Patents by Inventor Philippe Marlière

Philippe Marlière has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20150118725
    Abstract: Described is a method for generating isoprenol through a biological process. More specifically, described is a method for producing isoprenol from mevalonate.
    Type: Application
    Filed: April 4, 2013
    Publication date: April 30, 2015
    Inventors: Marc Delcourt, Maria Anissimova, Philippe Marliere
  • Patent number: 9017977
    Abstract: Described is a method for the production of 3-hydroxy-3-methylbutyric acid by enzyme-catalyzed covalent bond formation between the carbon atom of the oxo group of acetone and the methyl group of a compound which provides an activated acetyl group. Also described are recombinant organisms which produce 3-hydroxy-3-methylbutyric acid, and related compositions and methods.
    Type: Grant
    Filed: September 14, 2010
    Date of Patent: April 28, 2015
    Assignee: Scientist of Fortune S.A.
    Inventor: Philippe Marlière
  • Publication number: 20140370565
    Abstract: The present invention relates to a method for generating 1,3-diene compounds through a biological process. More specifically, the invention relates to a method for producing 1,3-diene compounds (for example butadiene or isoprene) from molecules of the 3-hydroxyalk-4-enoate type or from 3-phosphonoxyalk-4-enoates.
    Type: Application
    Filed: December 18, 2012
    Publication date: December 18, 2014
    Inventor: Philippe Marliere
  • Publication number: 20140256009
    Abstract: Described is a method for the enzymatic production of butadiene which allows to produce butadiene from crotyl alcohol. Also described are enzyme combinations and compositions containing such enzyme combinations which allow the enzymatic conversion of crotyl alcohol into butadiene. Furthermore, the invention relates to microorganisms which have been genetically modified so as to be able to produce butadiene from crotyl alcohol. Moreover, the invention relates to a method for the enzymatic production of crotyl alcohol from crotonyl-Coenzyme A. The obtained crotyl alcohol can be further converted into butadiene as described herein. Also described are enzyme combinations which allow to convert crotonyl-Coenzyme A into crotyl alcohol as well as (micro)organisms which express such enzyme combinations.
    Type: Application
    Filed: October 18, 2012
    Publication date: September 11, 2014
    Applicant: SCIENTIST OF FORTUNE, S.A.
    Inventor: Philippe Marliere
  • Publication number: 20140248669
    Abstract: Described are recombinant microorganisms characterized by having phosphoketolase activity, having a diminished or inactivated Embden-Meyerhof-Parnas pathway (EMPP) by inactivation of the gene(s) encoding phosphofructokinase or by reducing phosphofructokinase activity as compared to a non-modified microorganism and having a diminished or inactivated oxidative branch of the pentose phosphate pathway (PPP) by inactivation of the gene(s) encoding glucose-6-phosphate dehydrogenase or by reducing glucose-6-phosphate dehydrogenase activity as compared to a non-modified microorganism. These microorganisms can be used for the production of useful metabolites such as acetone, isobutene or propene.
    Type: Application
    Filed: July 12, 2012
    Publication date: September 4, 2014
    Applicant: SCIENTIST OF FORTUNE, S.A.
    Inventor: Philippe Marliere
  • Publication number: 20130316425
    Abstract: The present invention relates to a method for generating alkenes through a biological process. More specifically, the invention relates to a method for producing alkenes (for example propylene, ethylene, 1-butylene, isobutylene or isoamylene) from molecules of the 3-hydroxyalkanoate type.
    Type: Application
    Filed: October 18, 2011
    Publication date: November 28, 2013
    Applicants: Scientist of Fortune, S.A., Global Bioenergenies
    Inventors: Philippe Marlière, Marc Delcourt, Maria Anissimova, Richard Tallon
  • Publication number: 20130052706
    Abstract: Described is a method for the enzymatic production of isoprenol using mevalonate as a substrate and enzymatically converting it by a decarboxylation step into isoprenol as well as the use of an enzyme which is capable of catalyzing the decarboxylation of mevalonate for the production of isoprenol from mevalonate. Furthermore described is the use of mevalonate as a starting material for the production of isoprenol in an enzymatically catalysed reaction.
