Patents Assigned to Presidents and Fellows of Harvard College
  • Publication number: 20140199731
    Abstract: The present invention generally relates to droplets and/or emulsions, such as multiple emulsions. In some cases, the droplets and/or emulsions may be used in assays, and in certain embodiments, the droplet or emulsion may be hardened to form a gel. In some aspects, a heterogeneous assay can be performed using a gel. For example, a droplet may be hardened to form a gel, where the droplet contains a cell, DNA, or other suitable species. The gel may be exposed to a reactant, and the reactant may interact with the gel and/or with the cell, DNA, etc., in some fashion. For example, the reactant may diffuse through the gel, or the hardened particle may liquefy to form a liquid state, allowing the reactant to interact with the cell. As a specific example, DNA contained within a gel particle may be subjected to PCR (polymerase chain reaction) amplification, e.g., by using PCR primers able to bind to the gel as it forms. As the DNA is amplified using PCR, some of the DNA will be bound to the gel via the PCR primer.
    Type: Application
    Filed: February 4, 2014
    Publication date: July 17, 2014
    Applicant: President and Fellows of Harvard College
    Inventors: Jeremy Agresti, Liang-Yin Chu, David A. Weitz, Jin-Woong Kim, Amy Rowat, Morten Sommer, Gautam Dantas, George Church
  • Publication number: 20140199284
    Abstract: Provided herein are diagnostic markers and methods for identifying a subject having an increased susceptibility for developing or having dilated cardiomyopathy. The method comprises determining if the subject has a mutation in the TTN nucleic as acid or titin polypeptide. Further provided herein are methods of treating subjects having or at risk of having dilated cardiomyopathy.
    Type: Application
    Filed: April 11, 2012
    Publication date: July 17, 2014
    Applicants: PRESIDENT AND FELLOWS OF HARVARD COLLEGE, THE BRIGHAM AND WOMEN'S HOSPITAL, INC.
    Inventors: Jonathan G. Seidman, Christine E. Seidman, Daniel E. Herman
  • Publication number: 20140199764
    Abstract: Described herein are microfluidic modules and methods for making the same, wherein the microfluidic modules include a substrate comprising at least one ether-based, aliphatic polyurethane, and at least one fluidic element disposed therein. The ether-based aliphatic polyurethane can be either the substrate of the microfluidic modules or a coating of another substrate material, such that at least a portion of the ether-based, aliphatic polyurethane is in fluid communication. In one embodiment, the ether-based, aliphatic polyurethane includes dicyclohexylmethane-4,4?-diisocyanate. As the ether-based aliphatic polyurethane can decrease absorption of molecules, e.g., hydrophobic molecules, in such microfluidic modules, the microfluidic modules described herein can be used in various applications such as drug screening and fluorescent microscopy.
    Type: Application
    Filed: May 8, 2012
    Publication date: July 17, 2014
    Applicant: PRESIDENT AND FELLOWS OF HARVARD COLLEGE
    Inventors: Karel Domansky, Daniel C. Leslie, Geraldine A. Hamilton, Anthony Bahinski, Donald E. Ingber
  • Publication number: 20140194314
    Abstract: Multi-color CL images of nanoparticle samples may be generated, by irradiating with a scanning electron beam a nanoparticle sample that containing a plurality of spectrally distinct optical emitters configured to generate CL light at respective different color channels, then detecting the CL light from the nanoparticles to generate multi-color NP-CL images of the nanoparticle sample. In some embodiments, SE (secondary electron) images of the sample may be acquire, substantially simultaneously with the acquisition of the CL images, so as to generate correlative NP-CL and SE images of the nanoparticle sample. In some embodiments, the nanoparticles may be surface-functionalized so that the nanoparticles selectively bind only to particular structures of interest.
