Patents by Inventor Simon Fredriksson

Simon Fredriksson has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11628224
    Abstract: A therapeutic agent capable of binding to the receptor CLPTM1 at the surface of an immune cell and modulating its activity for use in modulating the activity of the immune system to treat cancer, wherein the therapeutic agent is capable of inhibiting the growth and/or viability of an anti-inflammatory and/or immunosuppressive cell to relieve unwanted or deleterious immunosuppression by eliminating anti-inflammatory and/or immunosuppressive immune cells; and/or the therapeutic agent is capable of stimulating an antigen-presenting immune cell and acts to stimulate antigen-presenting immune cells to activate an anti-cancer immune response.
    Type: Grant
    Filed: January 12, 2018
    Date of Patent: April 18, 2023
    Assignee: GENAGON THERAPEUTICS AB
    Inventors: Johan Erik Simon Fredriksson, Olof Andries Blokzijl
  • Publication number: 20230027467
    Abstract: Provided herein is a method for mapping rolling circle amplification (RCA) products that contain unique identifier sequences. The method generally involves (a) producing a complex comprising population of grid oligonucleotide molecules and a population of RCA products that each have a unique RCA product identifier sequence, wherein the grid oligonucleotides are hybridized directly or indirectly via a splint to complementary sites in the RCA products; (b) extending the grid oligonucleotide molecules that are hybridized to two RCA products to add the complements of the unique RCA product identifier sequences from the two RCA products to the grid oligonucleotide molecules; (c) sequencing the extended grid oligonucleotides; (d) analyzing the sequences to identify which pairs of unique RCA product identifier sequence complements have been added onto the grid oligonucleotides; and (e) making one or more physical maps of the immobilized RCA products using the pairs of sequences identified in (d).
    Type: Application
    Filed: October 27, 2020
    Publication date: January 26, 2023
    Inventor: Simon Fredriksson
  • Patent number: 11406665
    Abstract: The invention relates to apolypeptide capable of binding to TGF-? for use in treating or preventing a condition associated with elevated or unwanted levels of TGF-?, wherein said polypeptide is capable of inhibiting the interaction of TGF-? with the receptor CLPTM1.
    Type: Grant
    Filed: January 12, 2018
    Date of Patent: August 9, 2022
    Assignee: GENAGON THERAPEUTICS AB
    Inventors: Johan Erik Simon Fredriksson, Olof Andries Blokzijl
  • Patent number: 10781473
    Abstract: The present invention provides a plurality of pairs of proximity probes, each pair being capable of binding to a different target analyte, wherein the first and second proximity probes of each pair of probes comprise universal oligonucleotides conjugated to their analyte binding moieties, and hybridised to the universal oligonucleotides are different tag oligonucleotides comprising universal complement domains common to all tag oligonucleotides and unique domains unique to each tag oligonucleotide, as well as methods for their production.
    Type: Grant
    Filed: October 21, 2016
    Date of Patent: September 22, 2020
    Assignee: OLINK PROTEOMICS AB
    Inventors: Johan Erik Simon Fredriksson, Klas Martin Lundberg
  • Patent number: 10731206
    Abstract: The present invention relates to a proximity probe based detection assay (“proximity assay”) for an analyte in a sample, specifically a proximity probe extension assay (PEA), an in particular to an improvement in the method to reduce non-specific “background” signals, wherein the improvement comprises the use in such assays of a component comprising 3? exonuclease activity, said method comprising: (a) contacting said sample with at least one set of at least first and second proximity probes, which probes each comprise an analyte-binding domain and a nucleic acid domain and can simultaneously bind to the analyte; (b) allowing the nucleic acid domains of the proximity probes to interact with each other upon binding of said proximity probes to said analyte, wherein said interaction comprises the formation of a duplex; (c) contacting said sample with a component comprising 3? exonuclease activity; (d) extending the 3? end of at least one nucleic acid domain of said duplex to generate an extension product, wherein
    Type: Grant
    Filed: September 1, 2017
    Date of Patent: August 4, 2020
    Assignee: OLINK PROTEOMICS AB
    Inventors: Simon Fredriksson, Martin Lundberg, Anna Larsson, Emma Rennel-Dickens
  • Publication number: 20190343962
    Abstract: A therapeutic agent capable of binding to the receptor CLPTM1 at the surface of an immune cell and modulating its activity for use in modulating the activity of the immune system to treat cancer, wherein the therapeutic agent is capable of inhibiting the growth and/or viability of an anti-inflammatory and/or immunosuppressive cell to relieve unwanted or deleterious immunosuppression by eliminating anti-inflammatory and/or immunosuppressive immune cells; and/or the therapeutic agent is capable of stimulating an antigen-presenting immune cell and acts to stimulate antigen-presenting immune cells to activate an anti-cancer immune response.
