Patents by Inventor Vamsee K. Pamula

Vamsee K. Pamula has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 9358551
    Abstract: The invention provides a method of redistributing magnetically responsive beads in a droplet. The method may include conducting on a droplet operations surface one or more droplet operations using the droplet without removing the magnetically responsive beads from the region of the magnetic field. The droplet operations may in some cases be electrode-mediated. The droplet operations may redistribute and/or circulate the magnetically responsive beads within the droplet. In some cases, the droplet may include a sample droplet may include a target analyte. The redistributing of the magnetically responsive beads may cause target analyte to bind to the magnetically responsive beads. In some cases, the droplet may include unbound substances in a wash buffer. The redistributing of the magnetically responsive beads causes unbound substances to be freed from interstices of an aggregated set or subset of the magnetically responsive beads.
    Type: Grant
    Filed: October 30, 2015
    Date of Patent: June 7, 2016
    Assignee: ADVANCED LIQUID LOGIC, INC.
    Inventors: Prasanna Thwar, Vamsee K. Pamula, Arjun Sudarsan, Ramakrishna Sista
  • Publication number: 20160129437
    Abstract: In one embodiment, a multiplex fluid processing cartridge includes a sample well, a deformable fluid chamber, a mixing well with a mixer disposed therein, a lysis chamber including a lysis mixer, an electrowetting grid for microdroplet manipulation, and electrosensor arrays configured to detect analytes of interest. An instrument for processing the cartridge is configured to receive the cartridge and to selectively apply thermal energy, magnetic force, and electrical connections to one or more discrete locations on the cartridge and is further configured to compress the deformable chamber(s) in a specified sequence.
    Type: Application
    Filed: November 11, 2014
    Publication date: May 12, 2016
    Applicants: ADVANCED LIQUID LOGIC, INC., GENMARK DIAGNOSTICS, INC.
    Inventors: JON FAIZ KAYYEM, SEAN FORD, VAMSEE K. PAMULA, VIJAY SRINIVASAN, SCOTT COREY, BRIAN MURPHY, DAVID WALTER WRIGHT, DOMINIC AIELLO
  • Publication number: 20160114320
    Abstract: Methods are provided for manipulating droplets. The methods include providing the droplet on a surface comprising an array of electrodes and a substantially co-planer array of reference elements, wherein the droplet is disposed on a first one of the electrodes, and the droplet at least partially overlaps a second one of the electrodes and an intervening one of the reference elements disposed between the first and second electrodes. The methods further include activating the first and second electrodes to spread at least a portion of the droplet across the second electrode and deactivating the first electrode to move the droplet from the first electrode to the second electrode.
    Type: Application
    Filed: November 9, 2015
    Publication date: April 28, 2016
    Applicant: DUKE UNIVERSITY
    Inventors: Michael G. Pollack, Vamsee K. Pamula, Richard B. Fair
  • Publication number: 20160116438
    Abstract: The invention provides a droplet actuator designed to provide reliable electrical connections to droplets to reduce or eliminate gas bubble formation during droplet operations. The invention also provides methods and systems for reducing or eliminating the formation of bubbles in a droplet during droplet operations.
    Type: Application
    Filed: June 13, 2014
    Publication date: April 28, 2016
    Applicant: Advanced Liquid Logic, Inc.
    Inventors: Vamsee K. Pamula, Vijay Srinivasan
  • Patent number: 9321049
    Abstract: A method, circuit and apparatus for detecting capacitance on a droplet actuator, inter alia, for determining the presence, partial presence or absence of a droplet at an electrode on a droplet actuator by: (a) providing a droplet actuator comprising: (i) a substrate comprising electrodes arranged on the substrate for conducting droplet operations on a surface of the substrate; (ii) a capacitance detection circuit for detecting capacitance at the droplet operations surface at one or more of the electrodes; (b) detecting capacitance at the droplet operations surface at one or more of the electrodes; and (c) determining from the capacitance the presence, partial presence or absence of a droplet at the droplet operations surface at the electrode.
    Type: Grant
    Filed: July 23, 2014
    Date of Patent: April 26, 2016
    Assignee: ADVANCED LIQUID LOGIC, INC.
