Patents Assigned to AbClonal Science, Inc.
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Patent number: 12630813Abstract: Disclosed is using a TEV protease (wild type or mutant) suited for removal from a reaction mixture, wherein the TEV protease displays a dual affinity tag including a chitin binding domain (CBD) tag and a histidine tag, preferably where the CBD tag precedes the N-terminus of the protease and the CBD tag is preceded by the histidine tag, which is preferably a 6-mer histidine tag; and optionally further including linkers, preferably Gly-Ser linkers, and more preferably a 6-mer Gly-Ser linker, between the tags. A linker, also preferably a Gly-Ser linker, can also follow the CBD tag and precede the protease portion. In certain embodiments, no such linkers are present and in other embodiments, only one such linker is present.Type: GrantFiled: January 31, 2024Date of Patent: May 19, 2026Assignee: ABCLONAL SCIENCE, INC.Inventors: Dapeng Sun, Zhenyu Zhu, Aine Quimby
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Patent number: 12467040Abstract: The invention includes a mutant Taq polymerase, which can effectively amplify a target sequence under conditions of salt concentration(s) similar to body fluids, including blood, serum or plasma preserved with sodium citrate. The mutant Taq polymerase, or a biologically active fragment thereof, has one or more substitutions differing from the wild type as shown in Table I.Type: GrantFiled: September 28, 2021Date of Patent: November 11, 2025Assignee: ABclonal Science, Inc.Inventors: Zhenyu Zhu, Dapeng Sun, Weiling Peng
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Patent number: 12435319Abstract: Either wild type or mutant Serratia marcescens Nuclease (“SMN”) is engineered to display a C-terminal Chitin Binding Domain (CBD-tag), followed, at the C-terminus side of the CBD-tag, by a poly-histidine tag (His-tag), where the His-tag is preferably a 6-mer and preferably is preceded by a Gly-Ser linker, thereby generating a recombinant SMN protein that retains dual affinity tags (a CBD-tag and a His-tag) at the C-terminus, to make it easily removed from a reaction solution following digestion of nucleic acids in the reaction mixture. It can also be used for binding SMN to a solid support for use in nucleic acid digestion in a sample contacted with the solid support.Type: GrantFiled: January 30, 2023Date of Patent: October 7, 2025Assignee: AbClonal Science, Inc.Inventors: Dapeng Sun, Aine Quimby, Zhenyu Zhu
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Patent number: 12428630Abstract: Taq DNA polymerase mutants exhibiting reverse transcriptase activity compared to wild type polymerase were engineered, characterized, and selected via polymerase chain reactions visualized via electrophoresis on agarose gels. Initial screening was followed up with probe-based qualitative, real-time PCR (qPCR) with a typical reverse transcription cycling protocol to detect specified ribonucleic acid (RNA) target sequences. The engineered variants can render robust cDNA from RNA target substrates and amplify that cDNA under standard reaction conditions without the assistance of added reverse transcriptase enzymes.Type: GrantFiled: May 25, 2023Date of Patent: September 30, 2025Assignee: AbClonal Science, Inc.Inventors: Zhenyu Zhu, Dapeng Sun, Aine Quimby, Nicholas J. DeBerardinis, Krista Ferrari
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Patent number: 12416044Abstract: The invention includes a mutant T4 DNA ligase or a biologically active fragment thereof, which has greater activity than wild type T4 DNA ligase. The mutant T4 DNA ligase, or the biologically active fragment, has one or more substitutions differing from the wild type, as described more fully in the Summary.Type: GrantFiled: March 21, 2022Date of Patent: September 16, 2025Assignee: AbClonal Science, Inc.Inventors: Zhenyu Zhu, Aine Quimby, Dapeng Sun, Alicia DiCicco
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Patent number: 12359185Abstract: A number of T4 DNA ligase mutants exhibiting enhanced ligation activity in the presence of high salt concentrations compared to the wild-type ligase were engineered, characterized, and selected via gel electrophoresis of ligation products from a standard ligation assay. Ligase catalyzes the formation of phosphodiester bonds between the 5? and 3? ends of complementary cohesive ends or blunt ends of duplex DNA, a process that is vital to numerous molecular biology processes including cloning and sequencing.Type: GrantFiled: May 10, 2023Date of Patent: July 15, 2025Assignee: AbClonal Science, Inc.Inventors: Alicia DiCicco, Zhenyu Zhu, Aine Quimby