    Type: Application
    Filed: January 12, 2018
    Publication date: November 14, 2019
    Inventors: Johan Erik Simon FREDRIKSSON, Olof Andries BLOKZIJL
  • Publication number: 20190328788
    Abstract: The invention relates to apolypeptide capable of binding to TGF-? for use in treating or preventing a condition associated with elevated or unwanted levels of TGF-?, wherein said polypeptide is capable of inhibiting the interaction of TGF-? with the receptor CLPTM1.
    Type: Application
    Filed: January 12, 2018
    Publication date: October 31, 2019
    Inventors: Johan Erik Simon FREDRIKSSON, Olof Andries BLOKZIJL
  • Publication number: 20190256592
    Abstract: The present invention providesabinding agent capable of binding to the extracellular domain of CLPTM1 for use in the treatment or prevention of a condition which is responsive to, or benefits from, (i) immunosuppression, (ii) the reduction or reversal of one or more pro-inflammatory cytokines or the induction of an anti-inflammatory cytokine), (iii) an increase in insulin sensitivity, or (iv) therapy with GDF15 and/or TGF-? and/or IFN?, wherein said binding agent has an EC 50 value of 1 ?g/ml or less when determined by measuring binding to membrane-permeabilised O-876 cells expressing native CLPTM1 by flow cytometry, and wherein said binding agent is not a natural ligand for CLPTM.
    Type: Application
    Filed: September 15, 2017
    Publication date: August 22, 2019
    Inventors: Olof Andries BLOKZIJL, Johan Erik Simon FREDRIKSSON
  • Publication number: 20180312901
    Abstract: The present invention provides a plurality of pairs of proximity probes, each pair being capable of binding to a different target analyte, wherein the first and second proximity probes of each pair of probes comprise universal oligonucleotides conjugated to their analyte binding moieties, and hybridised to the universal oligonucleotides are different tag oligonucleotides comprising universal complement domains common to all tag oligonucleotides and unique domains unique to each tag oligonucleotide, as well as methods for their production.
    Type: Application
    Filed: October 21, 2016
    Publication date: November 1, 2018
    Inventors: Johan Erik Simon FREDRIKSSON, Klas Martin LUNDBERG
  • Publication number: 20180282403
    Abstract: The present invention relates to agents for reducing the activity of GDF15 and in particular the use of such agents to treat or prevent conditions associated with elevated or unwanted levels of GDF15. The invention is based on the discovery that GDF15 binds to the receptors CLPTM1 and QRFPR and provides agents for such use in the form of binding agents capable of binding to the receptors and inhibiting the interaction between GDF15 and the receptor. Further agents include polypeptides derived from the receptors which are capable of binding to GDF15 and inhibiting its interaction with the receptors. Also provided are diagnostic methods based on detecting the interaction or an effect thereof, and cytotoxic immune cells modified to have a reduced level and/or activity of CLPTM1.
