Patents by Inventor Joseph G. Sodroski

Joseph G. Sodroski has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20220402899
    Abstract: The present disclosure provides compounds of Formula (I) or pharmaceutically acceptable salts thereof: (I) wherein, R1 to R6 and X are defined herein. Also provided are pharmaceutical compositions comprising these compounds, methods for treating Human Immunodeficiency Virus (HIV-1) in a subject in need thereof using these compounds or pharmaceutical compositions, and methods for stabilizing the state-1 conformation of the HIV-1 envelope glycoproteins using these compounds or pharmaceutical compositions.
    Type: Application
    Filed: October 1, 2020
    Publication date: December 22, 2022
    Inventors: Amos B. SMITH, III, Althea Erica GAFFNEY, Joseph G. SODROSKI
  • Patent number: 9776963
    Abstract: The invention provides for compounds of formula I: wherein Z is absent or (CRARB)nW; each RA and RB is independently (i) H, alkyl, alkenyl, alkynyl, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, aralkyl, heteroaralkyl, haloalkyl, each of which may be optionally substituted; (ii) OH, ORc, NH2, NHRc, NRcRc, SH, S(O)mRc; or (iii) RA and RB together form C(O); W is absent, C(O), C(O)O, C(O)NRcRc, O, S(O)m, or NRcRc; Y is an optionally substituted heterocyclic, optionally substituted heteroaryl, optionally substituted cycloalkyl, optionally substituted aryl, or NRXRY; wherein Rx and Ry are each independently H, alkyl or aryl; X1 is selected from the group consisting of halogen, methyl, and hydroxyl; X2 is a halogen; each Rc is independently alkyl, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, aralkyl, or heteroaralkyl, each of which may be optionally substituted; m is O, 1, or 2; and n is 1, 2, 3, 4, 5, or 6; and pharmaceutically acceptable salts thereof.
    Type: Grant
    Filed: November 10, 2009
    Date of Patent: October 3, 2017
    Assignees: The Trustees of the University of Pennsylvania, Dana-Farber Cancer Institute, Inc., The Johns Hopkins University, Bryn Mawr College, The Trustees of Columbia University in the City of New York
    Inventors: Joseph G. Sodroski, Navid Madani, Arne Schön, Judith M. LaLonde, Joel R. Courter, Takahiro Soeta, Danny Ng, Ernesto Freire, Amos B. Smith, III, Amy M. Princiotto, Matthew Le-Khac, Wayne A. Hendrickson
  • Patent number: 7741024
    Abstract: An immunogenic proteoliposome containing a transmembrane protein or oligomeric complexes containing such proteins, including viral envelope glycoproteins, in a lipid membrane around an elliptoid or spherical shape. The shape preferably also contains an attractant such as streptavidin or avidin and the lipid membrane contains a moiety that binds to the attractant such as biotin. The immunogenic transmembrane protein is bound to a ligand which is anchored in the shape. Methods for making the immunogenic proteoliposomes are provided. uses of the proteoliposome are described, including their use as immunogens to elicit immune reaction, and their use in screening assays, including their use as antigens to screen antibody libraries, as well as for drug screening and the identification of ligands.
    Type: Grant
    Filed: July 24, 2007
    Date of Patent: June 22, 2010
    Assignee: Dana-Farber Cancer Institute, Inc.
    Inventors: Richard T Wyatt, Joseph G Sodroski, Tajib Mirzabekov, Christoph Grundner
  • Patent number: 7429653
    Abstract: The present application is directed to stabilized HIV envelope glycoprotein trimers. The trimers are stabilized by introducing trimeric motifs, preferably the GCN4 coiled coil or the fibritin trimeric domain, at certain sites, for example in the gp41 ectodomain. These stabilized trimers or DNA molecules encoding such trimers can be used to generate an immunogenic reaction. The trimers can also be used in assays to screen for molecules that interact with them—and to identify molecules that interact with specific sites.
    Type: Grant
    Filed: May 11, 2005
    Date of Patent: September 30, 2008
    Assignee: Dana-Farber Cancer Institute, Inc.
