Patents by Inventor Philippe Soucaille

Philippe Soucaille has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20100086982
    Abstract: The present invention provides a method for the biological production of n-butanol at high yield from a fermentable carbon source. In one aspect of the present invention, a process for the conversion of glucose to n-butanol is achieved by the use of a recombinant organism comprising a host C. acetobutilicum transformed i) to eliminate the butyrate pathway ii) to eliminate the acetone pathway iii) to eliminate the lactate pathway and iv) to eliminate the acetate pathway. In another aspect of the present invention, the hydrogen flux is decreased and the reducing power redirected to n-butanol production by attenuating the expression of the hydrogenase gene. Optionally the n-butanol produced can be eliminated during the fermentation by gas striping and further purified by distillation.
    Type: Application
    Filed: October 29, 2007
    Publication date: April 8, 2010
    Applicant: METABOLIC EXPLORER
    Inventor: Philippe Soucaille
  • Publication number: 20100047879
    Abstract: The present invention relates to a method for the production of methionine or its derivatives by culturing a microorganism in an appropriate culture medium comprising a source of carbon and a source of sulphur. The microorganism and/or the culture medium and/or the process parameters were modified in a way that the accumulation of the by-product N-acyl-methionine (NAM) is reduced. The isolation of methionine or its derivatives from the fermentation medium is also claimed.
    Type: Application
    Filed: February 12, 2009
    Publication date: February 25, 2010
    Inventors: Rainer Figge, Philippe Soucaille, Gwenaelle Bestel-Corre
  • Publication number: 20090325245
    Abstract: The present invention provides a bacterium and a method for the biological production of ethanolamine from a fermentable carbon source. In one aspect of the present invention, a process for the conversion of glucose to ethanolamine is achieved by the use of a recombinant bacterium transformed i) to express a serine decarboxylase enzyme to convert serine to ethanolamine ii) to inactivate the ethanolamine consuming pathways and iii) to increase 3-phosphoglycerate availability. In another aspect of the present invention, the process for the production of ethanolamine from glucose using a recombinant E. coli is improved by i) increasing the flux in the serine pathway and ii) decreasing the flux in the serine consuming pathways.
    Type: Application
    Filed: June 12, 2007
    Publication date: December 31, 2009
    Inventors: Philippe Soucaille, Rainer Figge
  • Publication number: 20090156430
    Abstract: This invention provides a series of low-copy number plasmids comprising restriction endonuclease recognition sites useful for cloning at least three different genes or operons, each flanked by a terminator sequence, the plasmids containing variants of glucose isomerase promoters for varying levels of protein expression. The materials and methods are useful for genetic engineering in microorganisms, especially where multiple genetic insertions are sought.
    Type: Application
    Filed: February 13, 2009
    Publication date: June 18, 2009
    Applicant: E. I. DU PONT DE NEMOURS AND COMPANY
    Inventors: Mark S. Payne, Stephen K. Picataggio, Amy Kuang-Hua Hsu, Ramesh V. Nair, Fernando Valle, Philippe Soucaille, Donald E. Trimbur
  • Publication number: 20090155867
    Abstract: The present invention provides a method for the biological production of glycolic acid from a fermentable carbon source in a microorganism. In one aspect of the present invention, a process for the conversion of glucose to glycolic acid is achieved by the use of a recombinant organism comprising a host E. coli transformed i) to attenuate the glyoxylate consuming pathways to other compounds than glycolate ii) to use an NADPH glyoxylate reductase to convert glyoxylate to glycolate iii) to attenuate the level of all the glycolate metabolizing enzymes and iv) increase the flux in the glyoxylate pathway. In another aspect of the present invention, the process for the production of glycolic acid from a fermentable carbon source, using a recombinant E. coli, is improved by increasing the NADPH availability in the cells.
    Type: Application
    Filed: June 7, 2007
    Publication date: June 18, 2009
    Inventor: Philippe Soucaille
  • Publication number: 20090142843
    Abstract: A method is disclosed for restoring a Glu+ phenotype to a PTS?/Glu? bacterial cell which was originally capable of utilizing a phosphotransferase transport system (PTS) for carbohydrate transport. Bacterial cells comprising the Glu+ phenotype have modified endogenous chromosomal regulatory regions which are operably linked to polynucleotides encoding galactose permeases and glucokinases.