    Type: Application
    Filed: July 20, 2016
    Publication date: October 4, 2018
    Inventors: Olof Andries BLOKZIJL, Johan Erik Simon FREDRIKSSON
  • Publication number: 20180100189
    Abstract: The present invention relates to a proximity probe based detection assay (“proximity assay”) for an analyte in a sample, specifically a proximity probe extension assay (PEA), an in particular to an improvement in the method to reduce non-specific “background” signals, wherein the improvement comprises the use in such assays of a component comprising 3? exonuclease activity, said method comprising: (a) contacting said sample with at least one set of at least first and second proximity probes, which probes each comprise an analyte-binding domain and a nucleic acid domain and can simultaneously bind to the analyte; (b) allowing the nucleic acid domains of the proximity probes to interact with each other upon binding of said proximity probes to said analyte, wherein said interaction comprises the formation of a duplex; (c) contacting said sample with a component comprising 3? exonuclease activity; (d) extending the 3? end of at least one nucleic acid domain of said duplex to generate an extension product, wherein
    Type: Application
    Filed: September 1, 2017
    Publication date: April 12, 2018
    Inventors: Simon FREDRIKSSON, Martin LUNDBERG, Anna ERIKSSON, Emma RENNEL-DICKENS
  • Patent number: 9902993
    Abstract: The present invention relates to a proximity probe based detection assay (“proximity assay”) for an analyte in a sample, specifically a proximity probe extension assay (PEA), an in particular to an improvement in the method to reduce non-specific “background” signals, wherein the improvement comprises the use in such assays of a hyperthermophilic polymerase, said method comprising: (a) contacting said sample with at least one set of at least first and second proximity probes, which probes each comprise an analyte-binding domain and a nucleic acid domain and can simultaneously bind to the analyte; (b) allowing the nucleic acid domains of the proximity probes to interact with each other upon binding of said proximity probes to said analyte, wherein said interaction comprises the formation of a duplex; (c) extending the 3? end of at least one nucleic acid domain of said duplex to generate an extension product, wherein the extension reaction comprises increasing the temperature of assay above room temperature and
    Type: Grant
    Filed: January 29, 2013
    Date of Patent: February 27, 2018
    Assignee: OLINK PROTEOMICS AB
    Inventors: Simon Fredriksson, Martin Lundberg, Anna Eriksson, Emma Rennel-Dickens
  • Patent number: 9777315
    Abstract: The present invention relates to a proximity probe based detection assay (“proximity assay”) for an analyte in a sample, specifically a proximity probe extension assay (PEA), an in particular to an improvement in the method to reduce non-specific “background” signals, wherein the improvement comprises the use in such assays of a component comprising 3? exonuclease activity, said method comprising: (a) contacting said sample with at least one set of at least first and second proximity probes, which probes each comprise an analyte-binding domain and a nucleic acid domain and can simultaneously bind to the analyte; (b) allowing the nucleic acid domains of the proximity probes to interact with each other upon binding of said proximity probes to said analyte, wherein said interaction comprises the formation of a duplex; (c) contacting said sample with a component comprising 3? exonuclease activity; (d) extending the 3? end of at least one nucleic acid domain of said duplex to generate an extension product, wherein
    Type: Grant
    Filed: January 30, 2012
    Date of Patent: October 3, 2017
    Assignee: OLINK PROTEOMICS AB
    Inventors: Simon Fredriksson, Martin Lundberg, Anna Eriksson, Emma Rennel-Dickens
  • Patent number: 9677131
    Abstract: The present invention relates to the use of a conjugate of a non-analyte-specific binding protein coupled to a nucleic acid as a blocking reagent in a probe-based detection assay, which uses a probe comprising a proteinaceous analyte-binding partner coupled to a nucleic acid domain to detect an analyte in a sample.
    Type: Grant
    Filed: July 13, 2011
    Date of Patent: June 13, 2017
    Assignee: OLINK PROTEOMICS AB
    Inventors: Simon Fredriksson, Bonnie Tran
  • Patent number: 9657339
    Abstract: A method for amplifying a target nucleic acid is disclosed, which includes: (a) fragmenting a nucleic acid sample to create a target fragment comprising a target nucleic acid and two probe-complementary portions; (b) contacting said fragmented nucleic acid sample with a probe comprising two target fragment-complementary portions complementary to the probe-complementary portions of the target fragment; (c) rendering the fragmented nucleic acid sample single-stranded; (d) allowing the probe-complementary portions to hybridise with the target-fragment complementary portions; (e) if the probe in step (b) is not immobilised, immobilising the probe-target fragment hybrid on a solid phase via immobilisation moiety; (f) separating non-immobilised nucleic acid fragments from the solid phase; (g) contacting the solid phase with a ligase to ligate ligatable 5? and 3? ends of the target fragment whereby the target fragment is circularized; and (h) amplifying said circularized target fragment.