    Type: Application
    Filed: June 13, 2012
    Publication date: July 10, 2014
    Applicant: President And Fellows of Harvard College
    Inventors: Ronald Walsworth, Jeff Lichtman, Narayanan Kasthuri, David Glenn, Huiliang Zhang, Richard Schalek
  • Publication number: 20140191752
    Abstract: Methods and systems are described for spectral decomposition of composite solid-state spin environments through quantum control of electronic spin impurities. ? sequence of spin-control modulation pulses are applied to the electronic spin impurities in the solid-state spin systems. The spectral content of the spin bath that surrounds the electronic spin impurities within the solid-state spin system is extracted, by measuring the coherent evolution and associated decoherence of the spin impurities as a function of number of the applied modulation pulses, and the time-spacing between the pulses. Using these methods, fundamental properties of the spin environment such as the correlation times and the coupling strengths for both electronic and nuclear spins in the spin bath, can be determined.
    Type: Application
    Filed: June 13, 2012
    Publication date: July 10, 2014
    Applicant: President And Fellows Of Harvard College
    Inventors: Ronald Walsworth, Linh My Pham, Nir Bar-Gill, Chinmay Belthangady
  • Publication number: 20140193488
    Abstract: The invention provides compositions and methods for utilizing scaffolds in cancer vaccines.
    Type: Application
    Filed: June 4, 2012
    Publication date: July 10, 2014
    Applicant: PRESIDENT AND FELLOWS OF HARVARD COLLEGE
    Inventors: Jaeyun Kim, David J. Mooney, Weiwei Aileen Li, Praveen Arany, Or Gadish
  • Publication number: 20140190833
    Abstract: There is provided a nanopore disposed in a support structure, with a fluidic connection between a first fluidic reservoir and an inlet to the nanopore and a second fluidic connection between a second fluidic reservoir and an outlet from the nanopore first ionic solution of a first buffer concentration is disposed in the first reservoir and a second ionic solution of a second buffer concentration, different than the first concentration, is disposed in the second reservoir, with the nanopore providing the sole path of fluidic communication between the first and second reservoirs. An electrical connection is disposed at a location in the nanopore sensor that develops an electrical signal indicative of electrical potential local to at least one site in the nanopore sensor as an object translocates through the nanopore between the two reservoirs.
    Type: Application
    Filed: April 29, 2011
    Publication date: July 10, 2014
    Applicant: PRESIDENT AND FELLOWS OF HARVARD COLLEGE
    Inventors: Charles M. Lieber, Ping Xie
  • Patent number: 8772049
    Abstract: Screening assays and methods of performing such assays are provided. In certain examples, the assays and methods may be designed to determine whether or not two or more species can associate with each other. In some examples, the assays and methods may be used to determine if a known antigen binds to an unknown monoclonal antibody.
    Type: Grant
    Filed: August 6, 2013
    Date of Patent: July 8, 2014
    Assignee: President and Fellows of Harvard College
    Inventors: J. Christopher Love, Hidde L. Ploegh, Jehnna Ronan
  • Patent number: 8771950
    Abstract: Compositions and methods for making a plurality of probes for analyzing a plurality of nucleic acid samples are provided. Compositions and methods for analyzing a plurality of nucleic acid samples to obtain sequence information in each nucleic acid sample are also provided.
    Type: Grant
    Filed: August 7, 2008
    Date of Patent: July 8, 2014
    Assignee: President and Fellows of Harvard College
    Inventors: George M. Church, Kun Zhang, Joseph Chou
  • Publication number: 20140187444
    Abstract: The invention relates to methods and products for modulating glycosylation of proteins. The invention is useful for identifying therapeutic compounds to treat glycosylation-associated disorders such as neurodegeneration, diabetes, including complications of diabetes such as insulin resistance, nephropathy, microvascular damage, and endothelial dysfunction. The invention is also useful for identifying therapeutic compounds to treat de-glycosylation-associated disorders such as ischemic damage and traumatic injury. The invention also relates in part to assays that are useful for identifying and testing candidate compounds for modulating glycosylation of proteins and also relates in part to compounds to treat glycosylation-associated diseases and disorders.