    Type: Application
    Filed: January 9, 2008
    Publication date: June 4, 2009
    Inventors: Marguerite A. Cervin, Philippe Soucaille, Fernando Valle, Gregory M. Whited
  • Patent number: 7510869
    Abstract: This invention provides a series of low-copy number plasmids comprising restriction endonuclease recognition sites useful for cloning at least three different genes or operons, each flanked by a terminator sequence, the plasmids containing variants of glucose isomerase promoters for varying levels of protein expression. The materials and methods are useful for genetic engineering in microorganisms, especially where multiple genetic insertions are sought.
    Type: Grant
    Filed: October 2, 2006
    Date of Patent: March 31, 2009
    Assignee: E.I. du Pont de Nemours and Company
    Inventors: Mark S. Payne, Stephen K. Picataggio, Amy Kuang-Hsu, Ramesh Velayudhan Nair, Fernado Valle, Philippe Soucaille, Donald Eugene Trimbur
  • Publication number: 20090075347
    Abstract: The present invention provides methods to enhance production of desired products and increase the growth rate of a bacterial strain by inactivating an endogenous arcA and optionally overexpressing a ppc gene.
    Type: Application
    Filed: July 11, 2008
    Publication date: March 19, 2009
    Inventors: Marguerite A. Cervin, Philippe Soucaille, Donald E. Trimbur, Fernando Valle
  • Publication number: 20090029431
    Abstract: The invention concerns a method for preparing 1,3-propanediol from a carbon-containing substance, said method comprising a step which consists in culturing a recombinant micro-organism not producing coenzyme B12 in the absence of coenzyme B12 or one of its precursors. The invention also concerns a nucleic acid coding for a glycerol dehydratase whereof the catalytic activity is independent of the presence of coenzyme B12 or one of its precursors and a nucleic acid coding for a 1,3-propanol dehydrogenase intervening in the synthesis of 1,3-propanediol. The invention further concerns recombinant vectors and host cells comprising said nucleic acids and the polypeptides coded by the latter.
    Type: Application
    Filed: August 15, 2007
    Publication date: January 29, 2009
    Inventors: Patricia Sarcabal, Christian Croux, Philippe Soucaille
  • Publication number: 20090029424
    Abstract: The present invention relates to the use of recombinant homoserine transsuccinylase enzymes with altered feedback sensitivity (MetA*) and possibly recombinant S-adenosyl methionine synthetase enzymes with reduced activity (MetK*) for the production of methionine, its precursors or derivatives thereof.
    Type: Application
    Filed: May 12, 2005
    Publication date: January 29, 2009
    Applicant: Metabolic Explorer
    Inventors: Gwenaelle Bestel-Corre, Michel Chateau, Rainer Figge, Celine Raynaud, Philippe Soucaille
  • Publication number: 20080311632
    Abstract: A method of producing methionine, derivatives or precursors thereof comprising culturing a microorganism modified to enhance production of cysteine in a culture medium comprising a source of carbon and a source of sulfur and recovering methionine from the culture medium. A microorganism for fermentative production of methionine or its derivatives in which production of methionine or derivatives thereof, wherein the microorganism enhances production of cysteine.
    Type: Application
    Filed: January 4, 2006
    Publication date: December 18, 2008
    Inventors: Rainer Figge, Fabien Lux, Celine Raynaud, Michel Chateau, Philippe Soucaille
  • Publication number: 20080286840
    Abstract: A microorganism in which enzymes are expressed that have one or several of the following activities cystathionine-?-synthases and/or phosphohomoserine sulfhydrylase and/or acylhomoserine sulfhydrylases and that have at the same time low ?-elimination activity is disclosed and also relates to recombinant enzymes that have one or several of the following activities cystathionine-?-synthase and/or phosphohomoserine and/or acylhomoserine sulfhydrylase, have at the same time low ?-eliminase activity and are used for the fermentative production of amino acids, in particular, methionine.
    Type: Application
    Filed: February 7, 2006
    Publication date: November 20, 2008
    Inventors: Rainer Figge, Gwenaelle Bestel-Corre, Philippe Soucaille
  • Publication number: 20080233617
    Abstract: The present invention relates to increasing the product of aspartate or aspartate-derived metabolites by boosting the activity of the glyoxylate shunt. This is accomplished by increasing the activity of glyoxylate shunt specific enzymes and decreasing the activity of reactions consuming glyoxylate and its precursors.
    Type: Application
    Filed: August 11, 2006
    Publication date: September 25, 2008
    Inventors: Rainer Figge, Gwenaelle Bestel-Corre, Celine Raynaud, Philippe Soucaille
  • Publication number: 20080176302
    Abstract: The present invention provides a microorganism useful for biologically producing 1,3-propanediol from a fermentable carbon source at higher yield than was previously known. The complexity of the cofactor requirements necessitates the use of a whole cell catalyst for an industrial process that utilizes this reaction sequence to produce 1,3-propanediol. The invention provides a microorganism with disruptions in specified genes and alterations in the expression levels of specified genes that is useful in a higher yielding process to produce 1,3-propanediol.
