Abstract: A method and system is provided for the analysis of a human subject's brain wave activity on a statistical basis using a digital computer. The location of portions of the subject's brain and the location of at least 32, and for example 265, external scalp sensors are digitally recorded and stored in computer memory. The subject receives a set of stimuli which evoke brain waves (evoked potential EP or evoked magnetic fields EF) which, along with the location data, are statistically analyzed to indicate the brain sites giving rise to the activity. The brain site activity, and the time interrelationships of brain waves as they progress between brain sites, are displayed on a three-dimensional model or other three-dimensional perspective display.