    Inventors: Joseph G. Sodroski, Richard Wyatt, Xinzhen Yang, Michael Farzan, Peter D. Kwong
  • Patent number: 7276579
    Abstract: An immunogenic proteoliposome containing a transmembrane protein or oligomeric complexes containing such proteins, including viral envelope glycoproteins, in a lipid membrane around an elliptoid or spherical shape. The shape preferably also contains an attractant such as streptavidin or avidin and the lipid membrane contains a moiety that binds to the attractant such as biotin. The immunogenic transmembrane protein is bound to a ligand which is anchored in the shape. Methods for making the immunogenic proteoliposomes are provided uses of the proteoliposome are described, including their use as immunogens to elicit immune reaction, and their use in screening assays, including their use as antigens to screen antibody libraries, as well as for drug screening and the identification of ligands.
    Type: Grant
    Filed: December 27, 2001
    Date of Patent: October 2, 2007
    Assignee: Dana-Farber Cancer Institute, Inc.
    Inventors: Richard T. Wyatt, Joseph G. Sodroski, Tajib Mirzabekov, Christoph Grunder
  • Patent number: 7105655
    Abstract: The present application is directed to stabilized envelope glycoprotein trimers. The trimers are stabilized by introducing disulfide bonds at certain sites in the gp41 ectodomain. DNA molecules encoding such trimers can be used to generate an immunogenic reaction.
    Type: Grant
    Filed: June 25, 2002
    Date of Patent: September 12, 2006
    Assignee: Dana-Farber Cancer Institute
    Inventors: Joseph G. Sodroski, Michael Farzan
  • Patent number: 7048929
    Abstract: A modified polypeptide corresponding to an envelope glycoprotein of a primate lentivirus is described. The polypeptide has been modified from the wild-type structure so that it has cysteine amino acid residues introduced to create disulfide bonds, a cavity is filled with hydrophobic amino acids, a Proresidue is introduced at a defined turn structure of the protein, or the hydrophobicity is increased across the interface between different domains, while retaining the overall 3-dimensional structure of a discontinuous conserved epitope of the wild-type protein. Preferably, the polypeptide has more than one of those characteristics. Preferably, the primate lentivirus is HIV, and the protein is HIV-1 gp120.
    Type: Grant
    Filed: November 10, 1998
    Date of Patent: May 23, 2006
    Assignees: Dana-Farber Cancer Institute, Inc., The Trustees of Columbia University in the City of New York
    Inventors: Joseph G Sodroski, Richard T. Wyatt, Peter D. Kwong, Wayne A. Hendrickson, Michael Farzan
  • Patent number: 6911205
    Abstract: The present application is directed to stabilized HIV envelope glycoprotein trimers. The trimers are stabilized by introducing trimeric motifs, preferably the GCN4 coiled coil or the fibritin trimeric domain at certain sites, for example in the gp41 ectodomain. These stabilized trimers or DNA molecules encoding such trimers can be used to generate an immunogenic reaction. The trimers can also be used in assays to screen for molecules that interact with them—and to identify molecules that interact with specific sites.
    Type: Grant
    Filed: March 18, 2002
    Date of Patent: June 28, 2005
    Assignees: Dana-Farber Cancer Institute, Inc., The Trustees of Columbia University
    Inventors: Joseph G. Sodroski, Richard Wyatt, Xinzhen Yang, Michael Farzan, Peter D. Kwong
  • Patent number: 6908617
    Abstract: A modified polypeptide corresponding to an envelope glycoprotein of a primate lentivirus is described. The polypeptide has been modified from the wild-type structure so that it has at least two of the glycosylation sites proximal to the CD4 binding site or chemokine receptor site altered so that the alteration prevents glycosylation at that site or where glycosylation sites distal to these sites have been derivatized with a molecular adjuvant, while retaining the overall 3-dimensional structure of a discontinuous conserved epitope of the wild-type protein. Preferably, the polypeptide has both changes. Preferably, the primate lentivirus is HIV, and the protein is HIV-1 gp 120.