    Type: Application
    Filed: March 24, 2008
    Publication date: July 24, 2008
    Applicant: E.I. duPont de Nemours and Company
    Inventors: MARGUERITE A. CERVIN, Philippe Soucaille, Fernando Valle
  • Publication number: 20080085558
    Abstract: The present invention is related to a new method for replacing or deleting DNA sequences in Clostridia, with high efficiency, easy to perform and applicable at an industrial level. This method is useful to modify several genetic loci in Clostridia in a routine manner. This method is based on a replicative vector carrying at least two marker genes.
    Type: Application
    Filed: April 18, 2007
    Publication date: April 10, 2008
    Inventors: Philippe Soucaille, Rainer Figge, Christian Croux
  • Publication number: 20080076678
    Abstract: The present invention relates to a method of creating DNA libraries that include an artificial promoter library and/or a modified ribosome binding site library and transforming bacterial host cells with the library to obtain a population of bacterial clones having a range of expression levels for a chromosomal gene of interest.
    Type: Application
    Filed: November 19, 2007
    Publication date: March 27, 2008
    Inventors: Philippe SOUCAILLE, Marguerite CERVIN, Fernando VALLE
  • Patent number: 7267972
    Abstract: The invention concerns a method for preparing 1,3-propanediol from a carbon-containing substance, said method comprising a step which consists in culturing a recombinant micro-organism not producing coenzyme B12 in the absence of coenzyme B12 or one of its precursors. The invention also concerns a nucleic acid coding for a glycerol dehydratase whereof the catalytic activity is independent of the presence of coenzyme B12 or one of its precursors and a nucleic acid coding for a 1,3-propanol dehydrogenase intervening in the synthesis of 1,3-propanediol. The invention further concerns recombinant vectors and host cells comprising said nucleic acids and the polypeptides coded by the latter.
    Type: Grant
    Filed: January 9, 2002
    Date of Patent: September 11, 2007
    Assignee: Institut National de la Recherche
    Inventors: Patricia Sarcabal, Christian Croux, Philippe Soucaille
  • Publication number: 20070087403
    Abstract: The invention relates to optimised micro-organism strains for the biotransformation production of molecules having NADPH-consuming biosynthetic pathways. The inventive strains can be used in NADPH-consuming biotransformation methods. Said strains are characterised in that one or more NADPH-oxidising activities are limited.
    Type: Application
    Filed: November 5, 2004
    Publication date: April 19, 2007
    Inventors: Gwénaëlle Bestel-Corre, Cedric Boisart, Michel Chateau, Benjamin Gonzalez, Philippe Soucaille, Rainer Figge, Olivier Zink
  • Publication number: 20070072279
    Abstract: The present invention concerns a new method of preparation of a strain of evolved micro-organisms for the production of 1,2-propanediol by the metabolism of a simple carbon source, which method comprises the growth under selection pressure in an appropriate growth medium containing a simple carbon source of an initial bacterial strain that has undergone the deletion of the gene tpiA and the deletion of at least one gene involved in the conversion of methylglyoxal (propanal) into lactate, in order to cause, in said initial strain, the evolution of one or more genes involved in the biosynthesis pathway from DHAP to methylglyoxal and then to 1,2-propanediol towards evolved genes that possess an improved “1,2-propanediol synthase activity”, the resulting strain or strains of evolved micro-organisms possessing an improved “1,2-propanediol synthase activity” then being selected and isolated.
    Type: Application
    Filed: January 12, 2005
    Publication date: March 29, 2007
    Inventors: Isabelle Meynial-Salles, Benjamin Gonzalez, Philippe Soucaille
  • Publication number: 20070065867
    Abstract: This invention provides a series of low-copy number plasmids comprising restriction endonuclease recognition sites useful for cloning at least three different genes or operons, each flanked by a terminator sequence, the plasmids containing variants of glucose isomerase promoters for varying levels of protein expression. The materials and methods are useful for genetic engineering in microorganisms, especially where multiple genetic insertions are sought.
    Type: Application
    Filed: October 2, 2006
    Publication date: March 22, 2007
    Inventors: Mark Payne, Stephen Picataggio, Amy Hsu, Ramesh Nair, Fernado Valle, Philippe Soucaille, Donald Trimbur