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Patent number: 12258590Abstract: The invention includes a mutant Taq polymerase, which can significantly extend and amplify a target sequence where the extension conditions are time limited to as little as one second. The mutant Taq polymerase, or a biologically active fragment thereof, has one or more substitutions differing from the wild type as shown in Table I.Type: GrantFiled: November 3, 2023Date of Patent: March 25, 2025Assignee: ABCLONAL SCIENCE, INC.Inventors: Zhenyu Zhu, Dapeng Sun
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Patent number: 11821010Abstract: The invention includes a mutant Taq polymerase, which can significantly extend and amplify a target sequence where the extension conditions are time limited to as little as one second. The mutant Taq polymerase, or a biologically active fragment thereof, has one or more substitutions differing from the wild type as shown in Table I.Type: GrantFiled: November 30, 2020Date of Patent: November 21, 2023Assignee: AbClonal Science, Inc.Inventors: Zhenyu Zhu, Dapeng Sun
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Patent number: 11788082Abstract: A number of T4 DNA ligase mutants exhibiting enhanced ligation activity at temperatures above 37° C. compared to the wild-type ligase were engineered, characterized, and selected via gel electrophoresis of ligation products from a standard ligation assay. T4 Ligase catalyzes the formation of phosphodiester bonds between the 5? and 3? ends of complementary cohesive ends or blunt ends of duplex DNA, a process that is vital to numerous molecular biology processes including cloning and sequencing.Type: GrantFiled: February 22, 2022Date of Patent: October 17, 2023Assignee: ABclonal Science, Inc.Inventors: Zhenyu Zhu, Aine Quimby, Dapeng Sun, Alicia DiCicco
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Patent number: 11781126Abstract: Proteases are enzymes which hydrolyze protein enzymes, eliminating their activity. The present invention exploits the hydrolyzing activity of proteases including proteinase K, endoproteinase LysC and/or trypsin to control the activity of restriction enzymes and/or eliminate or reduce production of unwanted DNA or RNA fragments (known as star activity).Type: GrantFiled: November 12, 2022Date of Patent: October 10, 2023Assignee: ABclonal Science, Inc.Inventors: Zhenyu Zhu, Dapeng Sun, Aine Quimby, Michaela Shottes
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Patent number: 11767524Abstract: Disclosed is a product and process, wherein one adds a N-terminal Histamine-Maltose Binding Protein (“MBP”) tag to endonucleases, including restriction endonucleases like Hind III, and binds the tagged fusion protein to a solid support, preferably beads, once the enzyme has digested oligonucleotides in solution, in order to arrest further digestion. Preferred beads for binding the tagged enzyme are magnetic beads, which can easily be removed from solution by binding to a support and then removing it, or can be accumulated by magnetic attraction in a particular region. More preferred are magnetic beads bound to iminodiacetic acid or nitrilotriacetic acid.Type: GrantFiled: September 22, 2020Date of Patent: September 26, 2023Assignee: ABclonal Science, Inc.Inventors: Zhenyu Zhu, Dapeng Sun, Michaela Shottes
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Patent number: 11746142Abstract: Disclosed is producing recombinant SARS-CoV-2 spike protein in a pre-fusion state, using furin knock out or knockdown mammalian cells (such as HEK293, CHO or other mammalian cells) and using them to generate antibodies and related binding agents. The antibodies/binding agents can be used in SARS-CoV-2 detection assays or in diagnosis of active or prior infection with SARS-CoV-2; in prophylaxis or as a therapeutic; or for prophylactic or therapeutic use against coronaviruses related to SARS-CoV-2.Type: GrantFiled: April 28, 2021Date of Patent: September 5, 2023Assignee: ABCLONAL SCIENCE, INC.Inventors: Yang Xiang, Yan Tan
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Patent number: 11685913Abstract: A number of T4 DNA ligase mutants exhibiting enhanced ligation activity in the presence of high salt concentrations compared to the wild-type ligase were engineered, characterized, and selected via gel electrophoresis of ligation products from a standard ligation assay. Ligase catalyzes the formation of phosphodiester bonds between the 5? and 3? ends of complementary cohesive ends or blunt ends of duplex DNA, a process that is vital to numerous molecular biology processes including cloning and sequencing.Type: GrantFiled: February 18, 2022Date of Patent: June 27, 2023Assignee: AbClonal Science, Inc.Inventors: Alicia DiCicco, Zhenyu Zhu, Aine Quimby
