Abstract: The present invention provides assay systems and methods for detection of copy number variation at one or more loci and polymorphism detection at one or more loci in a mixed sample from an individual.
Type:
Grant
Filed:
May 23, 2019
Date of Patent:
April 12, 2022
Assignee:
Ariosa Diagnostics, Inc.
Inventors:
Andrew Sparks, Craig Struble, Eric Wang, Arnold Oliphant
Abstract: This invention relates to a binomial calculation of copy number of data obtained from a mixed sample having a first source and a second source.
Abstract: The present invention provides methods for non-invasive determination of X and/or Y chromosomal abnormalities indicative of aneuploidy or sex mosaicisms in a maternal sample by detecting and determining the relative contribution of genetic sequences from the X chromosome and/or the Y chromosome in the maternal sample.
Type:
Grant
Filed:
June 13, 2013
Date of Patent:
March 8, 2022
Assignee:
Ariosa Diagnostics, Inc.
Inventors:
Craig Struble, Arnold Oliphant, Eric Wang
Abstract: The present invention provides detection systems and methods for detection of loci and genomic regions in a sample, including mixed samples, using hybridization to an array.
Type:
Grant
Filed:
January 13, 2020
Date of Patent:
December 21, 2021
Assignee:
Ariosa Diagnostics, Inc.
Inventors:
Arnold Oliphant, Jacob Zahn, Kara Jeneau, Patrick Bogard, Stephanie Huang
Abstract: The present invention provides assay systems and methods for detection of copy number variation at one or more loci and polymorphism detection at one or more loci in a mixed sample from an individual.
Type:
Grant
Filed:
October 12, 2018
Date of Patent:
August 17, 2021
Assignee:
Ariosa Diagnostics, Inc.
Inventors:
Andrew Sparks, Arnold Oliphant, Jacob Zahn, Ken Song, John Stuelpnagel
Abstract: The present invention provides processes for determining accurate risk probabilities for chromosome dosage abnormalities. Specifically, the invention provides non-invasive evaluation of genomic variations through chromosome-selective sequencing and non-host fraction data analysis of maternal samples.
Type:
Grant
Filed:
March 21, 2012
Date of Patent:
June 8, 2021
Assignee:
Ariosa Diagnostics, Inc.
Inventors:
John Stuelpnagel, Ken Song, Arnold Oliphant, Craig Struble
Abstract: The present invention provides assays systems and methods for detection of genetic variants in a sample, including copy number variation and single nucleotide polymorphisms. The invention preferably employs the technique of tandem ligation—, e.g., the ligation of two or more fixed sequence oligonucleotides and one or more bridging oligonucleotides complementary to a region between the fixed sequence oligonucleotides—combined with detection of levels of particular genomic regions using array hybridization.
Type:
Grant
Filed:
January 23, 2019
Date of Patent:
March 23, 2021
Assignee:
Ariosa Diagnostics, Inc.
Inventors:
Arnold Oliphant, Andrew Sparks, John Stuelpnagel, Ken Song
Abstract: The present invention provides assays systems and methods for detection of chromosomal abnormalities and status of single loci associated with monogenic or polygenic traits in a sample containing nucleic acids from a maternal and a fetal source.
Type:
Grant
Filed:
October 12, 2018
Date of Patent:
February 2, 2021
Assignee:
Ariosa Diagnostics, Inc.
Inventors:
Andrew Sparks, Arnold Oliphant, Jacob Zahn, Ken Song, John Stuelpnagel
Abstract: This invention relates to a binomial calculation of copy number of data obtained from a mixed sample having a first source and a second source.
Abstract: The present invention provides processes for determining accurate risk probabilities for fetal aneuploidies. Specifically, the invention provides non-invasive evaluation of genomic variations through chromosome-selective sequencing and non-host fraction data analysis of maternal samples.
Type:
Grant
Filed:
August 8, 2018
Date of Patent:
July 21, 2020
Assignee:
Ariosa Diagnostics, Inc.
Inventors:
Arnold Oliphant, Andrew Sparks, Eric Wang, Craig Struble
Abstract: The present invention provides processes for determining accurate risk probabilities for fetal aneuploidies. Specifically, the invention provides non-invasive evaluation of genomic variations through chromosome-selective sequencing and non-host fraction data analysis of maternal samples.
Type:
Grant
Filed:
September 14, 2015
Date of Patent:
July 21, 2020
Assignee:
Ariosa Diagnostics, Inc.
