Patents Assigned to Berry and Associates, Inc.
  • Patent number: 8198290
    Abstract: The present invention provides for compounds of Formula I and II: wherein y, X, Y, Z, R1, and R2 have any of the values defined there for in the specification. The compounds of formula I are useful as reagents in the isolation and the assay of PQQ dependent enzymes. Also provided are compositions comprising compounds of Formula I and II.
    Type: Grant
    Filed: December 23, 2009
    Date of Patent: June 12, 2012
    Assignee: Berry and Associates, Inc.
    Inventor: John C. Hodges
  • Publication number: 20120142908
    Abstract: The present invention provides for compounds of Formula I: wherein X—N and R1-R4 have any of the values disclosed in the specification. The compounds of Formula I are useful as reagents to introduce N-alkyl nucleosides into DNA oligonucleotides. The present invention also provides for methods of synthesizing the compounds of Formula I.
    Type: Application
    Filed: November 29, 2011
    Publication date: June 7, 2012
    Applicant: Berry and Associates, Inc.
    Inventors: David A. Berry, Lana L. Berry, John C. Hodges
  • Publication number: 20120035362
    Abstract: The present invention provides for compounds of Formula I: wherein L and R1-R6 have any of the values defined there for in the specification. The compounds of formula I are useful as reagents to form folic acid conjugates with hydroxyl-containing compounds of interest, such as oligonucleotides and anti-cancer compounds.
    Type: Application
    Filed: August 1, 2011
    Publication date: February 9, 2012
    Applicant: Berry and Associates, Inc.
    Inventors: Nancy Sue Barta, John Cooke Hodges
  • Publication number: 20110190485
    Abstract: The present invention provides for compounds of Formulas I-III, and salts thereof, wherein n, m, R1, R2, R3, and R4 have any of the values defined there for in the specification. The compounds of formula I may be used in the synthesis of oligonucleotides such as compounds of formula II (bearing a 3?-thiol) or formula III (bearing a 3?-disulfide).
    Type: Application
    Filed: February 2, 2010
    Publication date: August 4, 2011
    Applicant: Berry and Associates, Inc.
    Inventor: David Allen Berry
  • Publication number: 20110152526
    Abstract: The present invention provides for compounds of Formula I and II: wherein y, X, Y, Z, R1, and R2 have any of the values defined there for in the specification. The compounds of formula I are useful as reagents in the isolation and the assay of PQQ dependent enzymes. Also provided are compositions comprising compounds of Formula I and II.
    Type: Application
    Filed: December 23, 2009
    Publication date: June 23, 2011
    Applicant: Berry and associates, Inc.
    Inventor: John C. Hodges
  • Patent number: 7960526
    Abstract: The present invention provides for reagents for the introduction of colorimetric-oxycarbonyl protecting groups, compounds bearing colorimetric-oxycarbonyl protecting groups, and the use thereof in solid-supported organic syntheses of oligonucleotides, polypeptides, polysaccharides, and combinatorial libraries.
    Type: Grant
    Filed: March 30, 2009
    Date of Patent: June 14, 2011
    Assignee: Berry and Associates, Inc.
    Inventors: John C. Hodges, Yam Foo Poon, William H. Pearson
  • Patent number: 7879986
    Abstract: The specification discloses quenchers of excited state energy, probes and other conjugates comprising the same, and methods for their use. The quenchers of excited state energy have a structure comprising at least one reactive functional group for linking the quencher to a carrier molecule and at least three radicals covalently linked via exocyclic diazo bonds, the at least three radicals including at least one comprising a julolidine of the nominal formula: and the remainder of the at least three radicals being selected from the group of substituted and unsubstituted aryls, substituted and unsubstituted heteroaryls, and combinations thereof.
    Type: Grant
    Filed: February 3, 2006
    Date of Patent: February 1, 2011
    Assignee: Berry & Associates, Inc.
    Inventors: David A. Berry, William H. Pearson
  • Publication number: 20100249393
    Abstract: The present invention provides for reagents for the introduction of colorimetric-oxycarbonyl protecting groups, compounds bearing colorimetric-oxycarbonyl protecting groups, and the use thereof in solid-supported organic syntheses of oligonucleotides, polypeptides, polysaccharides, and combinatorial libraries.
    Type: Application
    Filed: March 30, 2009
    Publication date: September 30, 2010
    Applicant: Berry and Associates, Inc.
    Inventors: John C. Hodges, Yam Foo Poon, William H. Pearson
  • Patent number: 7741506
    Abstract: A myo-inositol derivative: R1, R2, R3 and R4 are identical, being selected from PO3H2, PO3Na2, PO3K2, PO3Li2, PO3Ca, PO3Mg, PO3(NH4)2, PO3(RNH3)2, PO3(R2NH2)2, PO3(R4N)2, PO(OR)2, H, COZ and BHPP, where R is benzyl or alkyl of 1 to 6 carbon atoms and Z is an alkyl or arylalky group providing a cleavable protecting group; R5 is one of H, benzyl, 4-methoxybenzyl, COZ, PO3H2, PO3Na2, PO3K2, PO3Li2, PO3Ca, PO3Mg, PO3(NH4)2, PO3(RNH3)2, PO3(R2NH2)2, PO3(R4N)2, PO(OR)2, and BHPP, where R is benzyl or alkyl of 1 to 6 carbon atoms and Z is an alkyl or arylalky group providing a cleavable protecting group; X is one of CH2, CH2CH2O, and CH2CH2CH2O; n is an integer from 1 to 8; L1 is a single bond or CH2; L2 is one of a single bond, CONH, CH2CONH, CH2CH2CONH, CH2CH2NHCO, CH2CH2NHCONH, CH2CH2NHCSNH, CH2CH2NHSO2, CH2CH2CH2NHCO, CH2CH2CH2NHCONH, CH2CH2CH2NHCSNH, CH2CH2CH2NHSO2, NHCO, NHCONH, NHCSNH, OCONH, CH2, CH2CH2, CH2CH2O, CH2CH2S, CH2CH2NH, CH2CH2CH2, CH2CH2CH2O, CH2CH2CH2S, CH2CH2CH2NH, and NH—SO2; and R6 is a U
    Type: Grant
    Filed: November 5, 2007
    Date of Patent: June 22, 2010
    Assignee: Berry & Associates, Inc.
    Inventor: David A. Berry
  • Publication number: 20100087634
    Abstract: Fluorous-tagged oligonucleotide reagents and an oligonucleotide purification methodology making use thereof, the method comprising: Synthesizing oligonucleotides using oligonucleotide reagents each bearing at least one fluorous group to yield a mixture of synthesis products and reagents, the mixture including at least one target synthesized oligonucleotide bearing at least one fluorous group; passing the mixture through a separation medium having an affinity for the at least one fluorous group so that the target synthesized oligonucleotide bearing at least one fluorous group is adsorbed by the separation medium; washing the separation medium with at least a first solvent to selectively dissociate therefrom substantially all synthesis products and reagents of the heterogenous mixture other than the at least one target synthesized oligonucleotide bearing at least one fluorous group; and subsequently dissociating the at least one synthesized oligonucleotide from the separation medium, with or without the fluorou
    Type: Application
    Filed: October 20, 2009
    Publication date: April 8, 2010
    Applicant: BERRY & ASSOCIATES, INC.
    Inventors: David A. Berry, William H. Pearson