Abstract: Disclosed herein are panels related to the diagnosis or recognition of colon and colorectal cancer in a subject. The disclosed panels and related methods are used to predict or assess colon tumor status in a patient. They can be used to determine nature of tumor, recurrence, or patient response to treatments. Some embodiments of the methods include generating a report for clinical management.
Type:
Grant
Filed:
April 8, 2016
Date of Patent:
June 27, 2017
Assignee:
APPLIED PROTEOMICS, INC.
Inventors:
John Blume, Jeffrey Jones, Ryan Benz, Athit Kao, Lisa Croner, Roslyn Dillon, Jia You, Bruce Wilcox
Abstract: The disclosed methods are used to predict or assess colon tumor status in a patient. They can be used to determine nature of tumor, recurrence, or patient response to treatments. Some embodiments of the methods include generating a report for clinical management. The methodology provided herein is intended to detect technical variations and to allow for data normalization and enhance signal detection and build predictive proteins profiles of disease status and response.
Type:
Application
Filed:
December 2, 2013
Publication date:
August 21, 2014
Applicant:
Applied Proteomics, Inc.
Inventors:
John Blume, Ryan Benz, Lisa Croner, Roslyn Dillon, Arlo Z. Randall, Jeffrey Jones, Heather Skor, Tom Stockfisch, Bruce Wilcox, Daniel Ruderman
Abstract: This invention relates to methods and kits for positive selection of species of interest based on peptide/protein sequence from a biological sample. The species of interest may be proteins and/or peptides of interest which may be placed through a mass spectrometer to obtain a blood peptide/protein signature. The blood peptide/protein signature may be used in proteomic analysis. The techniques include but are not limited to the use of collectors comprising nucleic acid molecules to extract a composition that has a lower concentration of a high abundance species of interest from a sample. This limits the level of influence that any collectors species may have on the results of a mass spectra.
Type:
Grant
Filed:
November 30, 2007
Date of Patent:
June 7, 2011
Assignees:
Cedars-Sinai Medical Center, Applied Proteomics, Inc.