Patents by Inventor Yizhi Cai

Yizhi Cai has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11661589
    Abstract: Provided are modified microorganisms which are modified such that their growth can be controlled using exogenously provided compounds. The microorganisms can be modified by genetic alterations that include a promoter inducible by a first exogenously supplied compound. The promoter can be configured to drive expression of an RNA coding sequence that may be essential to growth of the microorganism. The microorganisms may also be modified to include site specific recombinase recognition sites flanking or within the RNA coding sequence so that expression of the corresponding site specific recombinase will disrupt transcription of the RNA. The site specific recombinase can be configured such that it expression and/or activity is suppressed by a second exogenously supplied compound. Methods of making the modified microorganisms and kits that contain reagents for making and using the modified microorganisms are also provided.
    Type: Grant
    Filed: August 27, 2018
    Date of Patent: May 30, 2023
    Assignees: New York University, The Johns Hopkins University
    Inventors: Jef D. Boeke, Neta Agmon, Yizhi Cai
  • Publication number: 20200024582
    Abstract: Provided are modified microorganisms which are modified such that their growth can be controlled using exogenously provided compounds. The microorganisms can be modified by genetic alterations that include a promoter inducible by a first exogenously supplied compound. The promoter can be configured to drive expression of an RNA coding sequence that may be essential to growth of the microorganism. The microorganisms may also be modified to include site specific recombinase recognition sites flanking or within the RNA coding sequence so that expression of the corresponding site specific recombinase will disrupt transcription of the RNA. The site specific recombinase can be configured such that it expression and/or activity is suppressed by a second exogenously supplied compound. Methods of making the modified microorganisms and kits that contain reagents for making and using the modified microorganisms are also provided.
    Type: Application
    Filed: August 27, 2018
    Publication date: January 23, 2020
    Inventors: Jef D. Boeke, Neta Agmon, Yizhi Cai
  • Patent number: 10059927
    Abstract: Provided are modified microorganisms which are modified such that their growth can be controlled using exogenously provided compounds. The microorganisms can be modified by genetic alterations that include a promoter inducible by a first exogenously supplied compound. The promoter can be configured to drive expression of an RNA coding sequence that may be essential to growth of the microorganism. The microorganisms may also be modified to include site specific recombinase recognition sites flanking or within the RNA coding sequence so that expression of the corresponding site specific recombinase will disrupt transcription of the RNA. The site specific recombinase can be configured such that it expression and/or activity is suppressed by a second exogenously supplied compound. Methods of making the modified microorganisms and kits that contain reagents for making and using the modified microorganisms are also provided.
    Type: Grant
    Filed: January 19, 2016
    Date of Patent: August 28, 2018
    Assignees: New York University, The Johns Hopkins University
    Inventors: Jef D. Boeke, Neta Agmon, Yizhi Cai
  • Patent number: 10006051
    Abstract: Provided are compositions and methods for use in assembling and expressing a plurality of transcription units using, in one aspect, homologous recombination in yeast. Yeast containing the plurality of transcription units, and isolated transcription units, are also provided. Kits for use in making the yeast and the transcript units are further included.
    Type: Grant
    Filed: April 24, 2017
    Date of Patent: June 26, 2018
    Assignees: New York University, Johns Hopkins University
    Inventors: Jef Boeke, Leslie Mitchell, Yizhi Cai, Neta Agmon
  • Publication number: 20170226532
    Abstract: Provided are compositions and methods for use in assembling and expressing a plurality of transcription units using, in one aspect, homologous recombination in yeast. Yeast containing the plurality of transcription units, and isolated transcription units, are also provided. Kits for use in making the yeast and the transcript units are further included.
    Type: Application
    Filed: April 24, 2017
    Publication date: August 10, 2017
    Inventors: Jef Boeke, Leslie Mitchell, Yizhi Cai, Neta Agmon
  • Patent number: 9631204
    Abstract: Provided are compositions and methods for use in assembling and expressing a plurality of transcription units using, in one aspect, homologous recombination in yeast. Yeast containing the plurality of transcription units, and isolated transcription units, are also provided. Kits for use in making the yeast and the transcript units are further included.
    Type: Grant
    Filed: June 17, 2015
    Date of Patent: April 25, 2017
    Assignees: New York University, Johns Hopkins University
    Inventors: Jef Boeke, Leslie Mitchell, Yizhi Cai, Neta Agmon
  • Publication number: 20160208227
    Abstract: Provided are modified microorganisms which are modified such that their growth can be controlled using exogenously provided compounds. The microorganisms can be modified by genetic alterations that include a promoter inducible by a first exogenously supplied compound. The promoter can be configured to drive expression of an RNA coding sequence that may be essential to growth of the microorganism. The microorganisms may also be modified to include site specific recombinase recognition sites flanking or within the RNA coding sequence so that expression of the corresponding site specific recombinase will disrupt transcription of the RNA. The site specific recombinase can be configured such that it expression and/or activity is suppressed by a second exogenously supplied compound. Methods of making the modified microorganisms and kits that contain reagents for making and using the modified microorganisms are also provided.
    Type: Application
    Filed: January 19, 2016
    Publication date: July 21, 2016
    Inventors: Jef D. Boeke, Neta Agmon, Yizhi Cai
  • Publication number: 20160046972
    Abstract: Provided are compositions and methods for use in assembling and expressing a plurality of transcription units using, in one aspect, homologous recombination in yeast. Yeast containing the plurality of transcription units, and isolated transcription units, are also provided. Kits for use in making the yeast and the transcript units are further included.
    Type: Application
    Filed: June 17, 2015
    Publication date: February 18, 2016
    Inventors: Jef Boeke, Leslie Mitchell, Yizhi Cai, Neta Agmon
  • Publication number: 20080243397
    Abstract: The present invention provides methods for designing and verifying nucleic acid molecules having one or more desired properties. The methods are typically encoded into software, and typically include use of databases and algorithms to determine if nucleic acid molecules designed to have various elements in functional relationships have the intended properties. The result is achieved by determining if the various elements of the designed nucleic acid are in the correct order and physical relationship to other elements, and that the proper elements are selected. Computer systems for implementing the method, as well as business methods for reaping monetary gain from use of the methods, are also disclosed.
    Type: Application
    Filed: March 30, 2008
    Publication date: October 2, 2008
    Inventors: Jean Peccoud, Yizhi Cai