Patents Assigned to Chromagen
  • Publication number: 20070031935
    Abstract: The invention is concerned with the systematic elucidation and identification of regulatory sequences. The invention provides among others screenings and detection methods with which regulatory sequences can be identified. The invention further provides regulatory sequences and use thereof in various fields such as, but not limited to, protein production, diagnostics, transgenic plants and animals, and the therapeutic field.
    Type: Application
    Filed: October 13, 2006
    Publication date: February 8, 2007
    Applicant: ChromaGenics B.V.
    Inventors: Arie Otte, Arthur Kruckeberg
  • Publication number: 20070031933
    Abstract: The invention is concerned with the systematic elucidation and identification of regulatory sequences. The invention provides among others screenings and detection methods with which regulatory sequences can be identified. The invention further provides regulatory sequences and use thereof in various fields such as, but not limited to, protein production, diagnostics, transgenic plants and animals, and the therapeutic field.
    Type: Application
    Filed: October 13, 2006
    Publication date: February 8, 2007
    Applicant: ChromaGenics B.V.
    Inventors: Arie Otte, Arthur Kruckeberg
  • Publication number: 20070031934
    Abstract: The invention is concerned with the systematic elucidation and identification of regulatory sequences. The invention provides among others screenings and detection methods with which regulatory sequences can be identified. The invention further provides regulatory sequences and use thereof in various fields such as, but not limited to, protein production, diagnostics, transgenic plants and animals, and the therapeutic field.
    Type: Application
    Filed: October 13, 2006
    Publication date: February 8, 2007
    Applicant: ChromaGenics B.V.
    Inventors: Arie Otte, Arthur Kruckeberg
  • Publication number: 20070026499
    Abstract: The invention is concerned with the systematic elucidation and identification of regulatory sequences. The invention provides among others screenings and detection methods with which regulatory sequences can be identified. The invention further provides regulatory sequences and use thereof in various fields such as, but not limited to, protein production, diagnostics, transgenic plants and animals, and the therapeutic field.
    Type: Application
    Filed: October 13, 2006
    Publication date: February 1, 2007
    Applicant: ChromaGenics B.V.
    Inventors: Arie Otte, Arthur Kruckeberg
  • Publication number: 20070026498
    Abstract: The invention is concerned with the systematic elucidation and identification of regulatory sequences. The invention provides among others screenings and detection methods with which regulatory sequences can be identified. The invention further provides regulatory sequences and use thereof in various fields such as, but not limited to, protein production, diagnostics, transgenic plants and animals, and the therapeutic field.
    Type: Application
    Filed: October 13, 2006
    Publication date: February 1, 2007
    Applicant: ChromaGenics B.V.
    Inventors: Arie Otte, Arthur Kruckeberg
  • Publication number: 20060195935
    Abstract: The invention provides a DNA molecule comprising an open reading frame sequence that encodes a selectable marker polypeptide, wherein said DNA molecule in the coding strand comprises a translation start sequence for the selectable marker polypeptide having a GTG startcodon or a TTG startcodon, and wherein the open reading frame sequence that encodes the selectable marker protein has been mutated to replace at least half of its CpG dinucleotides as compared to the native open reading frame sequence that encodes the selectable marker protein. The invention further provides such DNA molecules wherein the open reading frame sequence that encodes a selectable marker polypeptide is part of a multicistronic transcription unit that further comprises an open reading frame sequence encoding a polypeptide of interest. The invention also provides methods for obtaining host cells expressing a polypeptide of interest, said host cells comprising the DNA molecules of the invention.
    Type: Application
    Filed: May 2, 2006
    Publication date: August 31, 2006
    Applicant: Chromagenics B.V.
    Inventors: Arie Otte, Henricus Van Blokland, Theodorus Kwaks, Richard Bernardus Sewalt
  • Publication number: 20060172382
    Abstract: The invention provides a DNA molecule comprising a multicistronic transcription unit coding for i) a selectable marker polypeptide functional in a eukaryotic host cell, and for ii) a polypeptide of interest, the polypeptide of interest having a translation initiation sequence separate from that of the selectable marker polypeptide, characterized in that the coding sequence for the polypeptide of interest is downstream from the coding sequence for the selectable marker in said multicistronic transcription unit, and the nucleic acid sequence coding for the selectable marker polypeptide comprises a mutation that decreases the translation efficiency of the selectable marker in a eukaryotic host cell. The invention also provides methods for obtaining host cells expressing a polypeptide of interest, said host cells comprising the DNA molecules of the invention.