    Type: Grant
    Filed: November 10, 1998
    Date of Patent: June 21, 2005
    Assignees: Dana-Farber Cancer Institute, Inc., The Trustees of Columbia University in the City of New York
    Inventors: Richard T. Wyatt, Joseph G. Sodroski, Peter D. Kwong, Wayne A. Hendrickson
  • Patent number: 6808923
    Abstract: The invention is directed to a lentiviral vector system that can be used for episomal replication of a desired gene. The vector system contains a first vector containing a lentiviral gag gene encoding a lentiviral gag protein, a second vector containing an env gene encoding a functional envelope protein, and a lentiviral pol gene encoding a lentiviral pol protein. The pol protein is at least integrase, but that the integrase has been modified so that it is not capable of integration. This pol gene can be on the first or second vectors or on a third vector. The lentiviral gag and pol and the envelope protein are not on a single vector, and these vectors do not contain nucleotides to effectively package lentiviral RNA. The system also contains another vector having a nucleic acid sequence encoding a target molecule operably linked to a component of an episomal replicon and a lentiviral packaging sequence.
    Type: Grant
    Filed: November 21, 2001
    Date of Patent: October 26, 2004
    Assignee: Dana-Farber Cancer Institute, Inc.
    Inventors: Alan Engelman, Wolfgang Hofmann, Joseph G. Sodroski, Richard Lu
  • Patent number: 6761902
    Abstract: A stable proteoliposome containing an integral membrane protein in a lipid membrane around an elliptoid or spherical shape. The shape preferably contains an attractant such as streptavidin or avidin and the lipid membrane contains a moiety that binds to the attractant such as biotin. The integral membrane protein is bound to a ligand which is anchored in the shape. Methods for making the proteoliposomes are provided. Kits for making the proteoliposome are described, as are the uses of the proteoliposome.
    Type: Grant
    Filed: December 27, 2000
    Date of Patent: July 13, 2004
    Assignee: Dana-Farber Cancer Institute, Inc.
    Inventors: Joseph G. Sodroski, Tajib Mirzabekov
  • Publication number: 20040109887
    Abstract: An immunogenic proteoliposome containing a transmembrane protein or oligomeric complexes containing such proteins, including viral envelope glycoproteins, in a lipid membrane around an elliptoid or spherical shape. The shape preferably also contains an attractant such as streptavidin or avidin and the lipid membrane contains a moiety that binds to the attractant such as biotin. The immunogenic transmembrane protein is bound to a ligand which is anchored in the shape. Methods for making the immunogenic proteoliposomes are provided uses of the proteoliposome are described, including their use as immunogens to elicit immune reaction, and their use in screening assays, including their use as antigens to screen antibody libraries, as well as for drug screening and the identification of ligands.
    Type: Application
    Filed: December 17, 2003
    Publication date: June 10, 2004
    Inventors: Richard T. Wyatt, Joseph G Sodroski, Tajib Mirzabekov, Christoph Grundner
  • Patent number: 6716429
    Abstract: Biochemical and structural studies of fragments of the ectodomain of the human immunodeficiency virus type 1 (HIV-1) gp41 transmembrane envelope glycoprotein have demonstrated that the molecular contacts between alpha helices allow the formation of a trimeric coiled coil. By introducing cysteine residues into specific locations along these alpha helices, the normally labile HIV-1 gp160 envelope glycoprotein was converted into a stable disulfide-linked oligomer. Although proteolytic cleavage into gp120 and gp41 glycoproteins was largely blocked, the disulfide-linked oligomer was efficiently transported to the cell surface and was recognized by a series of conformationally dependent antibodies. The pattern of hetero-oligomer formation between this construct and an analogous construct lacking portions of the gp120 variable loops and of the gp41 cytoplasmic tail demonstrates that these oligomers are trimers.
    Type: Grant
    Filed: October 1, 1998
    Date of Patent: April 6, 2004
    Assignee: Dana-Farber Cancer Institute, Inc.
    Inventors: Joseph G. Sodroski, Michael Farzan
  • Publication number: 20030086943
    Abstract: The present application is directed to stabilized envelope glycoprotein trimers. The trimers are stabilized by introducing disulfide bonds at certain sites in the gp41 ectodomain. DNA molecules encoding such trimers can be used to generate an immunogenic reaction.
