of data to find the most relevant results for a particular query.Type: ApplicationFiled: August 17, 2015Publication date: August 11, 2016Inventors: Ilya Kupershmidt, Qiaojuan Jane Su, Qingdi Liu, Satnam Alag, Suman Sundaresh
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Publication number: 20160132641Abstract: According to various embodiments, aspects of the invention provide a highly efficient meta-analysis infrastructure for performing research queries across a large number of studies and experiments from diverse sequencing technologies as well as different biological and chemical assays, data types and organisms, as well as systems to build and add to such an infrastructure. The methods, systems and apparatuses described enable combining orthogonal types of data and available public knowledge to elucidate mechanisms governing normal development, disease progression, as well as susceptibility of individuals to disease or response to drug treatments.Type: ApplicationFiled: September 21, 2015Publication date: May 12, 2016Inventors: Ilya Kupershmidt, Qiaojuan Jane Su
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Patent number: 9183349Abstract: According to various embodiments, aspects of the invention provide a highly efficient meta-analysis infrastructure for performing research queries across a large number of studies and experiments from diverse sequencing technologies as well as different biological and chemical assays, data types and organisms, as well as systems to build and add to such an infrastructure. The methods, systems and apparatuses described enable combining orthogonal types of data and available public knowledge to elucidate mechanisms governing normal development, disease progression, as well as susceptibility of individuals to disease or response to drug treatments.Type: GrantFiled: June 8, 2010Date of Patent: November 10, 2015Assignee: NextBioInventors: Ilya Kupershmidt, Qiaojuan Jane Su
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Patent number: 9141913Abstract: The present invention relates to methods, systems and apparatus for capturing, integrating, organizing, navigating and querying large-scale data from high-throughput biological and chemical assay platforms. It provides a highly efficient meta-analysis infrastructure for performing research queries across a large number of studies and experiments from different biological and chemical assays, data types and organisms, as well as systems to build and add to such an infrastructure. According to various embodiments, methods, systems and interfaces for associating experimental data, features and groups of data related by structure and/or function with chemical, medical and/or biological terms in an ontology or taxonomy are provided. According to various embodiments, methods, systems and interfaces for filtering data by data source information are provided, allowing dynamic navigation through large amounts of data to find the most relevant results for a particular query.Type: GrantFiled: March 4, 2009Date of Patent: September 22, 2015Assignee: NextBioInventors: Ilya Kupershmidt, Qiaojuan Jane Su, Qingdi Liu, Satnam Alag, Suman Sundaresh
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Publication number: 20150193576Abstract: According to various embodiments, aspects of the invention provide a highly efficient meta-analysis infrastructure for performing research queries across a large number of studies and experiments from diverse sequencing technologies as well as different biological and chemical assays, data types and organisms, as well as systems to build and add to such an infrastructure. The methods, systems and apparatuses described enable combining orthogonal types of data and available public knowledge to elucidate mechanisms governing normal development, disease progression, as well as susceptibility of individuals to disease or response to drug treatments.Type: ApplicationFiled: June 8, 2010Publication date: July 9, 2015Applicant: NextBioInventors: Ilya Kupershmidt, Qiaojuan Jane Su
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Publication number: 20130166599Abstract: The present invention relates to methods, systems and apparatus for capturing, integrating, organizing, navigating and querying large-scale data from high-throughput biological and chemical assay platforms. It provides a highly efficient meta-analysis infrastructure for performing research queries across a large number of studies and experiments from different biological and chemical assays, data types and organisms, as well as systems to build and add to such an infrastructure.Type: ApplicationFiled: August 17, 2012Publication date: June 27, 2013Applicant: NEXTBIOInventors: Ilya Kupershmidt, Qiaojuan Jane Su, Francois Andry
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Publication number: 20130166320Abstract: Provided herein are methods, systems and apparatus for querying and interpreting data derived from individual patients. The methods, systems and apparatus described herein can be used in clinical and research settings. Included are methods, systems and apparatus for identifying similar patients, germline DNA analysis, somatic tissue analysis, pathway-based therapy selection, prioritizing drugs, and querying a database to return patients and clinical attributes.Type: ApplicationFiled: September 17, 2012Publication date: June 27, 2013Applicant: NEXTBIOInventors: Ilya Kupershmidt, Qiaojuan Jane Su
