Patents Assigned to SWIFT BIOSCIENCES, INC.
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Patent number: 11279972Abstract: The present disclosure describes a method of adapter ligation to the ends of fragmented double-stranded DNA molecules.Type: GrantFiled: January 11, 2019Date of Patent: March 22, 2022Assignee: SWIFT BIOSCIENCES, INC.Inventors: Vladimir Makarov, Julie Laliberte
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Patent number: 11203781Abstract: Methods for performing multiplex PCR-based enrichment of a target substrate are provided. Systems and methods for generating a sequencing library are also provided.Type: GrantFiled: April 22, 2021Date of Patent: December 21, 2021Assignee: SWIFT BIOSCIENCES, INC.Inventors: Vladimir Makarov, Julie Laliberte
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Patent number: 11162135Abstract: Methods for performing multiplex PCR-based enrichment of a target substrate are provided. Systems and methods for generating a sequencing library are also provided.Type: GrantFiled: April 19, 2019Date of Patent: November 2, 2021Assignee: Swift Biosciences, Inc.Inventors: Vladimir Makarov, Julie Laliberte
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Patent number: 11118207Abstract: The present invention is directed to methods and compositions for adding tails of specific lengths to a substrate polynucleotide. The invention also contemplates methods and compositions for immobilization of tailed substrates to a solid support. The disclosure contemplates that the attenuator molecule is any biomolecule that associates with a tail sequence added to a substrate polynucleotide and controls the addition of a tail sequence to the 3? end of the substrate polynucleotide. The sequence that is added to the substrate polynucleotide is referred to herein as a tail sequence, or simply a tail, and the process of adding a nucleotide to a substrate polynucleotide is referred to herein as tailing.Type: GrantFiled: June 19, 2020Date of Patent: September 14, 2021Assignee: SWIFT BIOSCIENCES, INC.Inventors: Vladimir Makarov, Laurie Kurihara
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Patent number: 10961562Abstract: A bottleneck in the Next Generation Sequencing (NGS) workflow is the quantification of libraries for accurate pooling and loading of the sequencing instrument flow cell or chip. Disclosed herein are methods that improve performance and reduce time compared to existing methods.Type: GrantFiled: March 6, 2019Date of Patent: March 30, 2021Assignee: SWIFT BIOSCIENCES, INC.Inventors: Vladimir Makarov, Sergey Chupreta
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Patent number: 10731194Abstract: The present invention is directed to methods and compositions for adding tails of specific lengths to a substrate polynucleotide. The invention also contemplates methods and compositions for immobilization of tailed substrates to a solid support. The disclosure contemplates that the attenuator molecule is any biomolecule that associates with a tail sequence added to a substrate polynucleotide and controls the addition of a tail sequence to the 3? end of the substrate polynucleotide. The sequence that is added to the substrate polynucleotide is referred to herein as a tail sequence, or simply a tail, and the process of adding a nucleotide to a substrate polynucleotide is referred to herein as tailing.Type: GrantFiled: February 17, 2018Date of Patent: August 4, 2020Assignee: Swift Biosciences, Inc.Inventors: Vladimir Makarov, Laurie Kurihara
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Patent number: 10480030Abstract: The present invention provides a novel technology that involves improved primer design. These primer pairs have a wide range of applications and provide high sensitivity and specificity.Type: GrantFiled: November 27, 2013Date of Patent: November 19, 2019Assignee: SWIFT BIOSCIENCES, INC.Inventors: Vladimir Makarov, Sergey V. Chupreta
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Patent number: 10385388Abstract: The invention relates to polynucleotide combinations and their use in allele-specific enrichment, amplification, and detection. The disclosure also provides methods to multiplex various target DNA molecules in a single tube with high sensitivity and specificity. The disclosure provides a polynucleotide competitor that comprises a sequence that is fully complementary to a first target DNA polynucleotide region (T1) such that the competitor polynucleotide will hybridize to the first target DNA polynucleotide region under appropriate conditions. In another aspect, the polynucleotide competitor comprises a mismatch to a non-target DNA polynucleotide that is a sequence variant of the first target DNA polynucleotide region (T1*).Type: GrantFiled: December 5, 2014Date of Patent: August 20, 2019Assignee: SWIFT BIOSCIENCES, INC.Inventor: Vladimir Makarov
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Patent number: 10316357Abstract: Compositions and methods for enhanced adapter ligation are provided. The compositions and methods can be useful for next generation sequencing (NGS) library preparation and can result in higher yields in an NGS library.Type: GrantFiled: July 29, 2016Date of Patent: June 11, 2019Assignee: Swift Biosciences, Inc.Inventors: Vladimir Makarov, Julie Laliberte