    Type: Application
    Filed: December 22, 2009
    Publication date: February 28, 2013
    Inventors: Philippe Marliere, Maria Anissimova, Romain Chayot, Marc Delcourt
  • Publication number: 20120245029
    Abstract: This invention provides phosphate-modified nucleosides represented by the structural formula (I): wherein W is O or S, and wherein B, R1; R3 and R2. are as defined herein. These compounds are useful as substrates for DNA/RNA polymerases, and as anti-viral agents in particular against HIV-1.
    Type: Application
    Filed: May 12, 2010
    Publication date: September 27, 2012
    Applicant: Katholieke Universiteit Leuven
    Inventors: Piet Herdewijn, Philippe Marlière
  • Publication number: 20120220001
    Abstract: Described is a method for the production of 3-hydroxy-3-methylbutyric acid by enzyme-catalyzed covalent bond formation between the carbon atom of the oxo group of acetone and the methyl group of a compound which provides an activated acetyl group. Also described are recombinant organisms which produce 3-hydroxy-3-methylbutyric acid, and related compositions and methods.
    Type: Application
    Filed: September 14, 2010
    Publication date: August 30, 2012
    Inventor: Philippe Marlière
  • Publication number: 20120108533
    Abstract: This invention provides phosphate-modified nucleosides represented by the structural formula: wherein W is O or S, and wherein B, R1; R3 and R2. are s defined herein. These compounds are useful as substrates for DNA/RNA polymerases, and as anti-viral agents in particular against HIV-1.
    Type: Application
    Filed: April 30, 2010
    Publication date: May 3, 2012
    Applicant: Katholieke Universiteit Leuven, K.U.Leuven R&D
    Inventors: Piet Herdewijn, Philippe Marlière
  • Publication number: 20110165644
    Abstract: The present invention relates to a method for generating alkenes biologically. It relates more particularly to a method for producing terminal alkenes by enzymatic decarboxylation of 3-hydroxyalkanoate molecules. The invention also relates to the enzymatic systems and the microbial strains used, and also to the products obtained.
    Type: Application
    Filed: July 6, 2009
    Publication date: July 7, 2011
    Inventor: Philippe Marliere
  • Patent number: 7960103
    Abstract: The present invention relates to a method for generating a novel form of life comprising the steps consisting of: a) irreversible alteration of the genome of a microbial clone; b) cultivation of a vast population of microbial cells originating from the altered clone obtained in step a) during numerous generations under conditions allowing selection for a higher and stable proliferation rate; c) isolation of descendant clones within the cultivated population of step b) still bearing the alteration of step a).
    Type: Grant
    Filed: September 13, 2006
    Date of Patent: June 14, 2011
    Assignees: Institut Pasteur, Evologic SA, Centre National de la Recherche Scientifique
    Inventors: Rupert Mutzel, Philippe Marliere, Didier Mazel
  • Patent number: 7892838
    Abstract: The invention relates to a method for altering a protein X such as to modify the characteristics thereof by a) obtaining the mutants X* of the sequence coding for protein X, by means of aleatory mutagenesis, b) transformation of cells with a phenotype [P-] with vectors comprising the mutated nucleic acids obtained in step (a) which code for proteins X*, where P-signifies that said cells are auxotrophic for substance P, P begin the product of the action of X on the natural substrate thereof S, c) culturing said cells in a medium comprising a substrate S*, S* being an analogue of the natural substrate S of the protein X, d) selection of the cells [P-:: X*] which have survived step c) in which the proteins X* can biosynthesise the product P from the substrate S*.
    Type: Grant
    Filed: April 13, 2007
    Date of Patent: February 22, 2011
    Assignees: Institut Pasteur, Centre National de la Recherche Scientifique (CNRS)
    Inventors: Pierre-Alexandre Kaminski, Philippe Marliere
  • Patent number: 7858775
    Abstract: This invention relates to a process for preparing 2?-deoxynucleoside compounds or 2?-deoxynucleoside precursors using 2-dehydro-3-deoxy-D-gluconic acid (usually abbreviated as KDG) or its salts as a starting material. A variety of 2?-deoxynucleosides and their analogues are used as a starting material for synthesis or drug formulation in production of an antiviral, anticancer or antisense agent.
    Type: Grant
    Filed: June 24, 2004
    Date of Patent: December 28, 2010
    Assignees: Rhodia Chimie, Evologic S.A., Marliere Technologies Societe Civile
    Inventors: Volker Dóring, Denis Thibaut, Annett Kreimeyer, Philippe Marliere
  • Publication number: 20100286386
    Abstract: Nucleotide analogues comprising a reactive hydrazide function (formula II) used as initial synthons for preparing compounds (formula I) capable of inducing mutations or capable of inhibiting a DNA polymerase or a kinase provided. Nucleic acids comprising the nucleotide and nucleoside analogues are also provided. Methods of using the compounds are also provided.
