Patents by Inventor John S. Bashkin

John S. Bashkin has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 7329392
    Abstract: An apparatus and method for performing successive chemical or biochemical operations in an automated or semi-automated format are disclosed. The apparatus includes (i) a substrate having two or more wells, where each well is separated from adjacent well(s) by an energy barrier, (ii), a magnetic bead having a surface on which at least one of said operations is performed, and (iii) electromagnets positioned adjacent said wells, for use in producing controlled-time electromagnetic fields in one or more selected wells. A control unit operatively coupled to the electromagnets functions to produce controlled-time electromagnetic forces on the bead that are effective to transfer the bead from one well to another across the energy barrier and optionally, to agitate the bead within a well.
    Type: Grant
    Filed: October 18, 2002
    Date of Patent: February 12, 2008
    Assignee: SRI International
    Inventors: Neville A. Bonwit, Ronald E. Pelrine, John S. Bashkin
  • Publication number: 20080003143
    Abstract: An apparatus and method for performing successive chemical or biochemical operations in an automated or semi-automated format are disclosed. The apparatus includes (i) a substrate having two or more wells, where each well is separated from adjacent well(s) by an energy barrier, (ii), a magnetic bead having a surface on which at least one of said operations is performed, and (iii) electromagnets positioned adjacent said wells, for use in producing controlled-time electromagnetic fields in one or more selected wells. A control unit operatively coupled to the electromagnets functions to produce controlled-time electromagnetic forces on the bead that are effective to transfer the bead from one well to another across the energy barrier and optionally, to agitate the bead within a well.
    Type: Application
    Filed: October 18, 2002
    Publication date: January 3, 2008
    Inventors: Neville A. Bonwit, Ronald E. Pelrine, John S. Bashkin
  • Patent number: 6734436
    Abstract: The invention relates to microfluidic devices and methods that employ electromagnetic radiation to move a droplet of fluid on a fluid-transporting surface of a substrate. Typically, radiation of a particular wavelength is directed through a substantially transparent material, and the radiation imparts an optical trapping force to move the droplet. In addition, a means for reducing evaporative loss from the droplet may be provided.
    Type: Grant
    Filed: August 7, 2002
    Date of Patent: May 11, 2004
    Assignee: SRI International
    Inventors: Gregory W. Faris, John S. Bashkin, William H. Wright, Richard P. Heydt, David MacQueen
  • Patent number: 6533912
    Abstract: The apparatus and method of the present invention disclose a system in which multiple injections may be made into a capillary array. The injections are spaced in time with each injection followed by an interval of electrophoresis. Once all samples are loaded into the capillaries, continuous electrophoresis and detection is used to separate and detect target compounds within the sample. The interval between injections is matched to the target compound migration rate to be sufficient to allow the target compounds to be detectably separated when the compounds reach the detector.
    Type: Grant
    Filed: May 16, 2001
    Date of Patent: March 18, 2003
    Assignee: Molecular Dynamics, Inc.
    Inventors: Elaine S. Mansfield, Christine Peponnet, John S. Bashkin, Curtis R. Kautzer
  • Publication number: 20030047688
    Abstract: The invention relates to microfluidic devices and methods that employ electromagnetic radiation to move a droplet of fluid on a fluid-transporting surface of a substrate. Typically, radiation of a particular wavelength is directed through a substantially transparent material, and the radiation imparts an optical trapping force to move the droplet. In addition, a means for reducing evaporative loss from the droplet may be provided.
    Type: Application
    Filed: August 7, 2002
    Publication date: March 13, 2003
    Inventors: Gregory W. Faris, John S. Bashkin, William H. Wright, Richard P. Heydt, David MacQueen
  • Publication number: 20020080349
    Abstract: A tube or chamber optimized for applications as part of an optical system includes an optically transmissive elongate tubular body having an elongate tubular body wall including an interior surface and an exterior surface. The interior surface of the tubular body wall defines an elongate bore for containment or transport of a sample material to be analyzed. The body wall further includes a first portion, through which incident radiation passes, having a non-uniform thickness about the sample passageway so as to optimize optical coupling therethrough.
    Type: Application
    Filed: December 22, 2000
    Publication date: June 27, 2002
    Inventors: Thomas M. Armstrong, John Lytle, John S. Bashkin
  • Publication number: 20010053554
    Abstract: The apparatus and method of the present invention disclose a system in which multiple injections may be made into a capillary array. The injections are spaced in time with each injection followed by an interval of electrophoresis. Once all samples are loaded into the capillaries, continuous electrophoresis and detection is used to separate and detect target compounds within the sample. The interval between injections is matched to the target compound migration rate to be sufficient to allow the target compounds to be detectably separated when the compounds reach the detector.
    Type: Application
    Filed: May 16, 2001
    Publication date: December 20, 2001
    Inventors: Elaine S. Mansfield, Christine Peponnet, John S. Bashkin, Curtis R. Kautrzer
  • Patent number: 6156178
    Abstract: The apparatus and method of the present invention disclose a system in which multiple injections may be made into a capillary array. The injections are spaced in time with each injection followed by an interval of electrophoresis. Once all samples are loaded into the capillaries, continuous electrophoresis and detection is used to separate and detect target compounds within the sample. The interval between injections is matched to the target compound migration rate to be sufficient to allow the target compounds to be detectably separated when the compounds reach the detector.
    Type: Grant
    Filed: July 13, 1999
    Date of Patent: December 5, 2000
    Assignee: Molecular Dynamics, Inc.
    Inventors: Elaine S. Mansfield, Christine Peponnet, John S. Bashkin, Curtis R. Kautzer
  • Patent number: 5728282
    Abstract: A capillary electrophoresis separation matrix for single-stranded nucleic acids, along with methods for using and preparing the matrix, are disclosed. The separation matrix provides denaturing conditions and contains hydroxyethyl cellulose (HEC) in combination with urea, and preferably also includes formamide. The separation matrix may be used for DNA sizing and sequencing applications and provides a single-base resolution to approximately 500 base pairs. The separation matrix is inexpensive, easy to prepare, requires no polymerization steps, and is of low enough viscosity to be pumped easily into and out of capillary tubes for electrophoresis. The low viscosity allows for high throughput of samples and reuse of the capillary tubes for numerous separations.
    Type: Grant
    Filed: April 12, 1996
    Date of Patent: March 17, 1998
    Assignee: Molecular Dynamics
    Inventors: John S. Bashkin, David L. Barker, Richard F. Johnston
  • Patent number: 5534123
    Abstract: A capillary electrophoresis separation matrix for single-stranded nucleic acids, along with methods for using and preparing the matrix, are disclosed. The separation matrix provides denaturing conditions and contains hydroxyethyl cellulose (HEC) in combination with urea, and preferably also includes formamide. The separation matrix may be used for DNA sizing and sequencing applications and provides a single-base resolution to approximately 500 base pairs. The separation matrix is inexpensive, easy to prepare, requires no polymerization steps, and is of low enough viscosity to be pumped easily into and out of capillary tubes for electrophoresis. The low viscosity allows for high throughput of samples and reuse of the capillary tubes for numerous separations.
    Type: Grant
    Filed: July 10, 1995
    Date of Patent: July 9, 1996
    Assignee: Molecular Dynamics
    Inventors: John S. Bashkin, David L. Barker, Richard F. Johnston