Patents by Inventor Pal Nyren

Pal Nyren has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 7648824
    Abstract: The present invention provides a method of identifying a base at a target position in a sample nucleic acid sequence, said method comprising: subjecting a primer hybridised to said sample nucleic acid immediately adjacent to the target position, to a polymerase primer extension reaction in the presence of a nucleotide, whereby the nucleotide will only become incorporated if it is complementary to the base in the target position, and determining whether or not said nucleotide is incorporated by detecting whether PPi is released, the identity of the target base being determined from the identity of any nucleotide incorporated, wherein, where said nucleotide comprises an adenine base, an ?-thio triphosphate analogue of said nucleotide is used, ant the Rp isomer of said analogue and/or the degradation products of said analogue are eliminated from the polymerase reaction step.
    Type: Grant
    Filed: November 26, 2008
    Date of Patent: January 19, 2010
    Assignee: Qiagen GmbH
    Inventors: Pal Nyren, Mostafa Ronaghi, Annika Tallsjo
  • Publication number: 20090155801
    Abstract: The present invention provides a method of identifying a base at a target position in a sample nucleic acid sequence, said method comprising: subjecting a primer hybridised to said sample nucleic acid immediately adjacent to the target position, to a polymerase primer extension reaction in the presence of a nucleotide, whereby the nucleotide will only become incorporated if it is complementary to the base in the target position, and determining whether or not said nucleotide is incorporated by detecting whether PPi is released, the identity of the target base being determined from the identity of any nucleotide incorporated, wherein, where said nucleotide comprises an adenine base, an ?-thio triphosphate analogue of said nucleotide is used, ant the Rp isomer of said analogue and/or the degradation products of said analogue are eliminated from the polymerase reaction step.
    Type: Application
    Filed: November 26, 2008
    Publication date: June 18, 2009
    Applicant: Biotage AB
    Inventors: Pal Nyren, Mostafa Ronaghi, Annika Tallsjo
  • Patent number: 7459311
    Abstract: The present invention provides a method of identifying a base at a target position in a sample nucleic acid sequence, said method comprising: subjecting a primer hybridised to said sample nucleic acid immediately adjacent to the target position, to a polymerase primer extension reaction in the presence of a nucleotide, whereby the nucleotide will only become incorporated if it is complementary to the base in the target position, and determining whether or not said nucleotide is incorporated by detecting whether Ppi is released, the identity of the target base being determined from the identity of any nucleotide incorporated, wherein, where said nucleotide comprises an adenine base, an ?-thio triphosphate analogue of said nucleotide is used, and the Rp isomer of said analogue and/or the degradation products of said analogue are eliminated from the polymerase reaction step.
    Type: Grant
    Filed: September 7, 2001
    Date of Patent: December 2, 2008
    Assignee: Biotage AB
    Inventors: Pål Nyren, Mostafa Ronaghi, Annika Tallsjö
  • Publication number: 20040142330
    Abstract: The present invention provides a method of identifying a base at a target position in a sample nucleic acid sequence, said method comprising: subjecting a primer hybridised to said sample nucleic acid immediately adjacent to the target position, to a polymerase primer extension reaction in the presence of a nucleotide, whereby the nucleotide will only become incorporated if it is complementary to the base in the target position, and determining whether or not said nucleotide is incorporated by detecting whether Ppi is released, the identity of the target base being determined from the identity of any nucleotide incorporated, wherein, where said nucleotide comprises an adenine base, an &agr;-thio triphosphate analogue of said nucleotide is used, ant the Rp isomer of said analogue and/or the degradation products of said analogue are eliminated from the polymerase reaction step.
    Type: Application
    Filed: August 1, 2003
    Publication date: July 22, 2004
    Inventors: Pal Nyren, Mostafa Ronaghi, Annika Tallsjo
  • Publication number: 20030104372
    Abstract: The present invention provides methods of allele-specific primer extension useful for detecting mutations and genetic variations.
    Type: Application
    Filed: February 23, 2001
    Publication date: June 5, 2003
    Applicant: PYROSEQUENCING AB.
    Inventors: Afshin Ahmadian, Joakim Lundeberg, Pal Nyren
  • Patent number: 6258568
    Abstract: The present invention relates to a method of sequencing DNA, based on the detection of base incorporation by the release of pyrophosphate (PPi) and simultaneous enzymatic nucleotide degradation.
    Type: Grant
    Filed: July 23, 1999
    Date of Patent: July 10, 2001
    Assignee: Pyrosequencing AB
    Inventor: Pal Nyren
  • Patent number: 6210891
    Abstract: The present invention provides a method of identifying a base at a target position in a single-stranded sample DNA sequence wherein an extension primer, which hybridizes to the sample DNA immediately adjacent to the target position, is provided and the sample DNA and extension primer are subjected to a polymerization reaction in the presence of a deoxynucleotide or dideoxynucleotide, whereby the deoxynucleotide or dideoxynucleotide will only become incorporated and release pyrophosphate if it is complementary to the base in the target position. Release of pyrophosphate is detected enzymatically and pyrophosphate detection enzyme(s) are included in the polymerization step.
    Type: Grant
    Filed: July 6, 1999
    Date of Patent: April 3, 2001
    Assignee: Pyrosequencing AB
    Inventors: Pål Nyren, Mathias Uhlen, Mostafa Ronaghi