Patents by Inventor James Robert Swartz

James Robert Swartz has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20110129438
    Abstract: Bacterial immunity proteins are utilized to increase immune response to an antigen of interest.
    Type: Application
    Filed: June 28, 2007
    Publication date: June 2, 2011
    Inventors: James Robert Swartz, Junhao Yang, Alexei M. Voloshin, Ronald Levy, Gregg Kanter, Shoshana Levy
  • Publication number: 20100183655
    Abstract: Bacterial immunity proteins are utilized to increase immune response to an antigen of interest.
    Type: Application
    Filed: January 14, 2010
    Publication date: July 22, 2010
    Inventors: James Robert Swartz, Junhao Yang, Alexei M. Voloshin, Ronald Levy, Gregg Kanter, Shoshana Levy
  • Publication number: 20100093024
    Abstract: Methods are provided for the utilization of bacterial cell-free extracts in the synthesis of polypeptides containing unnatural amino acids at one or more specified residues of the polypeptide.
    Type: Application
    Filed: June 29, 2007
    Publication date: April 15, 2010
    Inventors: Aaron R. Goerke, James Robert Swartz
  • Publication number: 20100063258
    Abstract: Polypeptide linkers with defined tertiary structures, usually of defined alpha helical structure, are used to join two domains in a fusion protein. In one embodiment of the invention, a method is provided for the cell-free synthesis of the fusion protein.
    Type: Application
    Filed: June 28, 2007
    Publication date: March 11, 2010
    Applicant: THE BOARD OF TRUSTEES OF THE LELAND STANFORD JUNIOR UNIVERSITY
    Inventors: James Robert Swartz, Junhao Yang, Alexei M. Voloshin
  • Publication number: 20090317861
    Abstract: Methods are provided for the utilization of bacterial cell-free extracts in the synthesis of high yields of virus like particles.
    Type: Application
    Filed: June 29, 2007
    Publication date: December 24, 2009
    Inventors: Bradley C. Bundy, James Robert Swartz
  • Publication number: 20090042244
    Abstract: Compositions and methods are provided for the in vitro synthesis of biological molecules in reaction mixtures comprising anti-foam agents. The reaction mix comprising antifoam agent may be a scaled up reaction, e.g. in reaction volume greater than at least about 15 ul. Reactions may be performed in various reactors, as known in the art, which include stirred reactors, bubble-column reactors; and the like.
    Type: Application
    Filed: March 21, 2005
    Publication date: February 12, 2009
    Applicant: THE BOARD OF TRUSTEES OF THE LELAND STANFORD JUNIOR UNIVERSITY
    Inventors: Alexei M. Voloshin, James Robert Swartz
  • Publication number: 20090029414
    Abstract: Methods are provided for the utilization of bacterial cell-free extracts in the synthesis of high yields of membrane- associated polypeptides.
    Type: Application
    Filed: October 31, 2006
    Publication date: January 29, 2009
    Inventors: James Robert Swartz, Jessica Wuu
  • Publication number: 20080138857
    Abstract: Biological macromolecules are synthesized in vitro under conditions wherein oxidative phosphorylation is activated.
    Type: Application
    Filed: January 8, 2008
    Publication date: June 12, 2008
    Inventors: James Robert Swartz, Michael Christopher Jewett
  • Patent number: 7351563
    Abstract: Enzymatically active hydrogenase is synthesized in a cell-free reaction. The hydrogenases are synthesized in a cell-free reaction comprising a cell extract derived from microbial strains expressing at least one hydrogenase accessory protein. In some embodiments, the extracts are produced under anerobic conditions.
    Type: Grant
    Filed: June 10, 2005
    Date of Patent: April 1, 2008
    Assignee: The Board of Trustees of the Leland Stanford Junior University
    Inventors: James Robert Swartz, Marcus Emil Boyer, James Alan Stapleton, Alfred M. Spormann, Chia-Wei Wang
  • Patent number: 7338789
    Abstract: Biological macromolecules are synthesized in vitro under conditions and in a reaction composition wherein oxidative phosphorylation is activated and protein folding is improved.
    Type: Grant
    Filed: August 18, 2003
    Date of Patent: March 4, 2008
    Assignee: The Board of Trustees of the Leland Stanford Junior University
    Inventors: James Robert Swartz, Michael Christopher Jewett
  • Patent number: 7312049
    Abstract: Compositions and methods are provided for the enhanced in vitro synthesis of protein molecules, by optimizing the metabolism of amino acids present in the reaction mix, preferably all amino acids in the reaction mixture. By performing synthesis with extracts from genetically modified microbial strains that are deficient in multiple amino acid metabolizing enzymes reduces the enzymatic activities responsible for catalyzing these reactions and improves the overall yield of synthesis.