    Type: Grant
    Filed: December 3, 2010
    Date of Patent: May 23, 2017
    Assignee: Agilent Technologies, Inc.
    Inventors: Fredrik Roos, Henrik Johansson, Magnus Isaksson, Mats Nilsson, Olle (Olof) Ericsson, Simon Fredriksson
  • Publication number: 20150044674
    Abstract: The present invention relates to a proximity probe based detection assay (“proximity assay”) for an analyte in a sample, specifically a proximity probe extension assay (PEA), an in particular to an improvement in the method to reduce non-specific “background” signals, wherein the improvement comprises the use in such assays of a hyperthermophilic polymerase, said method comprising: (a) contacting said sample with at least one set of at least first and second proximity probes, which probes each comprise an analyte-binding domain and a nucleic acid domain and can simultaneously bind to the analyte; (b) allowing the nucleic acid domains of the proximity probes to interact with each other upon binding of said proximity probes to said analyte, wherein said interaction comprises the formation of a duplex; (c) extending the 3? end of at least one nucleic acid domain of said duplex to generate an extension product, wherein the extension reaction comprises increasing the temperature of assay above room temperature and
    Type: Application
    Filed: January 29, 2013
    Publication date: February 12, 2015
    Applicant: Olink AB
    Inventors: Simon Fredriksson, Martin Lundberg, Anna Eriksson, Emma Rennel-Dickens
  • Publication number: 20140106361
    Abstract: Methods and compositions for detecting an analyte in a sample are provided. In practicing the subject methods, a sample is combined with at least a pair of proximity probes that each include an analyte binding domain and a nucleic acid domain. The resultant mixture is then contacted with a pair of asymmetric nucleic acid connectors. Proximity dependent connector mediated interaction between the nucleic acid domains of the proximity probes is then detected to determine the presence of the analyte in the sample. Also provided are kits and systems for practicing the subject methods.
    Type: Application
    Filed: November 11, 2013
    Publication date: April 17, 2014
    Inventors: Simon Fredriksson, Ronald W. Davis
  • Publication number: 20140030721
    Abstract: The present invention relates to a proximity probe based detection assay (“proximity assay”) for an analyte in a sample, specifically a proximity probe extension assay (PEA), an in particular to an improvement in the method to reduce non-specific “background” signals, wherein the improvement comprises the use in such assays of a component comprising 3? exonuclease activity, said method comprising: (a) contacting said sample with at least one set of at least first and second proximity probes, which probes each comprise an analyte-binding domain and a nucleic acid domain and can simultaneously bind to the analyte; (b) allowing the nucleic acid domains of the proximity probes to interact with each other upon binding of said proximity probes to said analyte, wherein said interaction comprises the formation of a duplex; (c) contacting said sample with a component comprising 3? exonuclease activity; (d) extending the 3? end of at least one nucleic acid domain of said duplex to generate an extension product, wherein
    Type: Application
    Filed: January 30, 2012
    Publication date: January 30, 2014
    Applicant: OLINK AB
    Inventors: Simon Fredriksson, Martin Lundberg, Anna Eriksson, Emma Rennel-Dickens
  • Patent number: D870478
    Type: Grant
    Filed: April 13, 2017
    Date of Patent: December 24, 2019
    Assignee: Flexibod Limited
    Inventors: Damien Gerard Mason, James Robert Lynch, Mathew Gill Bates, Simon Fredriksson
  • Patent number: D897707
    Type: Grant
    Filed: January 24, 2018
    Date of Patent: October 6, 2020
    Assignee: Flexibod Limited
    Inventors: Damien Gerard Mason, James Robert Lynch, Mathew Gill Bates, Simon Fredriksson, Brian Joseph Garvey