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Patent number: 8364665Abstract: The present invention relates to methods, systems and apparatus for capturing, integrating, organizing, navigating and querying large-scale data from high-throughput biological and chemical assay platforms. It provides a highly efficient meta-analysis infrastructure for performing research queries across a large number of studies and experiments from different biological and chemical assays, data types and organisms, as well as systems to build and add to such an infrastructure. In particular, aspects of the invention relate to integrating, organizing, navigating and querying “directional” data, such as gene expression profiles.Type: GrantFiled: September 19, 2008Date of Patent: January 29, 2013Assignee: NextBioInventors: Qiaojuan Jane Su, Ilya Kupershmidt
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Patent number: 8275737Abstract: The present invention relates to methods, systems and apparatus for capturing, integrating, organizing, navigating and querying large-scale data from high-throughput biological and chemical assay platforms. It provides a highly efficient meta-analysis infrastructure for performing research queries across a large number of studies and experiments from different biological and chemical assays, data types and organisms, as well as systems to build and add to such an infrastructure.Type: GrantFiled: December 18, 2006Date of Patent: September 25, 2012Assignee: NextBioInventors: Ilya Kupershmidt, Qiaojuan Jane Su, Francois Andry
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Publication number: 20100318528Abstract: According to various embodiments, aspects of the invention provide a highly efficient meta-analysis infrastructure for performing research queries across a large number of studies and experiments from diverse sequencing technologies as well as different biological and chemical assays, data types and organisms, as well as systems to build and add to such an infrastructure. The methods, systems and apparatuses described enable combining orthogonal types of data and available public knowledge to elucidate mechanisms governing normal development, disease progression, as well as susceptibility of individuals to disease or response to drug treatments.Type: ApplicationFiled: June 8, 2010Publication date: December 16, 2010Applicant: NextBioInventors: Ilya Kupershmidt, Qiaojuan Jane Su
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Publication number: 20090222400Abstract: The present invention relates to methods, systems and apparatus for capturing, integrating, organizing, navigating and querying large-scale data from high-throughput biological and chemical assay platforms. It provides a highly efficient meta-analysis infrastructure for performing research queries across a large number of studies and experiments from different biological and chemical assays, data types and organisms, as well as systems to build and add to such an infrastructure. According to various embodiments, methods, systems and interfaces for associating experimental data, features and groups of data related by structure and/or function with chemical, medical and/or biological terms in an ontology or taxonomy are provided. According to various embodiments, methods, systems and interfaces for filtering data by data source information are provided, allowing dynamic navigation through large amounts of data to find the most relevant results for a particular query.Type: ApplicationFiled: March 4, 2009Publication date: September 3, 2009Applicant: NextBioInventors: Ilya Kupershmidt, Qiaojuan Jane Su, Qingdi Liu, Satnam Alag, Suman Sundaresh
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Publication number: 20090049019Abstract: The present invention relates to methods, systems and apparatus for capturing, integrating, organizing, navigating and querying large-scale data from high-throughput biological and chemical assay platforms. It provides a highly efficient meta-analysis infrastructure for performing research queries across a large number of studies and experiments from different biological and chemical assays, data types and organisms, as well as systems to build and add to such an infrastructure. In particular, aspects of the invention relate to integrating, organizing, navigating and querying “directional” data, such as gene expression profiles.Type: ApplicationFiled: September 19, 2008Publication date: February 19, 2009Applicant: NextBioInventors: Qiaojuan Jane SU, Ilya Kupershmidt
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Publication number: 20070162411Abstract: The present invention relates to methods, systems and apparatus for capturing, integrating, organizing, navigating and querying large-scale data from high-throughput biological and chemical assay platforms. It provides a highly efficient meta-analysis infrastructure for performing research queries across a large number of studies and experiments from different biological and chemical assays, data types and organisms, as well as systems to build and add to such an infrastructure.Type: ApplicationFiled: December 18, 2006Publication date: July 12, 2007Inventors: Ilya Kupershmidt, Qiaojuan Su, Francois Andry