    Type: Application
    Filed: November 7, 2005
    Publication date: August 3, 2006
    Applicant: Chromagenics B.V.
    Inventors: Arie Otte, Henricus van Blokland, Theodorus Kwaks, Richard Sewalt
  • Publication number: 20060010506
    Abstract: The present invention relates to the production of proteins in a cell or host cell. The invention uses a TRAnscription Pause (TRAP) sequence to enhance a protein expression characteristic of a protein expression unit. The TRAP sequence is thought to prevent, at least in part, formation of antisense RNA or to, at least in part, prevent transcription to enter the protein expression unit. In one embodiment, the invention provides a method for expression of at least one protein of interest in a cell comprising providing the cell with at least one protein expression unit that comprises a promoter functionally linked to an open reading frame encoding at least one protein of interest, characterized in that the protein expression unit further comprises at least one TRAP sequence and wherein the TRAP sequence is functionally located downstream of the open reading frame and at least in part prevents formation of antisense RNA.
    Type: Application
    Filed: June 20, 2005
    Publication date: January 12, 2006
    Applicant: Chromagenics B. V.
    Inventors: Arie Otte, Henricus Blokland
  • Publication number: 20060003416
    Abstract: Described are means and methods for providing a cell with a protein expression unit, the method comprising providing a nucleic acid sequence comprising the unit with a nucleic acid sequence encoding a binding site for a member of a chromatin modification system for rendering chromatin more accessible for transcription (opener), wherein the opener is present in the cell. Preferred openers comprise histone modification proteins, chromatin remodeling proteins and trithorax group proteins or equivalents. The cells thus generated and nucleic acid sequences encoding such openers are provided. Openers are preferred in the context of STAR and TRAP sequences.
    Type: Application
    Filed: June 20, 2005
    Publication date: January 5, 2006
    Applicant: Chromagenics B. V.
    Inventors: Arie Otte, Theodorus Kwaks, Richard Bernardus Sewalt
  • Patent number: 6949632
    Abstract: The subject invention provides compounds useful as fluorogenic substrates for the hydrolytic enzymes. Upon hydrolysis of the hydrolyzable group, a halo-pyrene substituted molecule is developed which is highly fluorescent, water soluble and exhibits several desirable characteristics, including a large Stokes' shift.
    Type: Grant
    Filed: August 27, 2002
    Date of Patent: September 27, 2005
    Assignee: Chromagen, Inc.
    Inventors: Michael J. Conrad, Liyan He
  • Patent number: 6872524
    Abstract: The invention relates to a method of detecting a DNA sequence which at least partially contributes to promote the stable expression of a gene. To this end the DNA fragment to be examined is cloned in a vector between i) a DNA sequence involved in the induction of gene transcription repressing chromatin, and ii) a reporter gene. The invention also relates to a DNA sequence to be detected by means of the invention, and the application of a stable expression-enhancing DNA sequence for the stable expression of a gene.
    Type: Grant
    Filed: August 16, 1999
    Date of Patent: March 29, 2005
    Assignee: ChromaGenics B.V.
    Inventor: Arie Otte
  • Publication number: 20040046956
    Abstract: A fluorescence spectrophotometer having an excitation double monochromator, a coaxial excitation/emission light transfer module, and an emission double monochromator. Each monochromator includes a pair of holographic concave gratings mounted to precisely select a desired band of wavelengths from incoming broadband light without using other optical elements, such as mirrors. Selected excitation light is directed into a sample well by a light transfer module that includes a coaxial excitation mirror positioned to direct excitation light directly to the bottom of a well of a multi-well plate. Fluorescence emission light that exits the well opening is collected by a relatively large coaxial emission mirror. The collected emission light is wavelength selected by the emission double monochromator. Selected emission light is detected by a photodetector module.
    Type: Application
    Filed: September 8, 2003
    Publication date: March 11, 2004
    Applicant: Chromagen, Inc.
