Patents Assigned to Deepcell, Inc.
  • Publication number: 20250218201
    Abstract: In some examples, a method includes using a machine learning encoder to extract respective sets of machine learning (ML)-based features from respective images of cells that are dying and unstained. Cells of a first subset are at a first state of dying, and cells of a second subset are at a second state of dying. The method may include using a computer vision encoder to extract respective sets of cell morphometric features from the respective images. The method may include using the respective sets of ML-based features and the respective sets of cell morphometric features to generate respective multi-dimensional feature vectors that represent respective cell phenotypes. The method may include using the respective multi-dimensional feature vectors to correlate, to the first state of dying or to the second state of dying, a phenotypic difference between the cells of the first subset and the cells of the second subset.
    Type: Application
    Filed: April 29, 2024
    Publication date: July 3, 2025
    Applicant: DEEPCELL, INC.
    Inventors: Anastasia MAVROPOULOS, Cristian L. LUENGO HENDRIKS, Senzeyu ZHANG, Ryan C. CARELLI, Kevin B. JACOBS
  • Publication number: 20250191680
    Abstract: In some examples, a method of processing includes using a machine learning encoder to extract respective sets of machine learning (ML)-based features from respective images of viable, unstained cells. Cells of a first subset of the cells have a first genetic edit, and cells of a second subset of the cells lack the first genetic edit. The method may include using a computer vision encoder to extract respective sets of cell morphometric features from the respective images. The method may include using the respective sets of ML-based features and the respective sets of cell morphometric features to generate respective multi-dimensional feature vectors that represent respective cell phenotypes. The method may include using the respective multi-dimensional feature vectors to correlate, to the first genetic edit, a phenotypic difference between the cells of the first subset and the cells of the second subset.
    Type: Application
    Filed: April 29, 2024
    Publication date: June 12, 2025
    Applicant: DEEPCELL, INC.
    Inventors: Stéphane C. BOUTET, Andreja JOVIC, Ryan C. CARELLI
  • Publication number: 20240153289
    Abstract: The present disclosure provides systems and methods for classifying and sorting a cell. The method can comprise processing image data of cells to generate a cell morphology map comprising a plurality of morphologically-distinct clusters corresponding to different types or states of the cells. The method can comprise using a classifier to automatically classify a cellular image sample based on its proximity, correlation, or commonality with one or more of the morphologically-distinct clusters.
    Type: Application
    Filed: February 17, 2022
    Publication date: May 9, 2024
    Applicant: DEEPCELL, INC.
    Inventors: Mahdokht Masaeli, Mahyar Salek
  • Patent number: 11815507
    Abstract: The present disclosure provides systems and methods for sorting a cell. The system may comprise a flow channel configured to transport a cell through the channel. The system may comprise an imaging device configured to capture an image of the cell from a plurality of different angles as the cell is transported through the flow channel. The system may comprise a processor configured to analyze the image using a deep learning algorithm to enable sorting of the cell.
    Type: Grant
    Filed: February 11, 2021
    Date of Patent: November 14, 2023
    Assignee: Deepcell, Inc.
    Inventors: Mahdokht Masaeli, Mahyar Salek, Hou-Pu Chou, Soroush Kahkeshani, Prashast Khandelwal, Syed Tariq Shafaat
  • Patent number: 11015165
    Abstract: The present disclosure provides systems and methods for sorting a cell. The system may comprise a flow channel configured to transport a cell through the channel. The system may comprise an imaging device configured to capture an image of the cell from a plurality of different angles as the cell is transported through the flow channel. The system may comprise a processor configured to analyze the image using a deep learning algorithm to enable sorting of the cell.
    Type: Grant
    Filed: October 15, 2020
    Date of Patent: May 25, 2021
    Assignee: Deepcell, Inc.
    Inventors: Mahdokht Masaeli, Mahyar Salek, Hou-Pu Chou, Soroush Kahkeshani
  • Publication number: 20210032588
    Abstract: The present disclosure provides systems and methods for sorting a cell. The system may comprise a flow channel configured to transport a cell through the channel. The system may comprise an imaging device configured to capture an image of the cell from a plurality of different angles as the cell is transported through the flow channel. The system may comprise a processor configured to analyze the image using a deep learning algorithm to enable sorting of the cell.
    Type: Application
    Filed: October 15, 2020
    Publication date: February 4, 2021
    Applicant: Deepcell, Inc.
    Inventors: Mahdokht MASAELI, Mahyar SALEK, Hou-Pu CHOU, Soroush KAHKESHANI
  • Patent number: 10808219
    Abstract: The present disclosure provides systems and methods for sorting a cell. The system may comprise a flow channel configured to transport a cell through the channel. The system may comprise an imaging device configured to capture an image of the cell from a plurality of different angles as the cell is transported through the flow channel. The system may comprise a processor configured to analyze the image using a deep learning algorithm to enable sorting of the cell.
    Type: Grant
    Filed: April 3, 2020
    Date of Patent: October 20, 2020
    Assignee: Deepcell, Inc.
    Inventors: Mahdokht Masaeli, Mahyar Salek, Hou-Pu Chou, Soroush Kahkeshani
  • Patent number: 10611995
    Abstract: The present disclosure provides systems and methods for sorting a cell. The system may comprise a flow channel configured to transport a cell through the channel. The system may comprise an imaging device configured to capture an image of the cell from a plurality of different angles as the cell is transported through the flow channel. The system may comprise a processor configured to analyze the image using a deep learning algorithm to enable sorting of the cell.
    Type: Grant
    Filed: November 16, 2018
    Date of Patent: April 7, 2020
    Assignee: Deepcell, Inc.
    Inventors: Mahdokht Masaeli, Mahyar Salek, Hou-Pu Chou, Soroush Kahkeshani