Patents by Inventor Richard D. Shippy

Richard D. Shippy has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Differential filtering of genetic data
    Patent number: 10872681
    Abstract: Computer software products, methods, and systems are described which provide functionality to a user conducting experiments designed to detect and/or identify genetic sequences and other characteristics of a genetic sample, such as, for instance, gene copy number and aberrations thereof. The presently described software allows the user to interact with a graphical user interface which depicts the genetic information obtained from the experiment. The presently disclosed methods and software are related to bioinformatics and biological data analysis. Specifically, provided are methods, computer software products and systems for analyzing and visually depicting genotyping data on a screen or other visual projection. The presently disclosed methods and software allow the user conducting the experiment to differentially filter complex genetic data and information by varying genetic parameters and removing or highlighting visually various regions of genetic data of interest (CytoRegions).
    Type: Grant
    Filed: September 22, 2017
    Date of Patent: December 22, 2020
    Assignee: Affymetrix, Inc.
    Inventors: Carl A. Dowds, Jody C. McIntyre, Edgar E. Erwin, Garret D. Wilson, Pragna B. Parmar, Breck S. Ohlson, Richard D. Shippy, Francisco J. Cifuentes
  • DIFFERENTIAL FILTERING OF GENETIC DATA
    Publication number: 20180011970
    Abstract: Computer software products, methods, and systems are described which provide functionality to a user conducting experiments designed to detect and/or identify genetic sequences and other characteristics of a genetic sample, such as, for instance, gene copy number and aberrations thereof. The presently described software allows the user to interact with a graphical user interface which depicts the genetic information obtained from the experiment. The presently disclosed methods and software are related to bioinformatics and biological data analysis. Specifically, provided are methods, computer software products and systems for analyzing and visually depicting genotyping data on a screen or other visual projection. The presently disclosed methods and software allow the user conducting the experiment to differentially filter complex genetic data and information by varying genetic parameters and removing or highlighting visually various regions of genetic data of interest (CytoRegions).
    Type: Application
    Filed: September 22, 2017
    Publication date: January 11, 2018
    Applicant: Affymetrix, Inc.
    Inventors: Carl A. Dowds, Jody C. Courtney, Edgar E. Erwin, Garret D. Wilson, Pragna B. Parmar, Breck S. Ohlson, Richard D. Shippy, Francisco J. Cifuentes
  • Differential filtering of genetic data
    Patent number: 9798855
    Abstract: Computer software products, methods, and systems are described which provide functionality to a user conducting experiments designed to detect and/or identify genetic sequences and other characteristics of a genetic sample, such as, for instance, gene copy number and aberrations thereof. The presently described software allows the user to interact with a graphical user interface which depicts the genetic information obtained from the experiment. The presently disclosed methods and software are related to bioinformatics and biological data analysis. Specifically, provided are methods, computer software products and systems for analyzing and visually depicting genotyping data on a screen or other visual projection. The presently disclosed methods and software allow the user conducting the experiment to differentially filter complex genetic data and information by varying genetic parameters and removing or highlighting visually various regions of genetic data of interest (CytoRegions).
    Type: Grant
    Filed: January 7, 2011
    Date of Patent: October 24, 2017
    Assignee: Affymetrix, Inc.
    Inventors: Carl A. Dowds, Jody C. McIntyre, Edgar E. Erwin, Garret D. Wilson, Pragna B. Parmar, Breck S. Ohlson, Richard D. Shippy, Francisco J. Cifuentes
  • Differential Filtering of Genetic Data
    Publication number: 20110257896
    Abstract: Computer software products, methods, and systems are described which provide functionality to a user conducting experiments designed to detect and/or identify genetic sequences and other characteristics of a genetic sample, such as, for instance, gene copy number and aberrations thereof. The presently described software allows the user to interact with a graphical user interface which depicts the genetic information obtained from the experiment. The presently disclosed methods and software are related to bioinformatics and biological data analysis. Specifically, provided are methods, computer software products and systems for analyzing and visually depicting genotyping data on a screen or other visual projection. The presently disclosed methods and software allow the user conducting the experiment to differentially filter complex genetic data and information by varying genetic parameters and removing or highlighting visually various regions of genetic data of interest (CytoRegions).
    Type: Application
    Filed: January 7, 2011
    Publication date: October 20, 2011
    Applicant: AFFYMETRIX, INC.
    Inventors: Carl A. Dowds, Jody C. McIntyre, Edgar E. Erwin, Garret D. Wilson, Pragna B. Parmar, Breck S. Ohlson, Richard D. Shippy, Francisco J. Cifuentes
  • Ratio-based oligonucleotide probe selection
    Patent number: 7552013
    Abstract: Disclosed herein are methods of selecting probes to target nucleic acid sequences, methods of making oligonucleotide arrays comprising such probes, and methods of using such arrays. Also, described herein are oligonucleotide arrays comprising probes selected by a method of the invention.
    Type: Grant
    Filed: March 15, 2006
    Date of Patent: June 23, 2009
    Assignee: GE Healthcare Bio-Sciences AB
    Inventors: David Dorris, Abhijit Mazumder, Richard D. Shippy
  • Ratio-based oligonucleotide probe selection
    Patent number: 7047141
    Abstract: Disclosed herein are methods of selecting probes to target nucleic acid sequences, methods of making oligonucleotide arrays comprising such probes, and methods of using such arrays. Also, described herein are oligonucleotide arrays comprising probes selected by a method of the invention.
    Type: Grant
    Filed: August 2, 2001
    Date of Patent: May 16, 2006
    Assignee: GE Healthcare Bio-Sciences AB
    Inventors: David Dorris, Abhijit Mazumder, Richard D. Shippy
  • Ratio-based oligonucleotide probe selection
    Publication number: 20030027149
    Abstract: Disclosed herein are methods of selecting probes to target nucleic acid sequences, methods of making oligonucleotide arrays comprising such probes, and methods of using such arrays. Also, described herein are oligonucleotide arrays comprising probes selected by a method of the invention.
    Type: Application
    Filed: August 2, 2001
    Publication date: February 6, 2003
    Inventors: David Dorris, Abhijit Mazumder, Richard D. Shippy