    Inventors: Gene Gould, Michael J. Conrad
  • Patent number: 6654119
    Abstract: A fluorescence spectrophotometer having an excitation double monochromator, a coaxial excitation/emission light transfer module, and an emission double monochromator. Each monochromator includes a pair of holographic concave gratings mounted to precisely select a desired band of wavelengths from incoming broadband light without using other optical elements, such as mirrors. Selected excitation light is directed into a sample well by a light transfer module that includes a coaxial excitation mirror positioned to direct excitation light directly to the bottom of a well of a multi-well plate. Fluorescence emission light that exits the well opening is collected by a relatively large coaxial emission mirror. The collected emission light is wavelength selected by the emission double monochromator. Selected emission light is detected by a photodetector module.
    Type: Grant
    Filed: April 20, 2000
    Date of Patent: November 25, 2003
    Assignee: Chromagen, Inc.
    Inventors: Gene Gould, Michael J. Conrad
  • Patent number: 6635435
    Abstract: The subject invention provides compounds useful as fluorogenic substrates. Upon hydrolysis of a hydrolyzable group, a halo-pyrene substituted molecule is developed which is highly fluorescent, water soluble and exhibits several desirable characteristics, including a large Stokers' shift.
    Type: Grant
    Filed: July 9, 1999
    Date of Patent: October 21, 2003
    Assignee: Chromagen, Inc.
    Inventors: Michael J. Conrad, Liyan He
  • Patent number: 6268132
    Abstract: Structural analogs of the six non-fluorescentN-nucleosides commonly found in RNA and DNA, which are inherently fluorescent under physiological conditions, are identified and methods for their preparation provided. Such analogs may be incorporated into DNA and/or RNA oligonucleotides via either enzymatic or chemical synthesis to produce fluorescent oligonucleotides having prescribed sequences. Such analogous sequences may be identical to, or the analogous complement of, template or target DNA or RNA sequences to which the fluorescent oligonucleotides can be hybridized. Methods of preparing either RNA or DNA oligonucleotide probes of the invention, intermediates used in such methods, and methods of using the probes of the invention in oligonucleotide amplification, detection, identification, and/or hybridization assays are also provided.
    Type: Grant
    Filed: March 13, 1998
    Date of Patent: July 31, 2001
    Assignee: Chromagen, Inc.
    Inventor: Michael J. Conrad
  • Patent number: 5763167
    Abstract: Structural analogs of the six non-fluorescent N-nucleosides commonly found in RNA and DNA, which are inherently fluorescent under physiological conditions, are identified and methods for their preparation provided. Such analogs may be incorporated into DNA and/or RNA oligonucleotides via either enzymatic or chemical synthesis to produce fluorescent oligonucleotides having prescribed sequences. Such analogous sequences may be identical to, or the analogous complement of, template or target DNA or RNA sequences to which the fluorescent oligonucleotides can be hybridized. Methods of preparing either RNA or DNA oligonucleotide probes of the invention, intermediates used in such methods, and methods of using the probes of the invention in oligonucleotide amplification, detection, identification, and/or hybridization assays are also provided.
    Type: Grant
    Filed: March 21, 1994
    Date of Patent: June 9, 1998
    Assignee: Chromagen
    Inventor: Michael J. Conrad
  • Patent number: 5728525
    Abstract: Structural analogs of the six non-fluorescent N-nucleosides commonly found in RNA and DNA, which are inherently fluorescent under physiological conditions, are identified and methods for their preparation provided. Such analogs may be incorporated into DNA and/or RNA oligonucleotides via either enzymatic or chemical synthesis to produce fluorescent oligonucleotides having prescribed sequences. Such analogous sequences may be identical to, or the analogous complement of, template or target DNA or RNA sequences to which the fluorescent oligonucleotides can be hybridized. Methods of preparing either RNA or DNA oligonucleotide probes of the invention, intermediates used in such methods, and methods of using the probes of the invention in oligonucleotide amplification, detection, identification, and/or hybridization assays are also provided.
    Type: Grant
    Filed: June 2, 1995
    Date of Patent: March 17, 1998
    Assignee: Chromagen, Inc.
    Inventor: Michael J. Conrad