Abstract: Provided is a method and system for analysing images of a retina captured by an Optical Coherence Tomography (OCT) scanner. In some examples, an image of a retina of a patient from an OCT scanner is received; boundaries between layers are segmented for each of the pixels; the layers are determined using the segmented boundaries; regions of pathology are segmented for each of the pixels; a location of the regions of pathology are determined with respect to the determined layers using the segmented regions; the regions of pathology are determined using the segmented regions and the determined location of the regions; a property of the regions of pathology are determined using the segmented regions; results of determinations of the regions of pathology and the property of the regions to derive an assessment are analysed; and the assessment are output.