    Inventors: Ryan A. Sturmer, Michael G. Pollack, Vamsee K. Pamula, Vijay Srinivasan, Philip Y. Paik
  • Publication number: 20160109338
    Abstract: The invention provides a method of circulating magnetically responsive beads within a droplet in a droplet actuator. The invention also provides methods for splitting droplets. The invention, in one embodiment, makes use of a droplet actuator with top and bottom substrates, a plurality of magnetic fields respectively present proximate the top and bottom substrates, wherein at least one of the magnet fields is selectively alterable, and a plurality of droplet operations electrodes positioned along at least one of the top and bottom surfaces. A droplet is positioned between the top and bottom surfaces and at least one of the magnetic fields is selectively altered.
    Type: Application
    Filed: December 22, 2015
    Publication date: April 21, 2016
    Applicant: Advanced Liquid Logic, Inc.
    Inventors: Ramakrishna Sista, Vamsee K. Pamula, Vijay Srinivasan, Michael G. Pollack, Allen Eckhardt
  • Publication number: 20160096174
    Abstract: A method, circuit and apparatus for detecting capacitance on a droplet actuator, inter alia, for determining the presence, partial presence or absence of a droplet at an electrode on a droplet actuator by: (a) providing a droplet actuator comprising: (i) a substrate comprising electrodes arranged on the substrate for conducting droplet operations on a surface of the substrate; (ii) a capacitance detection circuit for detecting capacitance at the droplet operations surface at one or more of the electrodes; (b) detecting capacitance at the droplet operations surface at one or more of the electrodes; and (c) determining from the capacitance the presence, partial presence or absence of a droplet at the droplet operations surface at the electrode.
    Type: Application
    Filed: December 14, 2015
    Publication date: April 7, 2016
    Applicant: Advanced Liquid Logic, Inc.
    Inventors: Ryan A. Sturmer, Michael G. Pollack, Vamsee K. Pamula, Vijay Srinivasan, Philip Y. Paik
  • Publication number: 20160097047
    Abstract: A method of growing cells on a droplet actuator is provided. The method may include providing a droplet actuator including a cell culture droplet including a cell culture medium and one or more cells; and maintaining the droplet at a temperature suitable for causing the cells to grow in the cell culture medium on the droplet actuator. Related methods, droplet actuators, and systems are also provided.
    Type: Application
    Filed: December 15, 2015
    Publication date: April 7, 2016
    Applicant: Advanced Liquid Logic, Inc.
    Inventors: Michael G. Pollack, Vamsee K. Pamula, Allen E. Eckhardt
  • Publication number: 20160051992
    Abstract: The invention provides a method of redistributing magnetically responsive beads in a droplet. The method may include conducting on a droplet operations surface one or more droplet operations using the droplet without removing the magnetically responsive beads from the region of the magnetic field. The droplet operations may in some cases be electrode-mediated. The droplet operations may redistribute and/or circulate the magnetically responsive beads within the droplet. In some cases, the droplet may include a sample droplet may include a target analyte. The redistributing of the magnetically responsive beads may cause target analyte to bind to the magnetically responsive beads. In some cases, the droplet may include unbound substances in a wash buffer. The redistributing of the magnetically responsive beads causes unbound substances to be freed from interstices of an aggregated set or subset of the magnetically responsive beads.
    Type: Application
    Filed: October 30, 2015
    Publication date: February 25, 2016
    Applicant: ADVANCED LIQUID LOGIC, INC.
    Inventors: PRASANNA THWAR, VAMSEE K. PAMULA, ARJUN SUDARSAN, RAMAKRISHNA SISTA
  • Patent number: 9267131
    Abstract: A method of growing cells on a droplet actuator is provided. The method may include providing a droplet actuator including a cell culture droplet including a cell culture medium and one or more cells; and maintaining the droplet at a temperature suitable for causing the cells to grow in the cell culture medium on the droplet actuator. Related methods, droplet actuators, and systems are also provided.
    Type: Grant
    Filed: March 26, 2014
    Date of Patent: February 23, 2016
    Assignee: ADVANCED LIQUID LOGIC, INC.