    Type: Application
    Filed: November 14, 2007
    Publication date: November 11, 2010
    Inventors: Philippe Marliere, Sylvie Pochet
  • Patent number: 7736899
    Abstract: The present invention relates to a method for providing bacterial or yeast cells with the capacity to produce a protein, the amino acid sequence of which comprises at least one unconventional amino acid. The method involves (a) introducing at least one missense mutation in a target codon of a gene encoding a protein required for the growth of the bacterial or yeast cells, where the mutated protein synthesized from the mutated gene is not functional in the bacterial or yeast cells. The method also involves (b) selecting the bacterial or yeast cells obtained in (a) in a culture medium which (1) does not contain a nutrient compensating for the loss of functionality of the mutated protein and (2) contains an unconventional amino acid which restores the functionality of the protein required for growth of the bacterial or yeast cells, in which the unconventional amino acid is that encoded by the target codon.
    Type: Grant
    Filed: October 28, 1999
    Date of Patent: June 15, 2010
    Assignee: Institut Pasteur
    Inventors: Philippe Marliere, Volker Doring, Henning Mootz
  • Publication number: 20100136693
    Abstract: The invention relates to a method for artificial in vivo evolution of proteins, said method making it possible to bring about the evolution of a protein X by complementation of a relative protein Y, X and Y both belonging to the same class of enzyme commission (EC) nomenclature or belonging to related classes. The mutants D133E and R104Q of desoxycytidine kinase (DCK) were obtained; both of said mutations result in acquisition of thymidine kinase activity by DCK.
    Type: Application
    Filed: May 8, 2009
    Publication date: June 3, 2010
    Inventors: Philippe Marliere, Sylvie Pochet, Madeleine Bouzon
  • Publication number: 20100015685
    Abstract: The invention concerns novel polypeptides and their fragments, isolated from Lactobacillus, having at least a N-deoxyribosyl transferase activity, the polynucleotides encoding said polypeptides, cloning and/or expression vectors including said polynucleotides, cells transformed by said vectors and specific antibodies directed against said polypeptides. The invention also concerns a method for enzymatic synthesis of deoxyribonucleosides.
    Type: Application
    Filed: August 25, 2009
    Publication date: January 21, 2010
    Applicants: INSTITUT PASTEUR, Institut National de la Recherche Agronomique
    Inventors: Pierre-Alexandre Kaminski, Patrick Tailliez, Philippe Marliere, Pascal Quenee, Rachel Cotaya
  • Patent number: 7547513
    Abstract: The invention relates to a method for artificial in vivo evolution of proteins, said method making it possible to bring about the evolution of a protein X by complementation of a relative protein Y, X and Y both belonging to the same class of enzyme commission (EC) nomenclature or belonging to related classes. The mutants D133E and R104Q of desoxycytidine kinase (DCK) were obtained; both of said mutations result in acquisition of thymidine kinase activity by DCK.
    Type: Grant
    Filed: May 19, 2005
    Date of Patent: June 16, 2009
    Assignees: Institut Pasteur, Centre National de la Recherche Scientifique (CNRS)
    Inventors: Philippe Marliere, Sylvie Pochet, Madeleine Bouzon
  • Patent number: 7524646
    Abstract: The present invention is directed to a method to diversify the chemical composition of proteins produced in vivo comprising the step of disabling, particularly by mutagenesis, the editing function of one of its aminoacyl tRNA synthetases. The present invention is also directed to nucleic acid sequences encoding such mutated aminoacyl tRNA synthetases having their editing site mutated and capable of mischarging its cognate tRNA with a noncanonical amino acid. Also described herein is an improved method for obtaining transformed cells capable of synthetizing in vivo proteins comprising at least a noncanonical amino acid and their use for the production of such proteins.
    Type: Grant
    Filed: February 8, 2005
    Date of Patent: April 28, 2009
    Assignees: Institut Pasteur, The Scripps Research Institute, Evologic GmbH
    Inventors: Volker Doring, Leslie A. Nangle, Tamara L. Hendrickson, Valerie De Crecy-Lagard, Paul Schimmel, Philippe Marliere