    Type: Grant
    Filed: June 5, 2006
    Date of Patent: December 25, 2007
    Assignee: The Board of Trustees of the Leland Stanford Junior University
    Inventors: Kara Anne Calhoun, James Robert Swartz
  • Patent number: 7041479
    Abstract: Compositions and methods are provided for the enhanced in vitro synthesis of polypeptides containing disulfide bonds. In order to improve the performance of in vitro protein synthesis reactions, pre-treatment and redox buffering of the reaction mix is performed in order to optimize the redox potential. Exogenous enzymes that enhance protein folding and disulfide bond formation may also be added to the reaction.
    Type: Grant
    Filed: March 31, 2003
    Date of Patent: May 9, 2006
    Assignee: The Board of Trustess of the Leland Stanford Junior University
    Inventors: James Robert Swartz, Dong-Myung Kim
  • Patent number: 6994986
    Abstract: Compositions and methods are provided for the enhanced in vitro synthesis of polypeptides. In order to improve the performance of in vitro protein synthesis reactions, metabolic inhibitors, or manipulation of a source organism, is used to diminish or avoid the action of enzymes responsible for undesirable amino acids production or depletion. A homeostatic system may be used for production of ATP, where the required high energy phosphate bonds are generated in situ, e.g. through coupling with an oxidation reaction. The homeostatic energy source will typically lack high energy phosphate bonds itself, and will therefore utilize free phosphate in the reaction mix during generation of ATP. The homeostatic energy source is provided in combination with an enzyme that catalyzes the creation of high energy phosphate bonds and with an enzyme that can use that high energy phosphate bond to regenerate ATP.
    Type: Grant
    Filed: September 7, 2001
    Date of Patent: February 7, 2006
    Assignee: The Board of Trustees of the Leland Stanford University
    Inventors: James Robert Swartz, Dong-Myung Kim
  • Publication number: 20040209321
    Abstract: Biological macromolecules are synthesized in vitro under conditions and in a reaction composition wherein oxidative phosphorylation is activated and protein folding is improved.
    Type: Application
    Filed: August 18, 2003
    Publication date: October 21, 2004
    Inventors: James Robert Swartz, Michael Christopher Jewett
  • Publication number: 20040038332
    Abstract: Compositions and methods are provided for the enhanced in vitro synthesis of polypeptides containing disulfide bonds. In order to improve the performance of in vitro protein synthesis reactions, pre-treatment and redox buffering of the reaction mix is performed in order to optimize the redox potential. Exogenous enzymes that enhance protein folding and disulfide bond formation may also be added to the reaction.
    Type: Application
    Filed: March 31, 2003
    Publication date: February 26, 2004
    Inventors: James Robert Swartz, Dong-Myung Kim
  • Publication number: 20030113778
    Abstract: Compositions and methods are provided for the enhanced in vitro synthesis of nucleic acids. Nucleoside monophosphates are converted to nucleoside triphosphates by in situ reactions to continuously supply the required nucleoside triphosphates. This approach provides for more homeostatic reaction conditions and lower costs.
    Type: Application
    Filed: October 30, 2002
    Publication date: June 19, 2003
    Inventors: Jennifer Theresa Schulte, James Robert Swartz
  • Patent number: 6548276
    Abstract: Compositions and methods are provided for the enhanced in vitro synthesis of polypeptides containing disulfide bonds. In order to improve the performance of in vitro protein synthesis reactions, pre-treatment and redox buffering of the reaction mix is performed in order to optimize the redox potential. Exogenous enzymes that enhance protein folding and disulfide bond formation may also be added to the reaction.
    Type: Grant
    Filed: September 5, 2001
    Date of Patent: April 15, 2003
    Assignee: The Board of Trustees of the Leland Stanford Junior University
    Inventors: James Robert Swartz, Dong-Myung Kim
  • Publication number: 20020058303
    Abstract: Compositions and methods are provided for the enhanced in vitro synthesis of polypeptides containing disulfide bonds. In order to improve the performance of in vitro protein synthesis reactions, pre-treatment and redox buffering of the reaction mix is performed in order to optimize the redox potential. Exogenous enzymes that enhance protein folding and disulfide bond formation may also be added to the reaction.
    Type: Application
    Filed: September 5, 2001
    Publication date: May 16, 2002
    Inventors: James Robert Swartz, Dong-Myung Kim