Patents Assigned to Lygos, Inc.
  • Patent number: 12637680
    Abstract: Provided herein are systems and methods for the production of malonic acid or a salt thereof in recombinant host cells.
    Type: Grant
    Filed: August 31, 2020
    Date of Patent: May 26, 2026
    Assignee: Lygos, Inc.
    Inventors: Jeffrey Dietrich, Andrew Conley, Christine Carle, Nathan Mih, Chang-ting Chen, Shuchi Desai, Ee-been Goh, Poh Teng
  • Patent number: 12590268
    Abstract: Provided herein are compositions and methods comprising polysuccinimides, polyaspartic acid and salts thereof, wherein the polysuccinimides, polyaspartic acid and salts thereof are of renewable or non-petrochemical origin.
    Type: Grant
    Filed: April 18, 2023
    Date of Patent: March 31, 2026
    Assignee: Lygos, Inc.
    Inventor: Eric Steen
  • Publication number: 20250333686
    Abstract: Methods and materials related to producing glyceric acid and downstream products are disclosed. Specifically, isolated nucleic acids. polypeptides, host cells, methods and materials for producing glycolic acid by direct fermentation from sugars are disclosed.
    Type: Application
    Filed: November 26, 2024
    Publication date: October 30, 2025
    Applicant: Lygos, Inc.
    Inventors: Jeffrey A. Dietrich, Mario Ouellet, Johan van Walsem
  • Publication number: 20250269366
    Abstract: Provided herein is a process of ion exchange comprising malonic acid or a salt thereof and a cation or an anion cation exchange resin. The ion exchange is accomplished, e.g., and without limitation by continuous ion exchange. A valve and resin bed configuration is useful in this regard. The malonic acid separated by ion exchange is esterified, e.g., by Fisher esterification by using an acid and an alcohol.
    Type: Application
    Filed: September 20, 2021
    Publication date: August 28, 2025
    Applicant: LYGOS, INC.
    Inventors: Nicholas Ohler, Johan Van Walsem, Chi Le, Kelvin Shing, Daniel Blackburn, Owen Budavich
  • Patent number: 12188008
    Abstract: Methods and materials related to producing glyceric acid and downstream products are disclosed. Specifically, isolated nucleic acids, polypeptides, host cells, methods and materials for producing glycolic acid by direct fermentation from sugars are disclosed.
    Type: Grant
    Filed: February 18, 2019
    Date of Patent: January 7, 2025
    Assignee: Lygos, Inc.
    Inventors: Jeffrey A. Dietrich, Mario Ouellet, Johan van Walsem
  • Publication number: 20240360096
    Abstract: Provided herein are processes and compositions comprising substituted resorcylic acid or substituted resorcinols.
    Type: Application
    Filed: April 1, 2022
    Publication date: October 31, 2024
    Applicant: LYGOS, INC.
    Inventors: Nick Ohler, Owen Budavich, Jason Poulos, Camille Indey
  • Patent number: 12043860
    Abstract: Exemplary embodiments provided herein include genetically engineering microorganisms, such as yeast or bacteria, to produce cannabinoids by inserting genes that produce the appropriate enzymes for the metabolic production of a desired compound.
    Type: Grant
    Filed: April 1, 2022
    Date of Patent: July 23, 2024
    Assignee: Lygos, Inc.
    Inventors: Jason L. Poulos, Anthony N. Farina
  • Publication number: 20240191216
    Abstract: Systems and methods for the production of malonate in recombinant host cells.
    Type: Application
    Filed: March 20, 2023
    Publication date: June 13, 2024
    Applicant: LYGOS, INC.
    Inventors: Jeffrey A. Dietrich, Jeffrey L. Fortman, Eric J. Steen
  • Publication number: 20240167063
    Abstract: Methods and materials related to producing isobutyric acid are disclosed. Specifically, isolated nucleic acids, polypeptides, host cells, methods and materials for producing isobutyric by direct microbial fermentation from a carbon source are disclosed.
    Type: Application
    Filed: May 8, 2023
    Publication date: May 23, 2024
    Applicant: LYGOS, INC.
    Inventors: Jeffrey DIETRICH, Mario OUELLET, Andrew Jonathan CONLEY
  • Patent number: 11680280
    Abstract: Methods and materials related to producing isobutyric acid are disclosed. Specifically, isolated nucleic acids, polypeptides, host cells, methods and materials for producing isobutyric by direct microbial fermentation from a carbon source are disclosed.
    Type: Grant
    Filed: January 9, 2019
    Date of Patent: June 20, 2023
    Assignee: LYGOS, INC.
