Abstract: Methods and compositions for the detection and quantification of nucleic acids are provided. In certain embodiments, methods involve the use of cleavable probes that comprise a ribonucleotide position that is susceptible to endoribonuclease (e.g., RNase H) cleavage in the presence of target nucleic acid molecules. Probes of the embodiments may also comprise non-natural nucleotide linked to a reporter and/or quenching moiety.
Type:
Grant
Filed:
August 11, 2015
Date of Patent:
May 29, 2018
Assignee:
LUMINEX CORPORATION
Inventors:
Scott C. Johnson, Nicolas Arab, Doug Whitman
Abstract: An apparatus and method for image normalization using a Gaussian residual of fit selection criteria. The method may include acquiring a two-dimensional image of a plurality of particles, where the plurality of particles comprises a plurality of calibration particles, and identifying a calibration particle by correlating a portion of the image corresponding to the calibration particle to a mathematical model (e.g. Gaussian fit). The measured intensity of the calibration particle may then be used to normalize the intensity of the image.
Abstract: Methods and compositions for the detection and quantification of nucleic acids are provided. In one embodiment, a sample is contacted with a primer complementary to a first region of a target nucleic acid and a probe complementary to a second region of the target nucleic acid downstream of the first region under conditions suitable for hybridization of the target nucleic acid with the primer and the probe. The probe in this embodiment comprises a fluorophore and is attached to a solid support. The hybridized probe is cleaved with a nucleic acid polymerase having exonuclease activity to release the reporter from the solid support. The presence of the target nucleic acid is then detected and optionally quantified by detecting a decrease in signal from the reporter on the solid support.
Abstract: Methods and apparatuses for tracking and correlating particles include an optical detector that captures a first and a second image of the particles. A video detector is used to capture a plurality of video frames of the particles. The video detector captures the video frames of the particles at a rate faster than the rate at which images are captured by the optical detector to track the movement of particles. A first image position of a particle in the first image of the particles is identified, and then the first image position of the particle is correlated to a second image position of the particle in the second image using the plurality of video frames.
Abstract: A parallel processing system for processing samples is described. In one embodiment, the parallel processing system includes an instrument interface parallel controller to control a tray motor driving system, a close-loop heater control and detection system, a magnetic particle transfer system, a reagent release system, a reagent pre-mix pumping system and a wash buffer pumping system.
Type:
Application
Filed:
December 12, 2017
Publication date:
April 12, 2018
Applicant:
LUMINEX CORPORATION
Inventors:
Steve Jia Chang YU, Jesus CHING, Phillip You Fai LEE, David Hsiang HU
Abstract: Portable systems for processing and analyzing biological or environmental samples as well as different configurations of chip-based flow cytometers are provided. The portable systems include an automated assay preparation module configured to process a sample into a fluid assay with fluorescently tagged particles and a microfluidic analysis module coupled to the fluid assay module, wherein the microfluidic analysis module includes a chip-based flow cytometer.
Type:
Application
Filed:
September 29, 2017
Publication date:
April 12, 2018
Applicant:
LUMINEX CORPORATION
Inventors:
Adam Richard SCHILFFARTH, William R. DEICHER, John C. CARRANO, Jesse C. PHILLIPS
Abstract: An apparatus includes a housing, a reaction vial and a transfer mechanism. The housing defines a first flow path and a second flow path. The housing has transfer port defining an opening in fluid communication with the second flow path and a volume outside of the housing. The transfer port includes a flow control member to limit flow through the opening. The reaction vial is coupled to the housing and defines a reaction volume, which is in fluid communication with the transfer port via the second flow path. The transfer mechanism is configured to transfer a sample from an isolation chamber of an isolation module to the reaction chamber via at least the first flow path when the transfer mechanism is actuated. The transfer mechanism configured to produce a vacuum in the reaction vial to produce a flow of a sample from the isolation chamber to the reaction volume.
Type:
Grant
Filed:
December 18, 2015
Date of Patent:
April 3, 2018
Assignee:
LUMINEX CORPORATION
Inventors:
Jesus Ching, Phillip You Fai Lee, Bruce Richardson
Abstract: Apparatuses for preparing a sample are disclosed herein. The apparatuses include a chamber, a first valve at least partially disposed in the first chamber, a second valve at least partially disposed in the first chamber, and a pump comprising an actuator and nozzle.
Type:
Application
Filed:
October 25, 2017
Publication date:
February 15, 2018
Applicant:
LUMINEX CORPORATION
Inventors:
Jesus CHING, David Hsiang HU, Steve Jia Chang YU, Phillip You Fai LEE
Abstract: A parallel processing system for processing samples is described. In one embodiment, the parallel processing system includes an instrument interface parallel controller to control a tray motor driving system, a close-loop heater control and detection system, a magnetic particle transfer system, a reagent release system, a reagent pre-mix pumping system and a wash buffer pumping system.