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Patent number: 11649441Abstract: Disclosed are Taq DNA polymerase mutants which exhibit enhanced efficiency in qPCR compared to the wild type Taq DNA polymerase. Such mutants include: V62S, V64S, A70F, F73A, A77F, P253G, E255K, D257R, A259F, A271F, L288S, E289K, S357I, L361S, L376S, P382G, T385I, G418P, R419D, E421K, L461S, A472F, E497K, L498S, E524K, D551R, R556D, S679I, L789S, E189K/E507K/E742K (See Sequence Listing Guide for the mutants' amino acid and protein sequences).Type: GrantFiled: September 9, 2021Date of Patent: May 16, 2023Assignee: ABCLONAL SCIENCE, INC.Inventors: Zhenyu Zhu, Dapeng Sun, Aine Quimby
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Patent number: 11613738Abstract: The invention includes a mutant Taq polymerase or biologically active fragment thereof, which can significantly extend and amplify a target sequence in comparison to wild type Taq polymerase, where the extension mixture includes asymmetrical cyanine dye, including SYBR Green I. The mutant Taq polymerase, or a biologically active fragment thereof, has one or more substitutions differing from the wild type as shown in Table I.Type: GrantFiled: May 11, 2020Date of Patent: March 28, 2023Assignee: ABCLONAL SCIENCE, INC.Inventors: Zhenyu Zhu, Dapeng Sun
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Publication number: 20230033390Abstract: Disclosed is a device for angling a multi-well plate during shaking on a typical low speed laboratory incubator-shaker to facilitate cell growth. An assembly with a holder for a deep-well multi-well plate to attach it to a base has an adjustable-angle joint. The base is attached to a conventional incubator shaker tray via screws or a sticky pad. The adjustable-angle joint allows maintaining the desired angle of the plate, even at full shaking speed.Type: ApplicationFiled: August 2, 2021Publication date: February 2, 2023Applicant: AbClonal Science, Inc.Inventors: Yang Xiang, Alexa Vahey, Aine Quimby
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Patent number: 11512296Abstract: Proteases are enzymes which hydrolyze protein enzymes, eliminating their activity. The present invention exploits the hydrolyzing activity of proteases including proteinase K, endoproteinase LysC and/or trypsin to control the activity of restriction enzymes and/or eliminate or reduce production of unwanted DNA or RNA fragments (known as star activity).Type: GrantFiled: February 9, 2021Date of Patent: November 29, 2022Assignee: ABclonal Science, Inc.Inventors: Zhenyu Zhu, Dapeng Sun, Aine Quimby, Michaela Shottes
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Patent number: 11168312Abstract: The invention includes a mutant Taq polymerase, which can effectively amplify a target sequence under conditions of salt concentration(s) similar to body fluids, including blood, serum or plasma preserved with sodium citrate. The mutant Taq polymerase, or a biologically active fragment thereof, has one or more substitutions differing from the wild type as shown in Table I.Type: GrantFiled: March 9, 2020Date of Patent: November 9, 2021Assignee: ABclonal Science, Inc.Inventors: Zhenyu Zhu, Dapeng Sun, Weiling Peng
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Patent number: 10947518Abstract: Proteases are enzymes which hydrolyze protein enzymes, eliminating their activity. The present invention exploits the hydrolyzing activity of proteases including proteinase K, endoproteinase LysC and/or trypsin to control the activity of restriction enzymes and/or eliminate or reduce production of unwanted DNA or RNA fragments (known as star activity).Type: GrantFiled: October 2, 2020Date of Patent: March 16, 2021Assignee: ABclonal Science, Inc.Inventors: Zhenyu Zhu, Dapeng Sun, Aine Quimby, Michaela Shottes
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Patent number: 10920202Abstract: Disclosed is an engineered thermolabile mutant of Serratia Marcescens Nuclease. In the same buffer as used for optimal enzyme activity, after 60° C. for 20 min, while the wild type retained 12.5% activity, the thermolabile mutant R146D/D156R/D229R/D245R (SEQ ID NO: 12, without the first 21 amino acids, which are a signal peptide) retained only 0.39% activity. Heat inactivation of the mutant, when it is used for protein purification, can be used after a period when substantial DNA in a protein has been degraded, but before unwanted degradation takes place.Type: GrantFiled: August 20, 2020Date of Patent: February 16, 2021Assignee: AbClonal Science, Inc.Inventors: Zhenyu Zhu, Dapeng Sun, Michaela Shottes