Inventors:
Arnold Oliphant, Andrew Sparks, Eric Wang, Craig Struble
Abstract: The present invention provides detection systems and methods for detection of loci and genomic regions in a sample, including mixed samples, using hybridization to an array.
Type:
Grant
Filed:
December 20, 2016
Date of Patent:
January 14, 2020
Assignee:
Ariosa Diagnostics, Inc.
Inventors:
Arnold Oliphant, Jacob Zahn, Kara Juneau, Patrick Bogard, Stephanie Huang
Abstract: The present invention provides assay systems and methods for detection of copy number variation at one or more loci and polymorphism detection at one or more loci in a mixed sample from an individual.
Type:
Grant
Filed:
August 8, 2011
Date of Patent:
June 4, 2019
Assignee:
Ariosa Diagnostics, Inc.
Inventors:
Andrew Sparks, Craig Struble, Eric Wang, Arnold Oliphant
Abstract: The present invention provides assays systems and methods for detection of genetic variants in a sample, including copy number variation and single nucleotide polymorphisms. The invention preferably employs the technique of tandem ligation—, e.g., the ligation of two or more fixed sequence oligonucleotides and one or more bridging oligonucleotides complementary to a region between the fixed sequence oligonucleotides—combined with detection of levels of particular genomic regions using array hybridization.
Type:
Grant
Filed:
October 9, 2015
Date of Patent:
March 19, 2019
Assignee:
Ariosa Diagnostics, Inc.
Inventors:
Arnold Oliphant, Andrew Sparks, John Stuelpnagel, Ken Song
Abstract: The present invention provides assay systems and related methods for determining genetic abnormalities in mixed samples comprising cell free DNA from both normal and putative genetically atypical cells. Exemplary mixed samples for analysis using the assay systems of the invention include samples comprising both maternal and fetal cell free DNA and samples that contain DNA from normal cells and circulating cancerous cells.
Type:
Grant
Filed:
February 29, 2012
Date of Patent:
January 1, 2019
Assignee:
ARIOSA DIAGNOSTICS, INC.
Inventors:
Ken Song, Arnold Oliphant, John Stuelpnagel, Andrew Sparks
Abstract: The present invention provides assay systems and methods for determining the percent fetal contribution of cell-free DNA in a maternal sample from a pregnant female with an egg donor pregnancy. Further provided, are assay systems and methods for determining a statistical likelihood of the presence or absence of a fetal aneuploidy in a maternal sample using a determined percent fetal cell-free DNA in the sample.
Type:
Grant
Filed:
December 19, 2012
Date of Patent:
November 20, 2018
Assignee:
ARIOSA DIAGNOSTICS, INC.
Inventors:
Arnold Oliphant, Eric Wang, Craig Struble
Abstract: The present invention provides assays systems and methods for detection of chromosomal abnormalities and status of single loci associated with monogenic or polygenic traits in a sample containing nucleic acids from a maternal and a fetal source.
Type:
Grant
Filed:
November 10, 2011
Date of Patent:
November 20, 2018
Assignee:
ARIOSA DIAGNOSTICS, INC.
Inventors:
Andrew Sparks, Arnold Oliphant, Jacob Zahn, Ken Song, John Stuelpnagel
Abstract: The present invention provides assay systems and methods for detection of copy number variation at one or more loci and polymorphism detection at one or more loci in a mixed sample from an individual.
Type:
Grant
Filed:
July 8, 2016
Date of Patent:
November 20, 2018
Assignee:
ARIOSA DIAGNOSTICS, INC.
Inventors:
Andrew Sparks, Arnold Oliphant, Jacob Zahn, Ken Song, John Stuelpnagel
Abstract: The present invention provides methods for non-invasive determination of sex in a fetus or of Y chromosomal frequency abnormalities—indicative of aneuploidy or sex mosaicisms in a fetus—by detecting and determining the relative contribution genetic sequences from the Y chromosome in view of the percent fetal contribution in a maternal mixed sample.
Type:
Grant
Filed:
March 8, 2013
Date of Patent:
June 12, 2018
Assignee:
ARIOSA DIAGNOSTICS, INC.
Inventors:
Craig Struble, Arnold Oliphant, Eric Wang
Abstract: The present invention provides assays systems and methods for detection of chromosomal abnormalities and status of single loci associated with monogenic or polygenic traits in a sample containing nucleic acids from a maternal and a fetal source.
Type:
Grant
Filed:
August 8, 2011
Date of Patent:
February 13, 2018
Assignee:
Ariosa Diagnostics, Inc.
Inventors:
Andrew Sparks, Arnold Oliphant, Jacob Zahn, Ken Song, John Stuelpnagel