Patents Assigned to Generation Biotech
  • Publication number: 20240026421
    Abstract: The invention relates to methods for capturing a polynucleotide comprising a DNA target segment from a population of polynucleotide molecules. The method may use a mixture comprising the population of the polynucleotide molecules, one or more polynucleotide primers, nucleotides, biotinylated nucleotides, a polymerase enzyme and a buffered liquid medium. The method may denature the polynucleotide molecules in the mixture so as to create single stranded portions of the polynucleotide molecules which can be accessible to the polynucleotide primers; hybridizing the polynucleotide primers to the polynucleotide comprising the DNA target segment. The method may create an extended polynucleotide primer by using the nucleotides, the biotinylated nucleotides and the polymerase enzyme as a means for labeling with biotin and increasing the extent of hybridization of the extended polynucleotide primer to the polynucleotide comprising the DNA target segment.
    Type: Application
    Filed: July 11, 2023
    Publication date: January 25, 2024
    Applicant: Generation Biotech, LLC
    Inventors: Johannes Dapprich, Karl P. Dresdner, Jr., Richard R. McKay
  • Patent number: 11821023
    Abstract: The invention relates to methods for capturing a polynucleotide comprising a DNA target segment from a population of polynucleotide molecules using a rotation of a magnetic field to move streptavidin-labeled magnetic beads relative to a buffered liquid medium to increase the probability of capturing and preventing damage to a long polynucleotide comprising a DNA target segment. The methods may use a rotation of the magnetic field relative to the mixture or a rotation of the mixture relative to the magnetic field for causing magnetic bead rotation in the buffered liquid medium and increasing the binding of biotinylated nucleotides of an extended polynucleotide primer to streptavidin-labeled magnetic beads, and winding or condensation of a polynucleotide onto the streptavidin-labeled magnetic beads to prevent damage to the long polynucleotide comprising a DNA target segment.
    Type: Grant
    Filed: May 29, 2019
    Date of Patent: November 21, 2023
    Assignee: GENERATION BIOTECH, LLC
    Inventors: Johannes Dapprich, Karl P. Dresdner, Jr., Richard R. McKay
  • Publication number: 20200080130
    Abstract: The invention relates to methods for capturing a polynucleotide comprising a DNA target segment from a population of polynucleotide molecules. The method may use a mixture comprising the population of the polynucleotide molecules, one or more polynucleotide primers, nucleotides, biotinylated nucleotides, a polymerase enzyme and a buffered liquid medium. The method may denature the polynucleotide molecules in the mixture so as to create single stranded portions of the polynucleotide molecules which can be accessible to the polynucleotide primers; hybridizing the polynucleotide primers to the polynucleotide comprising the DNA target segment. The method may create an extended polynucleotide primer by using the nucleotides, the biotinylated nucleotides and the polymerase enzyme as a means for labeling with biotin and increasing the extent of hybridization of the extended polynucleotide primer to the polynucleotide comprising the DNA target segment.
    Type: Application
    Filed: May 29, 2019
    Publication date: March 12, 2020
    Applicant: Generation Biotech, LLC
    Inventors: Johannes Dapprich, Karl P. Dresdner, JR., Richard R. McKay
  • Patent number: 9103827
    Abstract: An automated protein preparation technology that may use magnetic microparticles to isolate proteins in their native state from specific genomic loci of interest via the chromatin to which they are bound is described. After extraction, the targeted proteins may be purified for downstream analysis by quantitative mass spectrometry or ELISA. The identification of DNA-bound proteins, histones and their post-translational modification is of high scientific and pharmaceutical importance due to the role of DNA-binding proteins in the cauzation and development of human disease; in particular, cancer.
    Type: Grant
    Filed: November 10, 2011
    Date of Patent: August 11, 2015
    Assignees: The Trustees of Princeton University, Generation Biotech
    Inventors: Johannes Dapprich, Benjamin Garcia, Gary Leroy
  • Patent number: 8465925
    Abstract: The present invention provides methods and compositions for sequence-specific isolation of polynucleotide molecules from nucleic acid populations and subsequent amplification of isolated polynucleotide molecules or fragments thereof.
    Type: Grant
    Filed: April 4, 2008
    Date of Patent: June 18, 2013
    Assignees: Generation Biotech, LLC, GenoVision Inc., QIAGEN GmbH
    Inventors: Johannes Dapprich, Nancy Murphy, Christian Korfhage
  • Publication number: 20090263798
    Abstract: The invention is directed to methods to identify the location in a genome of a nonfixed or multicopy genomic element using microarrays or sequencing.
    Type: Application
    Filed: May 14, 2007
    Publication date: October 22, 2009
    Applicants: Generation Biotech, LLC, Rutgers, the State University, Princeton University
    Inventors: Johannes Dapprich, Abram Gabriel, Maitreya Dunham
  • Publication number: 20090047674
    Abstract: The present invention provides methods and compositions for sequence-specific isolation of polynucleotide molecules from nucleic acid populations and subsequent amplification of isolated polynucleotide molecules or fragments thereof.
    Type: Application
    Filed: April 4, 2008
    Publication date: February 19, 2009
    Applicants: Generation Biotech, LLC, GenoVision Inc., QIAGEN GmbH
    Inventors: Johannes Dapprich, Nancy Murphy, Christian Korfhage
  • Publication number: 20080090733
    Abstract: Provided are methods for selectively identifying and isolating nucleic acids in a population of nucleic acid molecules.
    Type: Application
    Filed: March 13, 2007
    Publication date: April 17, 2008
    Applicants: Generation Biotech, LLC, Trustees of Princeton University
    Inventors: Johannes Dapprich, Michele Cleary
  • Publication number: 20060040300
    Abstract: The present invention provides methods and compositions for sequence-specific isolation of polynucleotide molecules from nucleic acid populations and subsequent amplification of isolated polynucleotide molecules or fragments thereof.
    Type: Application
    Filed: August 9, 2005
    Publication date: February 23, 2006
    Applicants: Generation Biotech, LLC, GenoVision Inc., QIAGEN GmbH
    Inventors: Johannes Dapprich, Nancy Murphy, Christian Korfhage