Abstract: Systems and methods are provided for obtaining raw mass spectrometry data from samples, extracting a subset of the raw mass spectrometry data based on storage characteristics of the computing system, storing the subset of the raw mass spectrometry data within a storage of the computing system, and transmitting the stored subset to a machine learning component.

Abstract: Systems and methods are provided for obtaining raw mass spectrometry data from samples, determining signals present across the samples, and separating the raw mass spectrometry data into discrete intervals in each of the samples. At each interval of the discrete intervals of the raw mass spectrometry data, a local highest intensity signal, relative to any other signal within each interval, is determined, and a frequency of occurrence of each local highest intensity signal across the samples is determined. A subset of local highest intensity signals is retrieved based on respective frequencies of occurrence of the local highest intensity signals. The subset of the local highest intensity signals is ingested into a machine learning model.

Abstract: Systems and methods are provided for obtaining raw mass spectrometry data from samples and generating an image representation of the mass spectrometry data. The image representation illustrates frequencies of occurrence of respective signals across the samples. A portion of the mass spectrometry data is obtained or extracted based on the frequencies. This portion is divided into segments. The segments correspond to different ranges or bins of retention times and mass-to-charge ratios. Veracities of signals within the segments are determined using a machine learning model. A subset of the segments that correspond to true signal is extracted. Mass-to-charge ratios and retention times corresponding to the subset of the segments are extracted.

Abstract: Systems and methods are provided for obtaining raw mass spectrometry data from samples, determining signals present across the samples, determining a bin value to apply to the filtered mass spectrometry data, and after determining the bin value, generating an image-based representation of the raw mass spectrometry data, wherein the image-based representation indicates frequencies of peak intensities in each bin.