Abstract: Certain embodiments of the invention provide systems and methods for the automated assembly of DNA sequence data into contiguous DNA segments using a computer a system. DNA sequence data is entered into the system. The system indexes and groups a plurality of DNA fragment reads utilizing an anchor sequence and consolidates the fragments into larger sequences by merging the fragment reads within a group.
Type:
Grant
Filed:
April 21, 2009
Date of Patent:
September 18, 2012
Assignee:
SoftGenetics LLC
Inventors:
Changsheng Jonathan Liu, Yiqiong Wu, Kevin Jay LeVan
Abstract: Certain embodiments of the invention provide systems and methods for the automated assembly of DNA sequence data into contiguous DNA segments using a computer a system. DNA sequence data is entered into the system. The system indexes and groups a plurality of DNA fragment reads utilizing an anchor sequence and consolidates the fragments into larger sequences by merging the fragment reads within a group.
Type:
Application
Filed:
April 21, 2009
Publication date:
December 24, 2009
Applicant:
SOFTGENETICS LLC
Inventors:
Changsheng Jonathan Liu, Yiqiong Wu, Kevin Jay LeVan