    Inventors: Michael G. Pollack, Vamsee K. Pamula, Allen E. Eckhardt
  • Patent number: 9243282
    Abstract: The present invention relates to droplet-based pyrosequencing including a method of identifying a base at a target position in a sample nucleic acid. The method includes: (a) providing a droplet microactuator including a first droplet including a sample nucleic acid immobilized on a bead; and (b) on the droplet microactuator: (i) contacting the first droplet with one or more reagent droplets to yield a second droplet, wherein the one or more reagent droplets include reagents for extending a double stranded portion of the sample nucleic acid by incorporating a nucleotide at the target position; (ii) splitting the second droplet to yield a third droplet including the bead and a fourth droplet lacking the bead; and (iii) assaying the third droplet to determine whether the nucleotide was incorporated at the target position.
    Type: Grant
    Filed: May 14, 2012
    Date of Patent: January 26, 2016
    Assignees: ADVANCED LIQUID LOGIC, INC, DUKE UNIVERSITY, THE BOARD OF TRUSTEES OF THE LELAND STANDFORD JUNIOR UNIVERSITY
    Inventors: Michael G. Pollack, Vamsee K. Pamula, Richard B. Fair, Peter B. Griffin
  • Publication number: 20160016172
    Abstract: Aspects of embodiments of the invention relate to a simulator including a visual display capable of outputting to a user a display one or more effects of a command series selected and a system including a droplet microactuator electronically coupled to and controlled by a processor capable of executing instructions, the droplet microactuator including a substrate comprising electrodes for conducting droplet operations. Further aspects of embodiments of the invention relate to a droplet operations troubleshooting apparatus. Other aspects of embodiments of the invention relate to a computer implemented method of displaying simulated microactuator droplets.
    Type: Application
    Filed: August 27, 2015
    Publication date: January 21, 2016
    Applicants: DUKE UNIVERSITY, ADVANCED LIQUID LOGIC, INC.
    Inventors: Michael G. Pollack, Philip Paik, Vamsee K. Pamula
  • Patent number: 9205433
    Abstract: The invention provides a method of redistributing magnetically responsive beads in a droplet. The method may include conducting on a droplet operations surface one or more droplet operations using the droplet without removing the magnetically responsive beads from the region of the magnetic field. The droplet operations may in some cases be electrode-mediated. The droplet operations may redistribute and/or circulate the magnetically responsive beads within the droplet. In some cases, the droplet may include a sample droplet may include a target analyte. The redistributing of the magnetically responsive beads may cause target analyte to bind to the magnetically responsive beads. In some cases, the droplet may include unbound substances in a wash buffer. The redistributing of the magnetically responsive beads causes unbound substances to be freed from interstices of an aggregated set or subset of the magnetically responsive beads.
    Type: Grant
    Filed: April 27, 2015
    Date of Patent: December 8, 2015
    Assignee: Advanced Liquid Logic, Inc.
    Inventors: Prasanna Thwar, Vamsee K. Pamula, Arjun Sudarsan, Ramakrishna Sista
  • Publication number: 20150336098
    Abstract: Apparatuses and methods for manipulating droplets are disclosed. In one embodiment, an apparatus for manipulating droplets is provided, the apparatus including a substrate, multiple arrays of electrodes disposed on the substrate, wherein corresponding electrodes in each array are connected to a common electrical signal, and a dielectric layer disposed on the substrate first side surface and patterned to cover the electrodes.
    Type: Application
    Filed: August 4, 2015
    Publication date: November 26, 2015
    Applicant: Duke University
    Inventors: Michael G. Pollack, Vamsee K. Pamula, Richard B. Fair
  • Publication number: 20150330943
    Abstract: The present invention relates to droplet-based particle sorting. According to one embodiment, a method of providing a droplet comprising a single cell is provided, wherein the method includes providing a droplet comprising a suspension of cells on an electrowetting droplet actuator surrounded by an oil medium, dispensing from the droplet to provide a dispensed droplet, determining whether the dispensed droplet on the electrowetting droplet actuator comprises a single cell, and sorting the dispensed droplet on the electrowetting droplet actuator based on the results of the determining step using electrowetting-mediated droplet operations.