    Type: Application
    Filed: August 29, 2013
    Publication date: July 3, 2014
    Applicant: President and Fellows of Harvard College
    Inventors: Benjamin J. Gross, Suzanne Walker Kahne, Jonathan G. Swoboda
  • Publication number: 20140186325
    Abstract: The present invention relates to methods of preventing or treating cancer through the use of agents that enhance the activity or expression of SIRT4.
    Type: Application
    Filed: June 7, 2012
    Publication date: July 3, 2014
    Applicant: President and Fellows of Harvard College
    Inventors: Marcia C. Haigis, Seungmin Jeong
  • Publication number: 20140187666
    Abstract: A self-healing, scratch resistant slippery surface that is manufactured by wicking a chemically-inert, high-density liquid coating over a roughened solid surface featuring micro and nanoscale topographies is described. Such a slippery surface shows anti-wetting properties, as well as exhibits significant reduction of adhesion of a broad range of biological materials, including particles in suspension or solution. Specifically, the slippery surfaces can be applied to medical devices and equipment to effectively repel biological materials such as blood, and prevent, reduce, or delay coagulation and surface-mediated clot formation. Moreover, the slippery surfaces can be used to prevent fouling by microorganisms such as bacteria.
    Type: Application
    Filed: January 19, 2012
    Publication date: July 3, 2014
    Applicant: President and Fellows of Harvard College
    Inventors: Joanna Aizenberg, Benjamin Hatton, Donald Ingber, Michael Super, Tak Sing Wong
  • Publication number: 20140186399
    Abstract: The invention relates to vaccine compositions having a carrier protein and an antigen of interest entrapped in a complex, methods of making such vaccines, and methods of vaccine administration.
    Type: Application
    Filed: December 27, 2013
    Publication date: July 3, 2014
    Applicant: President and Fellows of Harvard College
    Inventor: John J. MEKALANOS
  • Publication number: 20140183059
    Abstract: The multiplexed electrochemical microfluidic paper-based analytical device comprises multiple detection zones for the detection of multiple biochemical analytes from one single sample. Cavity valves integrated on the device will deliver the sample to different detection zones. These analytes include, but are not limited to, urea, creatinine, creatine, glucose, lactate, ethanol, uric acid, cholesterol, pyruvate, creatinine, ?-hydroxybutyrate, alanine aminotrasferase, aspartate aminotransferase, alkaline phosphatase, and acetylcholinesterase (or its inhibitors). This system will provide a simple and low-cost POC approach to obtain quantitative and multiple biological information from one sample (e.g. one drop of blood).
    Type: Application
    Filed: March 6, 2014
    Publication date: July 3, 2014
    Applicant: PRESIDENT AND FELLOWS OF HARVARD COLLEGE
    Inventors: George M. WHITESIDES, Xiujun LI, Frederique DEISS, Zhihong NIE, Xinyu LIU
  • Publication number: 20140186414
    Abstract: The technology described herein is directed to methods and devices that can be used to induce functional organ structures to form within an implantation device by implanting it in vivo within the body of a living animal, and allowing cells and tissues to impregnate the implantation device and establish normal microenvironmental architecture and tissue-tissue interfaces. Then the contained cells and tissues can be surgically removed intact and either transplanted into another animal or maintained ex vivo by perfusing it through one or more of the fluid channels with medium and/or gases necessary for cell survival.
