Abstract: A data processing system includes a data processing arrangement, wherein the data processing arrangement includes computing hardware for executing one or more software products, wherein execution of the one or more software products configures the data processing arrangement to access data from a file system arrangement.

Abstract: A data processing system includes a data processing arrangement, wherein the data processing arrangement includes computing hardware for executing one or more software products, wherein execution of the one or more software products configures the data processing arrangement to access data from a file system arrangement.

Abstract: Techniques for generating output genomics data. The techniques include: receiving a genome sequence read comprising at least one sequence of bases and associated quality scores; and processing the genome sequence read to generate the output genomics data at least in part by: performing a search of the at least one sequence of bases in a reference genome corpus comprising n-mers from a reference genome, based upon a similarity criterion; calculating an adjustment for one or more of the associated quality scores, based upon results of the search, the adjustment calculation for a quality score associated with a base in the genome sequence read utilising a Bayesian estimation of a likelihood of a sequencing error at the base given the sequence of the read, the Bayesian estimation utilising the results of the search; and adjusting one or more of the associated quality scores according to the calculated adjustment.

Abstract: A method of structuring data in a virtual file system, includes using the file system to apply specific handling of data that represents genomic sequence information or information that is related to genomic sequences. The method also concerns portioning the data into a collection of storage devices that have different cost and performance characteristics, wherein the splitting policy is based on a cost model. The method is executable by employing a computing device functioning under software control.

Abstract: A method of structuring data in a virtual file system, includes using the file system to apply specific handling of data that represents genomic sequence information or information that is related to genomic sequences. The method also concerns portioning the data into a collection of storage devices that have different cost and performance characteristics, wherein the splitting policy is based on a cost model. The method is executable by employing a computing device functioning under software control.