    Type: Application
    Filed: July 22, 2015
    Publication date: November 19, 2015
    Applicant: ADVANCED LIQUID LOGIC, INC.
    Inventors: Michael G. Pollack, Vamsee K. Pamula, Vijay Srinivasan
  • Patent number: 9180450
    Abstract: Methods are provided for manipulating droplets. The methods include providing the droplet on a surface comprising an array of electrodes and a substantially co-planer array of reference elements, wherein the droplet is disposed on a first one of the electrodes, and the droplet at least partially overlaps a second one of the electrodes and an intervening one of the reference elements disposed between the first and second electrodes. The methods further include activating the first and second electrodes to spread at least a portion of the droplet across the second electrode and deactivating the first electrode to move the droplet from the first electrode to the second electrode.
    Type: Grant
    Filed: July 30, 2014
    Date of Patent: November 10, 2015
    Assignee: Advanced Liquid Logic, Inc.
    Inventors: Michael G. Pollack, Vamsee K. Pamula, Richard B. Fair
  • Publication number: 20150314293
    Abstract: A method of providing a droplet in contact with a magnetically responsive bead and having a reduced quantity of a substance.
    Type: Application
    Filed: May 22, 2015
    Publication date: November 5, 2015
    Applicants: DUKE UNIVERSITY, ADVANCED LIQUID LOGIC, INC.
    Inventors: Ramakrishna Sista, Vamsee K. Pamula, Michael G. Pollack, Vijay Srinivasan, Allen E. Eckhardt, Richard B. Fair
  • Publication number: 20150285792
    Abstract: The invention provides a method of circulating magnetically responsive beads within a droplet in a droplet actuator. The invention also provides methods for splitting droplets. The invention, in one embodiment, makes use of a droplet actuator with top and bottom substrates, a plurality of magnetic fields respectively present proximate the top and bottom substrates, wherein at least one of the magnet fields is selectively alterable, and a plurality of droplet operations electrodes positioned along at least one of the top and bottom surfaces. A droplet is positioned between the top and bottom surfaces and at least one of the magnetic fields is selectively altered.
    Type: Application
    Filed: June 22, 2015
    Publication date: October 8, 2015
    Applicant: Advanced Liquid Logic, Inc.
    Inventors: Ramakrishna Sista, Vamsee K. Pamula, Vijay Srinivasan, Michael G. Pollack, Allen Eckhardt
  • Publication number: 20150268235
    Abstract: The invention relates to bead incubating and washing on a droplet actuator. Methods for incubating magnetically responsive beads that are labeled with primary antibody, a sample (i.e., analyte), and secondary reporter antibodies on a magnet, on and off a magnet, and completely off a magnet are provided. Also provided are methods for washing magnetically responsive beads using shape-assisted merging of droplets. Also provided are methods for shape-mediated splitting, transporting, and dispensing of a sample droplet that contains magnetically responsive beads. The apparatuses and methods of the invention provide for rapid time to result and optimum detection of an analyte in an immunoassay.
    Type: Application
    Filed: June 5, 2015
    Publication date: September 24, 2015
    Applicant: ADVANCED LIQUID LOGIC, INC.
    Inventors: Michael G. Pollack, Vamsee K. Pamula, Ramakrishna Sista, Arjun Sudarsan
  • Patent number: 9139865
    Abstract: Aspects of embodiments of the invention relate to a simulator including a visual display capable of outputting to a user a display one or more effects of a command series selected and a system including a droplet microactuator electronically coupled to and controlled by a processor capable of executing instructions, the droplet microactuator including a substrate comprising electrodes for conducting droplet operations. Further aspects of embodiments of the invention relate to a droplet operations troubleshooting apparatus. Other aspects of embodiments of the invention relate to a computer implemented method of displaying simulated microactuator droplets.
    Type: Grant
    Filed: November 19, 2012
    Date of Patent: September 22, 2015
    Assignees: ADVANCED LIQUID LOGIC, INC., DUKE UNIVERSITY
    Inventors: Michael G. Pollack, Philip Paik, Vamsee K. Pamula