    Type: Application
    Filed: May 31, 2012
    Publication date: July 3, 2014
    Applicants: CHILDREN'S MEDICAL CENTER CORPORATION, PRESIDENT AND FELLOWS OF HARVARD COLLEGE
    Inventors: Donald E. Ingber, Yusuke Torisawa, Geraldine Hamilton, Akiko Mammoto, Tadanori Mammoto, Catherine Spina
  • Publication number: 20140184196
    Abstract: The present invention generally relates to nanotechnology, including field effect transistors and other devices used as sensors (for example, for electrophysiological studies), nanotube structures, and applications. Certain aspects of the present invention are generally directed to transistors such as field effect transistors, and other similar devices. In one set of embodiments, a field effect transistor is used where a nanoscale wire, for example, a silicon nanowire, acts as a transistor channel connecting a source electrode to a drain electrode. In some cases, a portion of the transistor channel is exposed to an environment that is to be determined, for example, the interior or cytosol of a cell. A nanotube or other suitable fluidic channel may be extended from the transistor channel into a suitable environment, such as a contained environment within a cell, so that the environment is in electrical communication with the transistor channel via the fluidic channel.
    Type: Application
    Filed: June 7, 2012
    Publication date: July 3, 2014
    Applicant: President and Fellows of Harvard College
    Inventors: Charles M. Lieber, Xiaojie Duan, Ruixuan Gao, Ping Xie, Xiaocheng Jiang
  • Patent number: 8765485
    Abstract: Various aspects of the present invention relates to the control and manipulation of fluidic species, for example, in microfluidic systems. In one aspect, the invention relates to systems and methods for making droplets of fluid surrounded by a liquid, using, for example, electric fields, mechanical alterations, the addition of an intervening fluid, etc. The invention also relates to systems and methods for fusing droplets according to another aspect of the invention, for example, through charge and/or dipole interactions. In some cases, the fusion of the droplets may initiate or determine a reaction. In still another aspect, the invention relates to systems and methods for sorting droplets, e.g., by causing droplets to move to certain regions within a fluidic system. Examples include using electrical interactions (e.g., charges, dipoles, etc.) or mechanical systems (e.g., fluid displacement) to sort the droplets.
    Type: Grant
    Filed: February 23, 2006
    Date of Patent: July 1, 2014
    Assignee: President and Fellows of Harvard College
    Inventors: Darren Roy Link, David A. Weitz, Galder Cristobal-Azkarate, Zhengdong Cheng, Keunho Ahn
  • Publication number: 20140178298
    Abstract: The present invention discloses a method for the enzyme-mediated, site-specific, in-vivo precipitation of a water soluble molecule in an animal. The enzyme is either unique to tumor cells, or is produced within a specific site (e.g., tumor) at concentrations that are higher than that in normal tissues. Alternatively, the enzyme is conjugated to a targeting moiety such as an antibody or a receptor-binding molecule.
    Type: Application
    Filed: December 9, 2013
    Publication date: June 26, 2014
    Applicant: PRESIDENT AND FELLOWS OF HARVARD COLLEGE
    Inventors: Amin I. Kassis, Ravi S. Harapanhalli
  • Publication number: 20140178370
    Abstract: The present invention provides methods and compositions for the treatment, prevention, or reduction of persistent infections, such as chronic infections, latent infections, and slow infections and cancer. The methods and compositions of the invention are also useful for the alleviation of one or more symptoms associated with such infections and cancer.
    Type: Application
    Filed: December 30, 2013
    Publication date: June 26, 2014
    Applicants: Emory University, President and Fellows of Harvard College, Brigham and Women's Hospital, Dana-Farber Cancer Institute, Inc.
    Inventors: Gordon Freeman, Arlene Sharpe, David M. Dorfman, Rafi Ahmed, Daniel Barber, E. John Wherry
  • Publication number: 20140179929
    Abstract: The tetracycline class of antibiotics has played a major role in the treatment of infectious diseases for the past 50 years. However, the increased use of the tetracyclines in human and veterinary medicine has led to resistance among many organisms previously susceptible to tetracycline antibiotics. The recent development of a modular synthesis of tetracycline analogs through a chiral enone intermediate has allowed for the efficient synthesis of novel tetracycline analogs never prepared before. The present invention provides a more efficient route for preparing the enone intermediate.
    Type: Application
    Filed: November 11, 2013
    Publication date: June 26, 2014
    Applicant: President and Fellows of Harvard College
    Inventors: Andrew G. Myers, Jason D. Brubaker