Patents by Inventor Michael G. Saghbini

Michael G. Saghbini has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11959134
    Abstract: Methods of double-stranded nucleic acid sequence determination and assembly that are able to identify insertions, deletions, repeat region sizes and genomic rearrangements, for example, are disclosed herein, which can use relatively large labeled nucleic acid fragments to analyze the structure of even larger genetic regions. In some embodiments these methods involve the use of certain parameters which unexpectedly improve overall method performance. In some embodiments these methods involve sample labeling that does not result in the formation of single-stranded nucleic acid fragment labeling intermediaries.
    Type: Grant
    Filed: June 23, 2020
    Date of Patent: April 16, 2024
    Assignee: Bionano Genomics, Inc.
    Inventors: Michael G. Saghbini, Henry B. Sadowski, Goran Pljevaljcic, Alex R. Hastie, Han Cao
  • Publication number: 20210010074
    Abstract: Methods of double-stranded nucleic acid sequence determination and assembly that are able to identify insertions, deletions, repeat region sizes and genomic rearrangements, for example, are disclosed herein, which can use relatively large labeled nucleic acid fragments to analyze the structure of even larger genetic regions. In some embodiments these methods involve the use of certain parameters which unexpectedly improve overall method performance. In some embodiments these methods involve sample labeling that does not result in the formation of single-stranded nucleic acid fragment labeling intermediaries.
    Type: Application
    Filed: June 23, 2020
    Publication date: January 14, 2021
    Inventors: Michael G. Saghbini, Henry B. Sadowski, Goran Pljevaljcic, Alex R. Hastie, Han Cao
  • Publication number: 20170073666
    Abstract: Methods and compositions for processing polynucleotides are provided according to some embodiments herein. In some embodiments, a sample is immobilized in a porous matrix, and non-polynucleotides are removed from the sample. In some embodiments, polynucleotides are labeled or enzymatically modified the matrix. In some embodiments, labeled or enzymatically modified polynucleotides are removed from the matrix for analysis.
    Type: Application
    Filed: March 5, 2015
    Publication date: March 16, 2017
    Inventors: William Stedman, Michael G Saghbini, Han Cao, Alex R Hastie
  • Publication number: 20160369331
    Abstract: Methods of double-stranded nucleic acid sequence determination and assembly that are able to identify insertions, deletions, repeat region sizes and genomic rearrangements, for example, are disclosed herein, which can use relatively large labeled nucleic acid fragments to analyze the structure of even larger genetic regions. In some embodiments these methods involve the use of certain parameters which unexpectedly improve overall method performance. In some embodiments these methods involve sample labeling that does not result in the formation of single-stranded nucleic acid fragment labeling intermediaries.
    Type: Application
    Filed: February 17, 2015
    Publication date: December 22, 2016
    Inventors: Michael G. Saghbini, Henry B. Sadowski, Goran Pljevaljcic, Alex R. Hastie, Han Cao
  • Publication number: 20160046992
    Abstract: Methods are provided for detecting and quantitating molecules using fluidics. In preferred embodiments, the methods comprise analyzing blood to detect the presence of circulating DNA or cells from a fetus or tumor.
    Type: Application
    Filed: February 19, 2014
    Publication date: February 18, 2016
    Inventors: Han Cao, Ming H. Xiao, Alex Hastie, Michael G. Saghbini, Henry B. Sadowski
  • Publication number: 20160017316
    Abstract: Disclosed herein are methods for isolation of long DNA molecules, for example megabase-sized genomic DNA molecules, from a biological sample, for example plant and animal tissues.
    Type: Application
    Filed: July 17, 2015
    Publication date: January 21, 2016
    Inventor: Michael G. Saghbini
  • Publication number: 20150368706
    Abstract: Methods for single-molecule preparation and analysis are disclosed herein. The methods can, for example, be used for isolating and analyzing DNA from various biological samples.
    Type: Application
    Filed: February 3, 2014
    Publication date: December 24, 2015
    Inventors: Han Cao, Ming H. Xiao, Alex Hastie, Michael G. Saghbini, Henry B. Sadowski
  • Publication number: 20140221218
    Abstract: Methods for single-molecule preparation and analysis are disclosed herein. The methods can, for example, be used for isolating and analyzing DNA from various biological samples.
    Type: Application
    Filed: February 3, 2014
    Publication date: August 7, 2014
    Applicant: Bionano Genomics, Inc.
    Inventors: Han Cao, Ming Xiao, Alex Hastie, Michael G. Saghbini, Henry B. Sadowski
  • Publication number: 20100055672
    Abstract: The present disclosure provides methods, reagents and kits for the detection of all known human variants of influenza A virus and at least 90% of avian and swine variants of influenza A virus in a biological sample, based on amplification primers and detection probes that are specific to a highly conserved region of the influenza A matrix gene.
    Type: Application
    Filed: May 10, 2007
    Publication date: March 4, 2010
    Applicant: GENEOHM SCIENCES, INC.
    Inventor: Michael G. Saghbini
  • Publication number: 20040132082
    Abstract: The invention describes a method for the isolation of components from samples, particularly large molecular weight DNA from biological samples. The method involves the application of controlled oscillatory mechanical energy to the sample for short periods of time of about 5 to 60 seconds to lyse the sample and release the component(s) from the sample, followed by standard isolation methods. In preferred embodiments, the method includes the use of a spherical particle for applying the mechanical energy.
    Type: Application
    Filed: December 17, 2003
    Publication date: July 8, 2004
    Applicant: BIO101
    Inventors: James W. Gautsch, Michael G. Saghbini, David A. Lippman, Richard C. Dana
  • Patent number: 6706498
    Abstract: The invention describes a method for the isolation of components from samples, particularly large molecular weight DNA from biological samples. The method involves the application of controlled oscillatory mechanical energy to the sample for short periods of time of about 5 to 60 seconds to lyse the sample and release the component(s) from the sample, followed by standard isolation methods. In preferred embodiments, the method includes the use of a spherical particle for applying the mechanical energy.
    Type: Grant
    Filed: May 22, 2001
    Date of Patent: March 16, 2004
    Assignee: Bio101, Inc.
    Inventors: James W. Gautsch, Michael G. Saghbini, David A. Lippman, Richard C. Dana
  • Publication number: 20020172949
    Abstract: The invention describes a method for the isolation of components from samples, particularly large molecular weight DNA from biological samples. The method involves the application of controlled oscillatory mechanical energy to the sample for short periods of time of about 5 to 60 seconds to lyse the sample and release the component(s) from the sample, followed by standard isolation methods. In preferred embodiments, the method includes the use of a spherical particle for applying the mechanical energy.
    Type: Application
    Filed: May 22, 2001
    Publication date: November 21, 2002
    Applicant: BIO 101, Inc.
    Inventors: James W. Gautsch, Michael G. Saghbini, David A. Lippman, Richard C. Dana
  • Patent number: 6235501
    Abstract: The invention describes a method for the isolation of components from samples, particularly large molecular weight DNA from biological samples. The method involves the application of controlled oscillatory mechanical energy to the sample for short periods of time of about 5 to 60 seconds to lyse the sample and release the component(s) from the sample, followed by standard isolation methods. In preferred embodiments, the method includes the use of a spherical particle for applying the mechanical energy.
    Type: Grant
    Filed: September 25, 1997
    Date of Patent: May 22, 2001
    Assignee: Bio101, Inc.
    Inventors: James W. Gautsch, Michael G. Saghbini, David A. Lippman, Richard C. Dana