Patents by Inventor Ron T. Shigeta

Ron T. Shigeta has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20040049354
    Abstract: A system for analyzing alternative splice variant sequences is described, comprising an input manager for receiving alternative splice variant sequences that are identified by one or more probe sets, a correlator that correlates functional domains with each of the alternative splice variant sequences and an associater that associates putative functions with the alternative splice variant sequences based upon a combination of the functional domains. A method for analyzing alternative splice variant sequences is also described, comprising the acts of receiving alternative splice variant sequences that are identified by one or more probe sets, correlating functional domains with the alternative splice variant sequences and associating putative functions with the alternative splice variant sequences based upon a combination of the functional domains.
    Type: Application
    Filed: April 25, 2003
    Publication date: March 11, 2004
    Applicants: Affymetrix, Inc., a Corporation Organized under the laws of Delaware
    Inventors: Ann Loraine, Melissa Cline, Gregg A. Helt, Michael A. Siani-Rose, David C. Kulp, Ron T. Shigeta
  • Publication number: 20020183936
    Abstract: A genomic portal system receives from a user a selection of one or more probe-set identifiers associated with one or more probe sets. The probe-set identifiers may be submitted in a batch file and may include one or more annotation terms. The system also correlates the user-selected probe-set identifiers with one or more biological sequences, and correlates the one or more biological sequences with a first set of probe sets. A network server identifies the first set of probe sets to the user. The genomic portal system may also receive from a user a selection of one or more probe-set identifiers associated with one or more probe sets, wherein the probe-set identifiers include one or more biological sequences. The system periodically update one or more local genomic databases, clusters the one or more biological sequences based on the local genomic databases, and provide the clustered data to a user.
    Type: Application
    Filed: May 2, 2002
    Publication date: December 5, 2002
    Applicant: Affymetrix, Inc.
    Inventors: David C. Kulp, Michael A. Siani-Rose, Shaw Sun, Ron T. Shigeta, Guoying Liu, Stephen Chervitz Trutane
  • Publication number: 20020164709
    Abstract: The present invention provides a novel growth factor polynucleotide, growth factor polypeptide, gene delivery vehicles comprising and/or expressing the growth factor polynucleotide, antibodies and fragments capable of specifically binding to the growth factor polypeptide, receptors of the growth factor polypeptide, modulators of the growth factor activity, and modulators of growth factor expression. Also provided by the invention are host cells and transgenic organisms comprising the gene delivery vehicle of the present invention. Also provided by the invention are computer readable media containing the polynucleotide or polypeptide sequences of the present invention. Further provided are methods of using these compositions for diagnosis and treatment of growth factor associated diseases.
    Type: Application
    Filed: February 26, 2002
    Publication date: November 7, 2002
    Applicant: Affymetrix, INC. A corporation organized under the laws of Delaware
    Inventors: Ron T. Shigeta, Michael A. Siani-Rose
  • Publication number: 20020123083
    Abstract: The present invention provides a novel growth factor polynucleotide, growth factor polypeptide, gene delivery vehicles comprising and/or expressing the growth factor polynucleotide, antibodies and fragments capable of specifically binding to the growth factor polypeptide, receptors of the growth factor polypeptide, modulators of the growth factor activity, and modulators of growth factor expression. Also provided by the invention are host cells and transgenic organisms comprising the gene delivery vehicle of the present invention. Also provided by the invention are computer readable media containing the polynucleotide or polypeptide sequences of the present invention. Further provided are methods of using these compositions for diagnosis and treatment of growth factor associated diseases.
    Type: Application
    Filed: February 26, 2002
    Publication date: September 5, 2002
    Applicant: Affymetrix, INC.
    Inventors: Ron T. Shigeta, Michael A. Siani-Rose