    Inventors: Jeffrey Dietrich, Mario Ouellet, Andrew Jonathan Conley
  • Patent number: 11597951
    Abstract: Methods for the preparation of bio-based malonic acid and diester derivatives of malonic acid are provided. For example, a dialkyl malonate may be prepared by the steps of (i) separating calcium malonate crystals from a fermentation broth; (ii) obtaining dissolved malonic acid; (iii) crystallizing the dissolved malonic acid; and (iv) performing esterification to obtain the dialkyl malonate. The disclosed methods produce diester derivatives of malonic acid with fewer impurities, which is useful for many industrial processes. The diester derivatives of malonic acid can be purified from existing sources of malonic acid, or from malonic acid made from a renewable carbon source.
    Type: Grant
    Filed: February 12, 2019
    Date of Patent: March 7, 2023
    Assignee: LYGOS, INC.
    Inventors: Jeffrey A. Dietrich, Eric Steen, Johan van Walsem
  • Patent number: 11390891
    Abstract: Methods and materials related to producing D-lactic acid are disclosed. Specifically, isolated synthetic or natural nucleic acids, synthetic or natural polypeptides, host cells, and methods and materials for producing D-lactic acid by direct fermentation from carbon sources are disclosed, along with methods of preparing D-lactic acid polymers.
    Type: Grant
    Filed: April 11, 2019
    Date of Patent: July 19, 2022
    Assignee: Lygos, Inc.
    Inventors: Jeffrey A. Dietrich, Mario Ouellet, Andrew Jonathan Conley
  • Patent number: 11326191
    Abstract: A process for the preparation of bio-based malonic acid and crystalline calcium malonate is provided. The calcium malonate is highly pure and provides a source of malonic acid made from a renewable carbon source rather than existing processes which rely on the use of petroleum-based products. The calcium malonate provides an improved source of malonic acid, which is important to many industrial processes.
    Type: Grant
    Filed: November 14, 2017
    Date of Patent: May 10, 2022
    Assignee: Lygos, Inc.
    Inventors: Eric Steen, Jeffrey Dietrich, Johan Van Walsem
  • Patent number: 11268112
    Abstract: Provided herein are recombinant fungal or bacterial cells comprising a heterologous L-lactate dehydrogenase, and processes of preparing L-lactic acid employing such cells.
    Type: Grant
    Filed: April 11, 2019
    Date of Patent: March 8, 2022
    Assignee: Lygos, Inc.
    Inventors: Andrew Jonathan Conley, Mario Ouellet, Jeffrey A. Dietrich
  • Patent number: 11248215
    Abstract: Systems and methods for the production of malonate in recombinant host cells.
    Type: Grant
    Filed: October 7, 2019
    Date of Patent: February 15, 2022
    Assignee: Lygos, Inc.
    Inventors: Jeffrey A. Dietrich, Jeffrey L. Fortman, Eric J. Steen
  • Patent number: 10472653
    Abstract: Systems and methods for the production of malonate in recombinant host cells.
    Type: Grant
    Filed: June 19, 2017
    Date of Patent: November 12, 2019
    Assignee: Lygos, Inc.
    Inventors: Jeffrey A. Dietrich, Jeffrey L. Fortman, Eric J. Steen
  • Publication number: 20190284585
    Abstract: A process for the preparation of bio-based malonic acid and crystalline calcium malonate is provided. The calcium malonate is highly pure and provides a source of malonic acid made from a renewable carbon source rather than existing processes which rely on the use of petroleum-based products. The calcium malonate provides an improved source of malonic acid, which is important to many industrial processes.
    Type: Application
    Filed: November 14, 2017
    Publication date: September 19, 2019
    Applicant: LYGOS, INC.
    Inventors: Eric Steen, Jeffrey Dietrich, Johan Van Walsem
  • Patent number: 10385368
    Abstract: Compositions and methods for producing malonate in recombinant host cells in order to increase malonate titer, yield, and/or productivity are provided. Recombinant host cells comprising nucleic acids encoding MAE1 transport proteins that increase production of malonate by the host cell and vectors for expressing MAE1 transport proteins that increase production of malonate by the host cell are also disclosed.
    Type: Grant
    Filed: June 24, 2015
    Date of Patent: August 20, 2019
    Assignee: Lygos, Inc.
    Inventor: Jeffrey A. Dietrich
  • Publication number: 20180258437
    Abstract: Recombinant host cells, materials, and methods for the biological production of L-aspartate and/or beta-alanine under substantially anaerobic conditions.
    Type: Application
    Filed: May 10, 2018
    Publication date: September 13, 2018
    Applicant: Lygos, Inc.
    Inventor: Jeffrey A. Dietrich
  • Publication number: 20170362614
    Abstract: Systems and methods for the production of malonate in recombinant host cells.
    Type: Application
    Filed: June 19, 2017
    Publication date: December 21, 2017
    Applicant: Lygos, Inc.
    Inventors: Jeffrey A. Dietrich, Jeffrey L. Fortman, Eric J. Steen