Abstract: A two-stage pulse tube refrigerator comprises a pressure wave generator-compressor, first stage and second stage regenerators, first stage and second stage pulse tubes, heat exchangers and a hybrid phase shift mechanism for the first and second stage pulse tubes. The second stage phase shift mechanism includes double fixed orifices while the first stage shifter is an arrangement including one of a) 4 valves, b) 5 valves c) 2 active buffers or d) 3 active buffers. The double fixed orifice phase shifter is located either at room temperature or is thermally connected with the first stage cold end. Two-stage pulse tube refrigerators with a hybrid phase shifter have increased second stage regenerator performance at lower temperature. Pressure drop through the valves and compressor power consumption are decreased, and losses from phase interaction between each stage are eliminated.