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Patent number: 10316359Abstract: Methods for the preparation of PCR reaction mixtures and for performing multiplex PCR amplification which limit the production of non-target amplicons are provided. Production of non-target amplicons is limited because the non-target amplicons have complementary 5? and 3? ends as a result of the target-specific primer designs such that the non-target amplicons can form stable secondary structure during the annealing step.Type: GrantFiled: August 31, 2016Date of Patent: June 11, 2019Assignee: Swift Biosciences, Inc.Inventors: Vladimir Makarov, Julie Laliberte
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Patent number: 10208338Abstract: The present disclosure describes a method of adapter ligation to the ends of fragmented double-stranded DNA molecules.Type: GrantFiled: March 3, 2015Date of Patent: February 19, 2019Assignee: SWIFT BIOSCIENCES, INC.Inventors: Vladimir Makarov, Julie Laliberte
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Patent number: 9896709Abstract: The present invention is directed to methods and compositions for adding tails of specific lengths to a substrate polynucleotide. The invention also contemplates methods and compositions for immobilization of tailed substrates to a solid support. The disclosure contemplates that the attenuator molecule is any biomolecule that associates with a tail sequence added to a substrate polynucleotide and controls the addition of a tail sequence to the 3? end of the substrate polynucleotide. The sequence that is added to the substrate polynucleotide is referred to herein as a tail sequence, or simply a tail, and the process of adding a nucleotide to a substrate polynucleotide is referred to herein as tailing.Type: GrantFiled: March 13, 2013Date of Patent: February 20, 2018Assignee: SWIFT BIOSCIENCES, INC.Inventors: Vladimir Makarov, Laurie Kurihara
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Patent number: 8916362Abstract: A polynucleotide device is provided that adds one or more bases to a single stranded polynucleotide. Methods of using the device are provided, comprising contacting a single stranded target molecule with an extension reaction mixture comprising (i) a device or composition of the disclosure, (ii) a polymerase, and (iii) free nucleotides, whereupon an extension reaction product is generated. Kits comprising a device of the disclosure are also provided.Type: GrantFiled: November 23, 2010Date of Patent: December 23, 2014Assignee: Swift Biosciences, Inc.Inventor: Vladimir Makarov
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Patent number: 8889350Abstract: Methods of isolating target double-stranded polynucleotides with internal single-stranded regions are provided. Compositions and kits comprising double-stranded polynucleotides with internal single-stranded regions are also provided.Type: GrantFiled: March 28, 2011Date of Patent: November 18, 2014Assignee: Swift Biosciences, Inc.Inventor: Vladimir Makarov
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Publication number: 20140186844Abstract: The present disclosure provides a novel technology that involves improved primer design. These primer pairs have a wide range of applications and provide high sensitivity and specificity.Type: ApplicationFiled: April 26, 2012Publication date: July 3, 2014Applicant: SWIFT BIOSCIENCES, INC.Inventors: Vladimir Makarov, Laurie Kurihara, Anjali Mishra, Sergey V. Chupreta
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Publication number: 20140162263Abstract: The present invention provides a novel technology that involves improved primer design. These primer pairs have a wide range of applications and provide high sensitivity and specificity.Type: ApplicationFiled: November 27, 2013Publication date: June 12, 2014Applicant: SWIFT BIOSCIENCES, INC.Inventors: Vladimir Makarov, Sergey V. Chupreta
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Publication number: 20140038185Abstract: The present invention provides a novel technology that involves improved primer design. These primer pairs have a wide range of applications and provide high sensitivity and specificity.Type: ApplicationFiled: February 14, 2012Publication date: February 6, 2014Applicant: Swift Biosciences, Inc.Inventors: Vladimir Makarov, Sergey V. Chupreta
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Publication number: 20110288284Abstract: Methods of isolating target double-stranded polynucleotides with internal single-stranded regions are provided.Type: ApplicationFiled: March 28, 2011Publication date: November 24, 2011Applicant: SWIFT BIOSCIENCES, INC.Inventor: Vladimir Makarov
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Publication number: 20110269194Abstract: Materials and methods are provided for the gel-free fractionation of polynucleotide molecules. According to the present invention, fractionation is size-based or sequence-based.Type: ApplicationFiled: April 20, 2011Publication date: November 3, 2011Applicant: SWIFT BIOSCIENCES, INC.Inventor: VLADIMIR MAKAROV
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Publication number: 20110143401Abstract: A polynucleotide device is provided that add one or more bases to a single stranded polynucleotide. Methods of using the device and kits comprising the device are also provide.Type: ApplicationFiled: November 23, 2010Publication date: June 16, 2011Applicant: SWIFT BIOSCIENCES, INC.Inventor: Vladimir Makarov