Patents by Inventor Ruedi Aebersold

Ruedi Aebersold has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 7052915
    Abstract: A method for selective labeling of phosphate groups in natural and synthetic oligomers and polymers in the presence of chemically related groups such as carboxylic acid groups. The method is specifically applicable to biological oligomers and polymers, including phosphopeptides, phosphoproteins and phospholipids. In a specific embodiment, selective labeling of phosphate groups in proteins and peptides, for example, facilitates separation, isolation and detection of phosphoproteins and phosphopeptides in complex mixtures of proteins. Selective labeling can be employed to selectively introduce phosphate labels at phosphate groups in an oligomer or polymer, e.g., in a peptide or protein. Detection of the presence of the label, is used to detect the presence of the phosphate group in the oligomer or polymer. The method is useful for the detection of phosphoproteins or phosphopeptides.
    Type: Grant
    Filed: June 12, 2001
    Date of Patent: May 30, 2006
    Assignee: University of Washington
    Inventors: Ruedi Aebersold, Huilin Zhou
  • Patent number: 6629040
    Abstract: The present invention provides methods and reagents for identifying specific masses of compounds in a complex mixture. In particular, the present invention describes an isotope distribution encoded tag (IDEnT) concept wherein the ability to distinguish an analyte encoded with a non-native isotope from those not encoded with the isotope or from those encoded with a different isotope is used for protein identification, enzyme active site identification, peptide sequencing, and the like. Reagents used in the IDEnT strategy consist of a chemical element with a unique isotope distribution not normally found in the analyte class being studied, chemically bonded to, or an integral part of a chemical reagent with a high selectivity of affinity for specific functional group in the analyte.
    Type: Grant
    Filed: March 20, 2000
    Date of Patent: September 30, 2003
    Assignees: University of Washington, Battelle Memorial Institute
    Inventors: David R. Goodlett, James E. Bruce, Beate Rist, Richard D. Smith, Ruedi Aebersold
  • Patent number: 6576896
    Abstract: The present invention provides a electroosmotic fluidic device and method for delivering analytes to an analyzer to obtain structural information for the analyte. The device and method are useful in identifying proteins by mass spectrometry.
    Type: Grant
    Filed: January 23, 2002
    Date of Patent: June 10, 2003
    Assignee: University of Washington
    Inventors: Daniel Figeys, Ruedi Aebersold
  • Publication number: 20030047680
    Abstract: The present invention provides a electroosmotic fluidic device and method for delivering analytes to an analyzer to obtain structural information for the analyte. The device and method are useful in identifying proteins by mass spectrometry.
    Type: Application
    Filed: January 23, 2002
    Publication date: March 13, 2003
    Applicant: University of Washington
    Inventors: Daniel Figeys, Ruedi Aebersold
  • Publication number: 20020049307
    Abstract: A method for selective labeling of phosphate groups in natural and synthetic oligomers and polymers in the presence of chemically related groups such as carboxylic acid groups. The method is specifically applicable to biological oligomers and polymers, including phosphopeptides, phosphoproteins and phospholipids. In a specific embodiment, selective labeling of phosphate groups in proteins and peptides, for example, facilitates separation, isolation and detection of phosphoproteins and phosphopeptides in complex mixtures of proteins. Selective labeling can be employed to selectively introduce phosphate labels at phosphate groups in an oligomer or polymer, e.g., in a peptide or protein. Detection of the presence of the label, is used to detect the presence of the phosphate group in the oligomer or polymer. The method is useful for the detection of phosphoproteins or phosphopeptides.
    Type: Application
    Filed: October 18, 2001
    Publication date: April 25, 2002
    Inventors: Ruedi Aebersold, Huilin Zhou