    Type: Application
    Filed: June 25, 2002
    Publication date: May 8, 2003
    Inventors: Joseph G. Sodroski, Michael Farzan
  • Publication number: 20010034432
    Abstract: A stable proteoliposome containing an integral membrane protein in a lipid membrane around an elliptoid or spherical shape. The shape preferably contains an attractant such as streptavidin or avidin and the lipid membrane contains a moiety that binds to the attractant such as biotin. The integral membrane protein is bound to a ligand which is anchored in the shape. Methods for making the proteoliposomes are provided. Kits for making the proteoliposome are described, as are the uses of the proteoliposome.
    Type: Application
    Filed: December 27, 2000
    Publication date: October 25, 2001
    Applicant: Dana-Farber Cancer Institute, Inc.
    Inventors: Joseph G. Sodroski, Tajib Mirzabekov
  • Patent number: 6143520
    Abstract: The present invention is related to vectors and methods for increasing the expression of a desired gene product. Preferably this invention is used with genes expressing proteins that are not well tolerated by mammalian cells or where high levels of expression are necessary. In certain preferred embodiments it can be used as part of a multi-tiered expression system and with methods of intracellularly targeting a molecule.
    Type: Grant
    Filed: April 15, 1998
    Date of Patent: November 7, 2000
    Assignee: Dana-Farber Cancer Institute, Inc.
    Inventors: Wayne A. Marasco, Jennifer Richardson, Maria Cristina Parolin, Joseph G. Sodroski
  • Patent number: 5981276
    Abstract: Packaging defective and packaging proficient HIV vectors are disclosed. These vectors can be used to establish HIV packaging defective cell lines, and to package desired genes. These cell lines can be used in developing a vaccine, HIV antibodies and as part of a system for gene transfer. The packaging proficient vector can be used to target HIV target cells.
    Type: Grant
    Filed: August 20, 1997
    Date of Patent: November 9, 1999
    Assignee: Dana-Farber Cancer Institute
    Inventors: Joseph G. Sodroski, William A. Haseltine, Mark Poznansky, Andrew Lever
  • Patent number: 5858366
    Abstract: Immunogenic peptides containing amino acid residues which define a binding site to a CD4 receptor are disclosed. Antibodies to these peptides are also disclosed. Methods of reducing the ability of a gp12O env protein to bind to CD4 are also disclosed. Methods of treatment and prophylaxis using these antibodies and peptides are also described.
    Type: Grant
    Filed: October 12, 1993
    Date of Patent: January 12, 1999
    Assignee: Dana-Farber Cancer Institute
    Inventors: Joseph G. Sodroski, William A. Haseltine, Udy Olshevsky, Eirik Helseth, Craig D. Furman
  • Patent number: 5852186
    Abstract: The present invention is directed to a recombinant human monoclonal antibody which binds to a discontinuous epitope on the HIV gp120 envelope glycoprotien, blocks the binding of gp120 to the CD4 receptor, and neutralizes a broad range of HIV isolates. The present invention also provides the primary nucleotide and deduced amino acid sequences of the rearranged heavy and light chains of the recombinant monoclonal antibody of the present invention, and a method of screening for antibodies which block binding of envelope glycoprotein to the CD4 receptor.
    Type: Grant
    Filed: June 7, 1995
    Date of Patent: December 22, 1998
    Assignees: Dana-Farber Cancer Insitute, New England Deaconess Hospital Corp.
    Inventors: Joseph G. Sodroski, Wayne A. Marasco, Marshall R. Posner, William A. Haseltine
  • Patent number: 5817316
    Abstract: Immunogenic peptides containing amino acid residues which define a binding site to a CD4 receptor are disclosed. Antibodies to these peptides are also disclosed. Methods of reducing the ability of a gp120 env protein to bind to CD4 are also disclosed. Methods of treatment and prophylaxis using these antibodies and peptides are also described.
    Type: Grant
    Filed: March 26, 1992
    Date of Patent: October 6, 1998
    Assignee: Dana-Farber Cancer Instistute
    Inventors: Joseph G. Sodroski, William A. Haseltine, Craig D. Furman, Udy Olshevsky, Eirik Helseth, Richard Wyatt, Markus Thali