Type:
Grant
Filed:
July 25, 2017
Date of Patent:
January 2, 2018
Assignee:
LUMINEX CORPORATION
Inventors:
Steve Jia Chang Yu, Jesus Ching, Phillip You Fai Lee, David Hsiang Hu
Abstract: Apparatuses for preparing a sample are disclosed herein. The apparatuses include a chamber, a first valve at least partially disposed in the first chamber, a second valve at least partially disposed in the first chamber, and a pump comprising an actuator and nozzle.
Type:
Grant
Filed:
March 10, 2017
Date of Patent:
November 28, 2017
Assignee:
LUMINEX CORPORATION
Inventors:
Jesus Ching, David Hsiang Hu, Steve Jia Chang Yu, Phillip You Fai Lee
Abstract: A parallel processing system for processing samples is described. In one embodiment, the parallel processing system includes an instrument interface parallel controller to control a tray motor driving system, a close-loop heater control and detection system, a magnetic particle transfer system, a reagent release system, a reagent pre-mix pumping system and a wash buffer pumping system.
Type:
Application
Filed:
July 25, 2017
Publication date:
November 9, 2017
Applicant:
LUMINEX CORPORATION
Inventors:
Steve Jia Chang YU, Jesus CHING, Phillip You Fai LEE, David Hsiang HU
Abstract: Lyophilized biological reagents, such as enzymes (e.g., PCR reagents) and antibodies, are provided that include a wax component. Thus, in some aspects, a method is provided for storing a biological reagent comprising formulating the reagent into a lyophilized composition including a wax component. Methods for using such lyophilized reagents are likewise provided.
Abstract: Methods and compositions for the detection and quantification of nucleic acids are provided. In certain embodiments, methods involve the use of cleavable probes that comprise a ribonucleotide position that is susceptible to endoribonuclease (e.g., RNase H) cleavage in the presence of target nucleic acid molecules. Probes of the embodiments may also comprise non-natural nucleotide linked to a reporter and/or quenching moiety.
Type:
Application
Filed:
July 21, 2017
Publication date:
November 9, 2017
Applicant:
LUMINEX CORPORATION
Inventors:
Scott C. JOHNSON, Nicolas ARAB, Doug WHITMAN
Abstract: Portable systems for processing and analyzing biological or environmental samples as well as different configurations of chip-based flow cytometers are provided. The portable systems include an automated assay preparation module configured to process a sample into a fluid assay with fluorescently tagged particles and a microfluidic analysis module coupled to the fluid assay module, wherein the microfluidic analysis module includes a chip-based flow cytometer.
Type:
Grant
Filed:
May 17, 2007
Date of Patent:
November 7, 2017
Assignee:
LUMINEX CORPORATION
Inventors:
Adam Richard Schilffarth, William R. Deicher, John C. Carrano, Jesse C. Phillips
Abstract: Methods and compositions for the detection and quantification of nucleic acids are provided. In certain embodiments, methods involve the use of primers or probes that comprise a non-natural nucleotide linked to a reporter. Target nucleic acids are detected by the polymerization of a complementary probe or primer that incorporated a cognate non-natural nucleotide linked to a quencher.
Type:
Application
Filed:
April 28, 2017
Publication date:
October 19, 2017
Applicant:
LUMINEX CORPORATION
Inventors:
Doug WHITMAN, Nicolas ARAB, Chuck COLLINS
Abstract: Methods, storage mediums, and systems for image data processing are provided. Embodiments for the methods, storage mediums, and systems include configurations to perform one or more of the following steps: background signal measurement, particle identification using classification dye emission and cluster rejection, inter-image alignment, inter-image particle correlation, fluorescence integration of reporter emission, and image plane normalization.
Abstract: Systems configured to isolate particles in a fluid assay are disclosed. Methods for collecting a sample of magnetic particles from a liquid are also disclosed. In certain embodiments, the disclosed systems and methods include a magnetic actuator coupled to a chassis, where the magnetic actuator comprises at least one shielded rotatable magnet.
Abstract: A parallel preceding system for processing samples is described. In one embodiment, the parallel processing system includes an instrument interface parallel controller to control a tray motor driving system, a close-loop heater control and detection system, a magnetic particle transfer system, a reagent release system, a reagent pre-mix pumping system and a wash buffer pumping system.
Type:
Grant
Filed:
August 10, 2016
Date of Patent:
August 29, 2017
Assignee:
LUMINEX CORPORATION
Inventors:
Steve Jia Chang Yu, Jesus Ching, Phillip You Fai Lee, David Hsiang Hu
Abstract: Macroporous beads and a method of manufacturing and using such macroporous beads. wherein the beads are distinguishable for use in a multiplex assay. Preferably, the beads are distinguishable by two or more unique fluorochromes, and at least some of the beads are magnetically responsive. In a preferred form, some of the macroporous beads have interior pores with a different moiety from the exterior surface, allowing beads with different attached functional groups.
Abstract: The present invention provides methods and systems for real-time measurements of PCR with multiplexing capability. Certain embodiments relate to methods and systems that use fluorescently encoded superparamagnetic microspheres for the immobilization of amplification products during the PCR process, and an imaging chamber of a measurement device that is also capable of controllable thermal cycling for assisting the PCR process.